Also see SNPversity: This tool allows you to query genotype data.
Simple Stock Search: This search form allows you to just enter basic name info to quickly retrieve the desired stock. below.
Tip: If you want to find stocks utilizing a specific variation, put the name of the variation in parentheses before you search. For example, (a1) will find variations of a1. Be sure to check the case-sensitive box if you want your search to be case sensitive.
Return to the matching Stock results.
Advanced Stock Query
You can use this form to create a more detailed stock query. Check the boxes for the filters you want to use, then click submit to see a table of the results.
Maize Genetics Cooperation Stock Center Resources
The Maize Genetics Cooperation Stock Center maintains an extensive collection of maize genetic stocks. MaizeGDB supports the Stock Center by providing interlinked stock information throughout our database, as well as reports and catalogues of Stock Center stocks, and the ability to order stocks or request more information directly from the Stock Center.
The primary portal to genetic stocks (germplasm) is distributed by the Maize Genetics Cooperation Stock Center, Urbana IL. Additional germplasm may also be accessed from this site, for example germplasm with molecular or phenotype data represented in MaizeGDB. Many of these non-mutant resources, may be requested from the North Central Regional Plant Introduction Station (NCRPRIS).
The Stock Center Catalog is an extensive categorized listing of the stocks available from the stock center.
A key for how to Decrypt Stock Packet Labels is often helpful for researchers unfamiliar with the Stock Center's labelling practices.
You may also sort lines from the Ames Diversity Panel based on IBS (Identity by State) score using the TYPSimSelector.
Search for and download Trait Values.
Search and Browse Phenotypes in Stock Collections
Stocks Distributed by the Maize Genetics Cooperation Stock Center
The Core COOP Collection
Browse catalog listingEMS Inflorescence Project Mutants (S Hake)
Query data centers (Stock, Phenotype, Allele, Locus.)
Quick search (top right box above the menu bar)
UniformMu (D McCarty). View UniformMu trakcs on the Genome Browser (B73_V2, B73_V3, W22_V2).
RescueMU (Walbot). Database with images from screenings for seed, seedling and adult stages
Ac/Ds/Ds-GFP (Dooner). Track on Genome Browser (B73_V2, B73_V3)
Stocks Distributed by Individual ProjectsSequence-tagged insertions Ac/Ds Brutnell & Vollbrecht. See track on Genome Browser (B73_V2, B73_V3)
Mu (Barkan). See track on Genome Browser (B73_V3, B73_V4)
GFP-tagged proteins (JCVI) Track on Genome Browser (B73_V2, B73_V3)
The maize NAM founders
The maize Nested Association Mapping (NAM) population was developed by the "Molecular
and Functional Diversity of the Maize Genome" project. The 26 diverse founder lines
are listed below. Reference:
Yu et al., 2008.
Stocks at MaizeGDB
Discussion of Stock Data for the General Public
What is a stock?
A stock is a sample of corn that expresses a specific variation (or a specific small set of variations). Thus, stocks are living examples of variation data.
Why store stock data?