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Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes

One month | Six months | One year | All time

New or updated genes since one month ago. The cutoff date is January 19th, 2019.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin		Gene
Model		Recent ReferenceOrthologsUpdate information
yesterdayrth2 roothair defective2: root hairs elongate 1/5-1/4 of normal; plants are vigorous and show little nutritional deficiency
5.04 - 5.09
    Klamer, F et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz011     Reference: February 18th, 2019
Variation: September 1st, 2003
yesterdayIDP232  :
2.02
 GRMZM5G876898
     Variation: March 31st, 2005
Gene Model: February 18th, 2019
yesterdayIDP2388  :
2.02
 GRMZM2G007914
     Variation: March 31st, 2005
Gene Model: February 18th, 2019
yesterdayIDP53  :
2.01
 GRMZM2G407347
     Gene Product: March 25th, 2010
Gene Model: February 18th, 2019
yesterdayIDP776  :
2.01
 GRMZM2G065012
     Variation: March 31st, 2005
Gene Model: February 18th, 2019
yesterdayrad51b recombination protein51 gene b: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
3.05
 GRMZM2G084762
 Liu, F et al. 2019. Int J Mol Sci 20:807     Reference: February 18th, 2019
Gene Product: August 12th, 2016
Variation: May 13th, 2012
Gene Model: June 19th, 2014
yesterdayrad51a recombination protein51 gene a: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
7.04
 GRMZM2G121543
 Liu, F et al. 2019. Int J Mol Sci 20:807     Reference: February 18th, 2019
Gene Product: August 12th, 2016
Variation: April 19th, 2012
Gene Model: June 19th, 2014
2 days agozim32 ZIM-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: February 17th, 2019
3 days agoIDP1478  :
1.11
 GRMZM2G001661
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP1633  :
1.11
 GRMZM2G004459
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agomagi24643  :
1.10
 GRMZM2G120596
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP2395  :
1.10
 GRMZM2G031870
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP2400  :
1.12
 GRMZM2G021642
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP340  :
1.09
 GRMZM2G042040
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP538  :
1.11
 GRMZM2G062289
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP603  :
1.11
 GRMZM2G024267
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agomagi62468  :
1.12
 GRMZM2G023242
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP72  :
1.11
 GRMZM5G878153
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP738  :
1.10
 GRMZM2G443453
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agoIDP772  :
1.11
 GRMZM2G477609
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 days agomagi7806  :
1.10
 GRMZM2G165619
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
4 days agocah6 carbonic anhydrase6: predicted beta carbonic anhydrase
8.06
 GRMZM2G094165
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Gene Model: July 31st, 2014
4 days agorbm48 RNA binding motif protein 48: Encodes a U12 splicing factor; mutants have a rough endosperm phenotype
 
 GRMZM2G163247
 Bai, F et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00754     Reference: February 15th, 2019
Gene Product: February 15th, 2019
Variation: February 15th, 2019
Gene Model: February 15th, 2019
4 days agocah2 carbonic anhydrase2: with cah1 promotes leaf CO2 availability for photosynthesis (Studer et al 2014)
 
 GRMZM2G348512
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Variation: May 25th, 2018
Gene Model: July 31st, 2014
4 days agorgh3 rough endosperm3: Mature rgh3 seeds show a rough, etched, or pitted endosperm surface as well as a reduced seed size
 
 GRMZM5G849788
 Bai, F et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00754     Reference: February 15th, 2019
Gene Product: December 29th, 2011
Variation: December 29th, 2011
Gene Model: April 29th, 2013
4 days agocah1 carbonic anhydrase1: C4 carbonic anhydrase; higher transcripts in mesophyll cells (Tausta 2014); double mutants with cah2 virutally remove this activity from leaf (Studer et al 2014).
 
 GRMZM2G121878
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Variation: May 25th, 2018
Gene Model: July 31st, 2014
4 days agocah4 carbonic anhydrase4: putative mitochondrial carbonic anhydrase (Studer et al 2014)
 
 GRMZM2G414528
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Gene Model: July 31st, 2014
4 days agocah5 carbonic anhydrase5: predicted mitochondrial carbonic anhydrase
 
 GRMZM2G145101
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 15th, 2019
Gene Product: August 5th, 2014
Gene Model: July 31st, 2014
4 days agoplt5 phospholipid transfer protein homolog5:
 
 GRMZM2G005991
 Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281     Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: February 15th, 2019
Gene Model: January 6th, 2017
4 days agoIDP2450  : similar to P-loop containing nucleoside triphosphate hydrolase-like protein of A. thaliana
1.10
 GRMZM5G837018
     Variation: March 31st, 2005
Gene Model: February 15th, 2019
4 days agoIDP352  :
1.08
 GRMZM2G015005
     Variation: March 31st, 2005
Gene Model: February 15th, 2019
4 days agoIDP437  :
1.09
 GRMZM2G038217
     Variation: May 12th, 2006
Gene Model: February 15th, 2019
4 days agoIDP630  :
1.08
 GRMZM2G092391
     Variation: February 15th, 2007
Gene Model: February 15th, 2019
5 days agorgh*-N802 roughN802: speckled kernel; floury pitted etched rough surface
3.05 - 3.09
    Neuffer, MG and England, DJ. 1995. MNL 69:43-46     Reference: September 1st, 2003
Variation: February 14th, 2019
5 days agoagal1 alpha-galactosidase1: Entrez Gene relates to alpha-galactosidase 1 (AGAL) of Arabidopsis
1.07
 GRMZM2G095126
 Beaumont, VH et al. 1996. Theor Appl Genet 93:606-612     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: February 14th, 2019
Gene Model: April 19th, 2016
5 days agoIDP1437a  : similar to protein PIR of A. thaliana (1S site)similar to small subunit ribosomal protein S19 of A. thaliana (1L site)
1.01
 GRMZM2G170567
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP1468  : similar to RNA polymerase Rpb6 of A. thaliana
1.08
 GRMZM2G013600
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP156  :
1.06
 GRMZM2G056122
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP174  :
1.07
 GRMZM5G877884
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP190  :
1.08
 GRMZM2G144782
     Variation: May 12th, 2006
Gene Model: February 14th, 2019
5 days agomagi32402  :
1.07
 GRMZM2G057608
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP1982  :
1.07
 GRMZM5G832380
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP243  :
1.07
 GRMZM2G152552
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP2492  :
1.07
 GRMZM2G135866
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP295  : similar to chitin elicitor receptor kinase 1 of A. thaliana
1.06
 GRMZM2G317770
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP512  :
1.08
 GRMZM2G124434
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP640  : similar to methionine aminopeptidase 1A of A. thaliana
1.07
 GRMZM2G113062
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP641  : similar to UDP-glucosyl transferase 85A2 of A. thaliana
1.07
 GRMZM2G373124
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP644  :
1.07
 GRMZM2G025855
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP669  :
1.08
 GRMZM2G064605
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP707  :
1.08
 GRMZM2G164018
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP716  : similar to thioredoxin family protein of A. thaliana
1.07
 GRMZM5G882446
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP790  :
1.06
 GRMZM2G068657
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP820  :
1.07
 GRMZM2G153208
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
5 days agoIDP856  :
1.07
 AC217910.3_FG004
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
6 days agosro2 similar to RCD one2:
 
 GRMZM5G866843
 Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Variation: February 13th, 2019
Gene Model: August 10th, 2018
6 days agoIDP1407  :
1.05
 GRMZM2G114356
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agomagi23951  :
1.04
 GRMZM2G330650
     Variation: September 25th, 2007
Gene Model: February 13th, 2019
6 days agoIDP1473  :
1.04
 GRMZM2G074138
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP1675  :
1.05
 GRMZM2G424181
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP182  :
1.04
 GRMZM2G115975
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP194  :
1.05
 GRMZM2G034372
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP1953  :
1.04
 GRMZM2G074946
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP1986  :
1.04
 GRMZM2G028302
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP2367  :
1.05
 GRMZM5G868757
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP2553  :
1.04
 GRMZM2G107473
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP34  :
1.05
 GRMZM2G167728
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP511  :
1.04
 GRMZM5G862467
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP739  :
1.04
 GRMZM2G009232
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP741  : similar to Lactoylglutathione lyase / glyoxalase I family protein of A. thaliana
1.06
 GRMZM2G067028
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP751  :
1.05
 GRMZM2G033478
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP752  : similar to putative protein phosphatase 2C 6 of A. thaliana
1.06
 GRMZM2G170299
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP839  :
1.04
 GRMZM2G039880
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agoIDP875  :
1.03
 GRMZM5G851485
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
6 days agomagi107220  :
1.04
 GRMZM2G172244
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
7 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
    Jia, SG et al. 2019. pp.doi: 10.1016/j.gpb.2018.02.003     Reference: February 12th, 2019
Gene Product: September 1st, 2003
Variation: June 6th, 2016
7 days agopdi9 protein disulfide isomerase9:
1.03
 GRMZM2G073628
 Jia, SG et al. 2019. pp.doi: 10.1016/j.gpb.2018.02.003     Reference: February 12th, 2019
Gene Product: September 1st, 2003
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
7 days agoAY106592  : similar to protein sodium-and lithium-tolerant 1 of A. thaliana
1.03
 GRMZM2G048482
     Variation: February 12th, 2019
Gene Model: February 12th, 2019
7 days agoAY110240  :
1.03
 GRMZM2G013957
     Variation: July 29th, 2004
Gene Model: February 12th, 2019
7 days agoIDP112  :
1.03
 GRMZM2G319781
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agolimtf1 LIM-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
 GRMZM2G128206
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP180  :
1.03
 GRMZM2G341309
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP329  :
1.03
 GRMZM2G049190
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP643  : similar to gamma-interferon-inducible lysosomal thiol reductase family protein of A. thaliana
1.03
 GRMZM2G307992
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP701  :
1.03
 GRMZM2G048703
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
7 days agoIDP92  :
1.03
 GRMZM2G049041
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 days agotrps2 trehalose-6-phosphate synthase2:
1.03
 GRMZM2G099860
 Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: September 15th, 2013
Gene Model: February 11th, 2019
8 days agolw2 lemon white2: like lw1
5.05
 GRMZM2G137409
 Zhang, LL et al. 2019. Plant Physiol pp.doi: 10.1104/pp.18.01148     Reference: February 8th, 2019
Gene Product: February 8th, 2019
Variation: February 11th, 2019
Gene Model: February 8th, 2019
8 days agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
    Khangura, RS et al. 2019. G3 9:375-390     Reference: February 11th, 2019
Gene Product: June 8th, 2007
Variation: March 17th, 2011
8 days agobnlg1429  :
1.02
        Variation: February 11th, 2019
8 days agoIDP1425  :
1.02
 GRMZM2G136081
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP2385  :
1.03
 GRMZM2G012501
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agomagi2762  :
1.02
 GRMZM2G172410
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP29  :
1.02
 GRMZM2G080586
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP343  : similar to vacuolar protein-sorting-associated protein 37-1 of A. thaliana
1.02
 GRMZM2G023575
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP622  :
1.02
 GRMZM2G009326
     Variation: March 12th, 2007
Gene Model: February 11th, 2019
8 days agoIDP810  :
1.02
 GRMZM2G164965
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP847  :
1.01
 GRMZM2G038485
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 days agoIDP871  : similar to RAB GTPase H1E of A. thaliana
1.02
 AC166636.1_FG008
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
9 days agoIDP1464  :
1.01
 GRMZM2G013634
     Variation: March 31st, 2005
Gene Model: February 10th, 2019
9 days agoIDP2420  :
1.01
 GRMZM2G176820
     Variation: March 31st, 2005
Gene Model: February 10th, 2019
9 days agoIDP553  :
1.01
 GRMZM2G176397
     Variation: March 31st, 2005
Gene Model: February 10th, 2019
9 days agoIDP658  :
1.02
 GRMZM2G070259
     Variation: May 13th, 2006
Gene Model: February 10th, 2019
9 days agoIDP755  : similar to D111/G-patch domain-containing protein of A. thaliana
1.01
 GRMZM2G089976
     Variation: March 31st, 2005
Gene Model: February 10th, 2019
10 days agopx14 peroxidase14:
2.03
 GRMZM2G108219
 Jin, B et al. 2019. PLoS One 14:e0211941     Reference: February 9th, 2019
Gene Product: September 18th, 2015
Variation: February 22nd, 2015
Gene Model: February 23rd, 2015
11 days agopza01089  : candidate modifier of Ga1-s expression (Hurst et al. 2019)
10.04
    Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: January 26th, 2019
11 days agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
    Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: June 22nd, 2005
11 days agoumc1454  : candidate modifier of Ga1-s expression (Hurst et al. 2019)
2.04
 AC235541.1_FG002
 Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: September 1st, 2003
Gene Model: February 21st, 2018
11 days agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
 GRMZM2G091819
 Bernardi, J et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.01.027     Reference: February 8th, 2019
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
12 days agosid1 sister of indeterminate spikelet1: inflorescence architecture, apparent target of tasselseed4 microRNA (Chuck et al 2008),
 
 GRMZM2G176175
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: February 27th, 2017
Variation: October 17th, 2014
Gene Model: October 16th, 2014
Recommended by Lisa Harper:
September 2nd, 2008
12 days agospi1 sparse inflorescence1: mutant tassels have fewer branches and spikelets, and its ears are small, with fewer kernels
3.08
 GRMZM2G025222
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: June 24th, 2011
Gene Model: April 24th, 2013
Recommended by Lisa Harper:
October 7th, 2008
12 days agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
 GRMZM5G862109
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: February 27th, 2017
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
12 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
 GRMZM2G700665
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: February 27th, 2017
Gene Model: November 20th, 2012
12 days agopebp1 phosphatidylethanolamine-binding protein1:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: November 17th, 2010
12 days agopebp2 phosphatidylethanolamine-binding protein2:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
12 days agopebp3 phosphatidylethanolamine-binding protein3:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
12 days agopebp7 phosphatidylethanolamine-binding protein7:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: June 19th, 2015
12 days agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
 GRMZM2G179264
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
12 days agopebp12 phosphatidylethanolamine-binding protein12:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 10th, 2010
12 days agopebp14 phosphatidylethanolamine-binding protein:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
12 days agopebp15 phosphatidylethanolamine-binding protein15:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
12 days agopebp18 phosphatidylethanolamine-binding protein18:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 13th, 2010
12 days agopebp26 phosphatidylethanolamine-binding protein26:
 
 GRMZM2G400167
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 14th, 2010
Gene Model: July 28th, 2016
12 days agogi1 gigantea1: homologous to Arabidopsis photoperiod gene gigantea
8.03
 GRMZM2G107101
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 19th, 2012
Variation: April 23rd, 2013
Gene Model: September 18th, 2012
12 days agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
 GRMZM5G844173
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
12 days agoba1 barren stalk1: ear shoots and most tassel branches and spikelets absent
3.06
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: July 19th, 2012
Variation: March 18th, 2015
12 days agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
 GRMZM2G307119
 Stephenson, E et al. 2019. PLoS One 14:e0203728   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene) 		Reference: February 7th, 2019
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
12 days agobif1 barren inflorescence1: dominant Bif1 plants have ear and tassel with many fewer spikelets, bare rachis appendages
8.03 - 8.03
 GRMZM2G130953
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 16th, 2015
Variation: October 16th, 2015
Gene Model: October 16th, 2015
12 days agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
 GRMZM2G064732
 Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
12 days agogl15 glossy15: glossy leaf surface expressed after 3rd leaf (aka gl4)
9.03
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: October 5th, 2012
12 days agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: April 11th, 2007
Variation: August 20th, 2010
12 days agora2 ramosa2: tassel many-branched, upright, not conical like ra1; irregular kernel placement
3.03 - 3.03
 AC233943.1_FG002
 Stephenson, E et al. 2019. PLoS One 14:e0203728   AT5G63090 (TAIR)
LOC_Os01g07480 (MSU/TIGR)
Os01g0169400 (Gramene) 		Reference: February 7th, 2019
Gene Product: July 27th, 2009
Variation: September 19th, 2009
Gene Model: July 14th, 2011
12 days agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
12 days agorel2 ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants
10.03
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 23rd, 2018
Variation: October 23rd, 2018
12 days agotsh4 tassel sheath4: tsh4 mutant tassels have one to five long tassel branches, instead of ~13 observed in non-mutant W22. In place of tassel branches, long bract leaves were present, clustered at the base of the tassel.
7.03
 GRMZM2G307588
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: October 6th, 2011
12 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
 GRMZM2G381691
 Stephenson, E et al. 2019. PLoS One 14:e0203728   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene) 		Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
12 days agobif4 barren inflorescence4: like Bif1; dominant plants have ear and tassel with many fewer spikelets, bare rachis appendage
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 16th, 2015
Variation: October 16th, 2015
12 days agohb48 Homeobox-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Tsuda, K, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00967     Reference: February 7th, 2019
Variation: April 7th, 2017
12 days agohb76 Homeobox-transcription factor 76: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Tsuda, K, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00967     Reference: February 7th, 2019
Variation: April 7th, 2017
12 days agosbp23 SBP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
12 days agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: December 17th, 2014
12 days agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: December 17th, 2014
12 days agotcptf15 TCP-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: November 2nd, 2014
12 days agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
 GRMZM2G101511
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
12 days agofea2 fasciated ear2: ear fasciated, broadened and flattened at the tip; rows irregular; similar to CLAVATA 2 of Arabidopsis thaliana
4.05
    Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: December 20th, 2004
Variation: February 11th, 2013
12 days agozmm15 Zea mays MADS-box 15:
5.01
 GRMZM2G553379
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: June 15th, 2018
Gene Model: June 15th, 2018
12 days agozfl1 zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
10.06
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 20th, 2007
12 days agozap1 zea apetala homolog1:
2.10
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 2nd, 2011
12 days agozmm31 Zea mays MADS31:
5.01
 GRMZM2G071620
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: August 7th, 2008
Gene Model: July 2nd, 2014
12 days agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: August 21st, 2018
Variation: February 6th, 2011
12 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 1st, 2003
Variation: April 15th, 2008
12 days agospt*-N1620B spottedN1620B:
4.03 - 4.05
    Neuffer, MG. 1995. Personal communication-mutant collection     Reference: September 1st, 2003
Variation: February 7th, 2019
12 days agozmm24 Zea mays MADS24:
1.10
 GRMZM2G087095
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 2nd, 2011
Gene Model: July 2nd, 2014
12 days agovt2 vanishing tassel2: inflorescence development; TRP-depenedent auxin synthesis
 
 GRMZM2G127308
 Stephenson, E et al. 2019. PLoS One 14:e0203728   AT1G70560 (TAIR) Reference: February 7th, 2019
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
12 days agofcp1 fon2-like cle protein1: mutants have a fasciated ear phenotype
 
 GRMZM2G165836
 Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001   LOC_Os04g39770 (MSU/TIGR)
Os04g0473800 (Gramene) 		Reference: February 7th, 2019
Gene Product: May 21st, 2016
Variation: May 22nd, 2016
Gene Model: May 21st, 2016
12 days agocrn1 coryne1: involved in shoot apical meristem (SAM) development; functions downstream of fea2; mutants develop fasciated ears
 
 GRMZM2G032132
 Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001   AT5G13290 (TAIR) Reference: February 7th, 2019
Gene Product: January 24th, 2013
Gene Model: May 21st, 2018
12 days agosbp29 SBP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
 GRMZM2G067624
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Gene Model: July 11th, 2018
12 days agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
 GRMZM2G098643
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: January 24th, 2013
12 days agogif1 growth-regulating-factor-interacting factor1: mutants are semi-dwarf with narrow leaves and fasciated inflorescence meristems
1.10
 GRMZM2G180246
 Zhang, D, et al. 2018. Plant Cell. 0:doi: 10.1105/tpc.17.00791   AT5G28640 (TAIR)
LOC_Os03g52320 (MSU/TIGR) 		Reference: February 7th, 2019
Gene Product: July 6th, 2015
Variation: February 6th, 2018
Gene Model: July 6th, 2015
12 days agoconz1 constans1: homologous to photoperiod genes constans (co) from Arabiodopsis and heading date 1 (hd1) in rice. (Miller 2008)
9.03
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: July 28th, 2008
13 days agocsu904  :
7.04
 GRMZM2G102786
     Variation: September 1st, 2003
Gene Model: February 6th, 2019
13 days agoIDP1466  :
7.06
 GRMZM2G133819
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP1611  :
7.05
 GRMZM2G427937
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP1673  :
7.05
 GRMZM2G148249
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP2594  :
7.04
 GRMZM2G382106
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP705  : similar to ATP synthase mitochondrial F1 complex assembly factor 2 of A. thaliana
7.05
 GRMZM2G003172
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
13 days agoIDP744  :
7.05
 GRMZM2G130398
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
14 days agocsu5a  : Was thp1, leaf cDNA csu5 reported similar to Vigna mungo sulfhydryl-endopeptidase; single copy. Not in Entrez neighbors May 1998. similar to cysteine proteinase-like protein of A. thaliana
7.04
 GRMZM2G036203
 Rixmann, C et al. 1992. in Heller, SR et al. 1992. Abstracts, Plant Genome I, San Diego, CA     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2019
14 days agoumc1333  : similar to formin-like protein 2 of A. thaliana
7.03
 GRMZM2G132486
     Variation: February 5th, 2019
Gene Model: February 5th, 2019
14 days agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
 GRMZM2G047486
 Borkiewicz, L et al. 2019. Physiol Plant pp.doi: 10.1111/ppl.12938     Reference: February 5th, 2019
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
14 days agoIDP1704  :
7.03
 GRMZM2G052336
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP1981  :
7.04
 GRMZM2G072054
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP2483  :
7.03
 GRMZM2G148864
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP2590  :
7.04
 GRMZM5G886969
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP727  : similar to xyloglucan:xyloglucosyl transferase of A. thaliana
7.03
 GRMZM2G413044
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP789  :
7.03
 GRMZM2G071015
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
14 days agoIDP865  :
7.03
 GRMZM2G085670
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
15 days agomagi99589  :
7.03
 GRMZM5G870752
     Variation: March 31st, 2005
Gene Model: February 4th, 2019
15 days agoIDP96  :
7.03
 GRMZM2G161302
     Variation: March 31st, 2005
Gene Model: February 4th, 2019
18 days agodek15 defective kernel15: collapsed floury endosperm; lethal; cultured embryos green
10.04 - 10.07
 GRMZM2G079796
 He, YH et al. 2019. Plant Cell pp.doi; 10.1105/tpc.18.00921     Reference: February 1st, 2019
Gene Product: February 1st, 2019
Variation: February 1st, 2019
Gene Model: February 1st, 2019
18 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Anand, A et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13089   LOC_Os1g67410 (MSU/TIGR) Reference: February 1st, 2019
Gene Product: February 27th, 2017
18 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Anand, A et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13089     Reference: February 1st, 2019
Gene Product: August 25th, 2017
19 days agotlk2 tousled-like protein kinase2:
5.01
    Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: February 15th, 2008
Variation: June 25th, 2015
19 days agoesp1 embryo specific protein1: late embryonic protein, induced by abscisic acid and osmotic stress; cDNA similar to other LEA proteinsortholog of wheat Em; protein and mRNA in embryo from 16 days after pollination
6.05
 AC233879.1_FG002
 Williams, BA and Tsang, A. 1991. Plant Mol Biol 16:919-923     Reference: September 1st, 2003
Gene Product: January 31st, 2019
Variation: September 1st, 2003
Gene Model: July 27th, 2016
19 days agobnlg1057  :
1.06
    Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Variation: September 1st, 2003
19 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
    Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Variation: October 5th, 2018
19 days agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
 GRMZM2G175265
 Tian, L et al. 2019. PLoS One 14:e0211623     Reference: January 31st, 2019
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: November 7th, 2018
19 days agomeg8 maternally expressed gene8:
 
 GRMZM2G123153
 Xiong, Y et al. 2014. BMC Plant Biology 14:204     Reference: August 29th, 2014
Variation: August 29th, 2014
Gene Model: January 31st, 2019
19 days agolhcb10 light harvesting chlorophyll a/b binding protein10: gene-specific cDNA probe; low expression in bundle sheath cells (aka cab1)unique genomic sequence; promoter is light regulated in tobacco and maize leaf mesophyll protoplasts (Knight et al. 1992)
 
 GRMZM2G351977
 Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: September 1st, 2003
Gene Model: August 3rd, 2018
19 days agolea14 late embryogenesis abundant protein14: appears to be involved in drought tolerance
 
 GRMZM2G050607
 Bui, MM et al. 2019. Agronomy 9:62     Reference: January 31st, 2019
Gene Product: January 31st, 2019
Gene Model: January 31st, 2019
19 days agorop5 Rho-related protein from plants 5:
9.01
 GRMZM2G102946
 Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: April 1st, 2004
Gene Model: January 1st, 2015
19 days agoAY109061  :
7.02
 GRMZM2G095562
     Variation: September 25th, 2007
Gene Model: January 31st, 2019
19 days agoAY108844  :
7.04
 GRMZM2G121022
     Variation: September 25th, 2007
Gene Model: January 31st, 2019
19 days agoIDP1643  :
7.02
 GRMZM2G032944
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agomagi14814  :
7.02
 GRMZM2G160770
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agoIDP353  :
7.02
 GRMZM2G054120
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agoIDP754  : similar to S-adenosylmethionine decarboxylase 1 beta chain of A. thaliana
7.02
 GRMZM2G461159
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agoIDP767  :
7.02
 GRMZM2G053927
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
19 days agoIDP84  :
7.02
 GRMZM2G022014
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
20 days agocybc7 cytochrome b-c1 complex subunit 7: encodes an important part of the mitochondrial electron transport chain that can suppress HR mediated by Rp1-D21 in a transient expression assay
 
 GRMZM2G318346
 He, YJ et al. 2019. Planta pp.doi: 10.1007/s00425-019-03092-8     Reference: January 30th, 2019
Gene Product: January 30th, 2019
Variation: January 30th, 2019
Gene Model: January 30th, 2019
20 days agoIDP1417  :
7.00
 GRMZM2G019200
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agoIDP1688  :
7.00
 AC205122.4_FG003
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
7.01
 GRMZM2G047954
 Huang, M et al. 2013. J Proteome Res 12:491-504     Reference: August 5th, 2014
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agoIDP336  : similar to ankyrin repeat and regulator of chromosome condensation (RCC1) domain-containing protein of A. thaliana
7.01
 GRMZM2G443668
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agoIDP497  :
7.01
 GRMZM2G060866
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
20 days agoIDP80  :
7.01
 GRMZM2G012324
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
22 days agoba2 barren stalk2: like ba1 except tassel is normal (original description from Emerson, Beadle and Fraser 1935)
2.04 - 2.05
 GRMZM2G399641
 Yao, H, et al. 2019. Molecular Plant. 0:doi: 10.1016/j.molp.2018.12.024     Reference: January 28th, 2019
Gene Product: January 26th, 2019
Variation: January 26th, 2019
Gene Model: January 26th, 2019
22 days agokwl1 kiwellin1: specifically blocks the catalytic activity of Ustilago maydis secreted fungal chorismate mutase Cmu1, by hindering substrate access to the active site
 
 GRMZM2G073114
 Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: January 22nd, 2019
Gene Model: January 21st, 2019
22 days agocmu3 chorismate mutase3:
 
 GRMZM2G028369
 Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: February 12th, 2014
Gene Model: January 21st, 2019
22 days agocmu2 chorismate mutase2: enzyme activity from protein raised in E coli
5.04
 GRMZM2G179454
 Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: February 12th, 2014
Gene Model: February 12th, 2014
25 days agoms30 male sterile30: like ms1
4.08
 GRMZM2G174782
 An, XL et al. 2019. Molecular Plant pp.doi: 10.1016/j.molp.2019.01.011     Reference: January 25th, 2019
Gene Product: January 25th, 2019
Variation: January 25th, 2019
Gene Model: January 25th, 2019
25 days agomagi104697  :
9.03
 GRMZM2G074085
     Variation: March 31st, 2005
Gene Model: January 25th, 2019
26 days agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
    Lu, Y et al. 2019. bioRxiv preprint pp.doi; 10.1101/529032     Reference: January 24th, 2019
Variation: January 24th, 2019
26 days agopme3 pectin methylesterase3: present and expressed only in Ga1-s genotypes; mutationally inactivated version present in Ga1-m
 
    Lu, Y et al. 2019. bioRxiv preprint pp.doi; 10.1101/529032     Reference: January 24th, 2019
Gene Product: September 10th, 2018
26 days agoIDP2364  :
9.02
 GRMZM2G008326
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP2406  :
9.03
 GRMZM2G110993
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP2554  :
9.07
 GRMZM2G169384
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP534  :
9.04
 GRMZM2G124567
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP809  :
9.04
 GRMZM5G842855
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
26 days agoIDP850  :
9.07
 AC149475.2_FG002
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
27 days agonta1 N-terminal amidase1: NCBI: CemA-like proton extrusion protein-related
9.08
 GRMZM2G110236
 Anderson, L, et al. 2004. Genetics. 166:1923-1933   At4g34090 (TAIR)
LOC_Os03g01920 (MSU/TIGR) 		Reference: February 12th, 2011
Variation: April 21st, 2017
Gene Model: January 23rd, 2019
27 days agonagk1 N-acetylglutamate kinase1: catalyzes the second step of arginine biosynthesis
2.03
 GRMZM2G132777
 Liu, WJ et al. 2019. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01902     Reference: January 23rd, 2019
Gene Product: January 23rd, 2019
Gene Model: January 23rd, 2019
27 days agoIDP1419  :
9.07
 GRMZM2G060564
     Variation: March 31st, 2005
Gene Model: January 23rd, 2019
27 days agoumc2558  :
9.04
 GRMZM2G020468
     Variation: January 22nd, 2019
Gene Model: January 23rd, 2019
28 days agoIDP2462  :
9.06
 GRMZM2G138589
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP248  : similar to homogentisate 1,2-dioxygenase of A. thaliana
9.03
 GRMZM2G154093
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP256  :
9.03
 GRMZM2G112951
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP2570  :
9.02
 GRMZM2G100873
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP300  :
9.04
 GRMZM2G005869
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP310  :
9.04
 GRMZM2G359070
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP375  :
9.03
 GRMZM2G034015
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP65  : similar to 60S ribosomal protein L23 of A. thaliana
9.07
 GRMZM2G171181
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP665  :
9.04
 AC225193.3_FG003
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP694  : similar to B12D protein of A. thaliana
9.00
 GRMZM2G027392
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP708  :
9.04
 GRMZM2G152417
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP717  :
9.03
 GRMZM2G097995
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
28 days agoIDP756  : similar to 40S ribosomal protein S15a-5 of A. thaliana
9.04
 GRMZM2G007103
     Variation: September 25th, 2007
Gene Model: January 22nd, 2019
28 days agoIDP760  :
9.01
 GRMZM2G152177
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
29 days agosun3 SUN domain protein3: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein
 
 GRMZM2G120262
 Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Gene Model: January 21st, 2019
Recommended by Hank (Henry) Bass:
April 19th, 2011

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