Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


One month | Six months | One year | All time

New or updated genes since one month ago. The cutoff date is August 22nd, 2017.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdaysh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   Guan, HY et al. 2017. Plant Growth Regulation pp.DOI: 10.1007/s10725-017-0309-9     Reference: September 21st, 2017
Gene Product: October 25th, 2006
Variation: September 21st, 2017
2 days agoa1 anthocyaninless1: colorless aleurone, green or brown plant; brown pericarp with P1-rr
3.09
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: April 11th, 2013
Variation: August 25th, 2010
2 days agoa2 anthocyaninless2: like a1, but red pericarp with P1-rr
5.03
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: June 7th, 2012
Variation: September 1st, 2003
2 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 1st, 2003
Variation: June 25th, 2015
2 days agobz2 bronze2: like bz1; anthers not fluorescent; an1-6923 mutation includes deletion for Bz2; encodes a glutathione S-transferase conjugating anthocyanins into the vacuole
1.08
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 1st, 2003
Variation: March 31st, 2008
2 days agoc1 colored aleurone1: C1 colored; C1-I dominant colorless; c1 colorless, includes c1-p (pigment inducible by light at germination), c1-n (not inducible)
9.01
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: June 16th, 2015
Variation: March 27th, 2013
2 days agopr1 red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
5.05
GRMZM2G025832
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: June 3rd, 2011
Variation: June 10th, 2011
Gene Model: September 22nd, 2011
2 days agosm2 salmon silk2: like sm1; silks salmon color with P1-rr and P1-wr, brown with P1-ww
2.07
GRMZM2G180283
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
2 days agosut1 sucrose transporter1: mutant plants are deficient in leaf sucrose unloading to pholem; mature leaves hyperaccumulate carbohydrates and display leaf chlorosis with premature senescence
1.02
GRMZM2G034302
Julius, BT et al. 2017. Plant Cell Physiol pp.doi: 10.1093/pcp/pcx090     Reference: September 20th, 2017
Gene Product: September 14th, 2013
Variation: April 16th, 2013
Gene Model: April 16th, 2013
2 days agosut2 sucrose transporter2: mutants grow slower and have increased sugar content in leaves
3.04
GRMZM2G307561
Julius, BT et al. 2017. Plant Cell Physiol pp.doi: 10.1093/pcp/pcx090     Reference: September 20th, 2017
Gene Product: September 14th, 2013
Variation: February 20th, 2017
Gene Model: April 17th, 2013
2 days agofls1 flavonol synthase1: partially complements the flavonol deficiency of the Arabidopsis fls1 mutant
 
GRMZM2G152801
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: October 10th, 2012
Variation: October 9th, 2012
Gene Model: October 9th, 2012
2 days agofls2 flavonol synthase2: Tightly linked tandem duplication of fls1
 
GRMZM2G069298
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: October 10th, 2012
Gene Model: October 9th, 2012
2 days agotxln1 taxilin1:
 
GRMZM2G015730
Zhang, Nan et al. 2012. PLoS One 7:e43822     Reference: May 23rd, 2013
Gene Product: May 23rd, 2013
Gene Model: September 20th, 2017
2 days agofns1 flavone synthase1:
 
GRMZM2G167336
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 20th, 2017
Gene Model: May 6th, 2016
3 days agoAY110452  :
1.09
GRMZM2G068259
    Variation: July 29th, 2004
Gene Model: September 19th, 2017
4 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Li, YP et al. 2017. Theor Appl Genet pp.doi: 10.1007/s00122-017-2978-1   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: September 18th, 2017
Gene Product: July 17th, 2012
Variation: July 19th, 2017
Gene Model: July 17th, 2012
4 days agodgk1 diacylglycerol kinase1:
1.05
GRMZM2G076911
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
4 days agodgk2 diacylglycerol kinase2:
 
GRMZM2G094452
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
4 days agodgk3 diacylglycerol kinase3:
 
GRMZM2G106578
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
4 days agodgk4 diacylglycerol kinase4:
 
GRMZM2G019562
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
4 days agodgk5 diacylglycerol kinase5:
 
GRMZM5G827286
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
4 days agodgk6 diacylglycerol kinase6:
 
GRMZM2G128214
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
4 days agodgk7 diacylglycerol kinase7:
 
GRMZM2G062429
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
4 days agoics1 isochorismate synthase like1:
7.02
GRMZM2G022837
  AT1G18870 (TAIR)
LOC_Os09g19734 (MSU/TIGR)
Gene Product: January 24th, 2014
Gene Model: September 18th, 2017
6 days agoplt2 phospholipid transfer protein homolog2: amino acid sequence, deduced from coleoptile cDNA; SSR locus umc1010
3.09
   Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
6 days agoumc1318  :
10.01
GRMZM5G898755
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 16th, 2017
6 days agocta1 chitinase A1: cDNA sequence corresponds to peptide sequence of maize 28kDa chitinase A
2.04
   Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
6 days agoctb1 chitinase B1: cDNA sequence corresponds to protein sequence of maize chitinase B
10.04
GRMZM2G005633
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 21st, 2015
6 days agoumc1594  :
3.09
GRMZM2G107839
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 16th, 2017
6 days agophp20075a(gast)  : NCBI: GAST1 protein
10.01
GRMZM2G172596
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 25th, 2017
6 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G127949
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 6th, 2015
6 days agoctn4 chitinase4:
 
GRMZM2G373106
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Gene Model: September 16th, 2017
6 days agoumi11 Ustilago maydis induced11:
7.00
GRMZM2G450866
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: January 12th, 2015
Variation: January 11th, 2015
Gene Model: January 11th, 2015
8 days agoxer1 xerico1: Over-expression improves water use efficiency and drought tolerance in transgenic maize plants through reduction in ABA8OX proteins stability and ABA degradation.
2.07
GRMZM2G018070
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
8 days agoxer3 xerico3:
 
GRMZM2G005840
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: September 14th, 2017
Variation: September 14th, 2017
Gene Model: September 14th, 2017
8 days agoxer2 xerico2:
 
GRMZM2G393349
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
8 days agoxer4 xerico4:
 
GRMZM2G029623
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
9 days agophos3 phosphate transporter3:
 
GRMZM5G872499
Salazar, MN. 2017. Zm00001d018445 structure   LOC_Os02g56510 (MSU/TIGR) Reference: September 13th, 2017
Gene Product: February 27th, 2016
Variation: September 13th, 2017
Gene Model: September 13th, 2017
10 days agokch6 potassium channel6:
8.03
AC234152.1_FG007
Philippar, K et al. 1999. Proc Natl Acad Sci, USA 96:12186-12191     Reference: October 20th, 2008
Gene Product: February 20th, 2008
Variation: April 14th, 2017
Gene Model: September 12th, 2017
10 days agokch7 potassium channel7:
 
GRMZM2G178356
Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712     Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: September 12th, 2017
Gene Model: September 12th, 2017
10 days agokch8 potassium channel8:
 
GRMZM5G838773
Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712     Reference: September 12th, 2017
Gene Product: February 20th, 2008
Gene Model: September 12th, 2017
10 days agokch4 potassium channel4:
3.02
GRMZM2G093313
Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712     Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: February 20th, 2008
Gene Model: April 22nd, 2011
10 days agokch3 potassium channel3: single copy (Southern blot), function confirmed by expression in Xenopus oocytes (Philippar 2003; Su 2005)
2.06
GRMZM2G081666
Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712     Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: April 22nd, 2011
Gene Model: April 22nd, 2011
11 days agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Wen, ZY et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00724   AT1G12110 (TAIR) Reference: September 11th, 2017
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
11 days agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
GRMZM2G086496
Wen, ZY et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00724   AT1G12110 (TAIR) Reference: September 11th, 2017
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
14 days agouce3 ubiquitin conjugating enzyme3:
1.01
GRMZM2G070047
Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073     Reference: September 8th, 2017
Gene Product: September 1st, 2003
Variation: February 15th, 2015
Gene Model: February 16th, 2015
14 days agoscmv1 resistance to sugarcane mosaic virus1: resistance requires dominant factors Scm1 and Scm2; resistance in various inbreds is concordant for SCMV and MDMV, yet recombinants of Scm1 occur with the NOR, whereas none were found for Mdm1 by Simcox et al. (1995)
6.00 - 6.01
GRMZM2G014055
Liu, Q et al. 2017. Molecular Plant 10:483-497     Reference: September 8th, 2017
Gene Product: September 1st, 2003
Variation: June 29th, 2005
Gene Model: September 7th, 2017
14 days agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073     Reference: September 8th, 2017
Variation: June 9th, 2014
Gene Model: June 9th, 2014
14 days agobx12 benzoxazinone synthesis12:
 
GRMZM2G023325
Gaillard, MDP et al. 2017. New Phytol pp.doi: 10.1111/nph.14757     Reference: September 8th, 2017
Gene Product: July 8th, 2013
Variation: July 8th, 2013
Gene Model: July 8th, 2013
14 days agofnsi2 flavone synthase typeI2: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
GRMZM2G475380
Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073   AT5G24530 (TAIR) Reference: September 8th, 2017
Gene Product: August 15th, 2015
Gene Model: August 14th, 2015
15 days agoabp1 auxin binding protein1: putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311)
3.05 - 3.05
   Leng, PF, et al. 2017. Molecular Plant. 0:doi: 10.1016/j.molp.2017.07.013     Reference: September 7th, 2017
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
15 days agofl3 floury3: endosperm opaque, soft; dosage effect
8.03
GRMZM2G006585
Li, Q et al. 2017. Plant Cell pp.doi: 10.1105/tpc.17.00576     Reference: September 7th, 2017
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
15 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Swarts, KL, et al. 2017. Science. 357:512-515     Reference: September 7th, 2017
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
15 days agoscmv2 resistance to sugarcane mosaic virus2: dominant Scmv1 and Scmv2 confer resistance
3.04
GRMZM2G116204
Leng, PF, et al. 2017. Molecular Plant. 0:doi: 10.1016/j.molp.2017.07.013     Reference: September 7th, 2017
Variation: June 29th, 2005
Gene Model: September 7th, 2017
15 days agoomt2 Caffeoyl CoA O-methyltransferase2:
9.02
GRMZM2G099363
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
15 days agoago18b argonaute18b: mutant affects length of central tassel branch
1.08
GRMZM2G457370
Sun, W et al. 2017. J Integr Plant Biol pp.doi: 10.1111/jipb.12596     Reference: September 7th, 2017
Gene Product: August 12th, 2016
Variation: September 7th, 2017
Gene Model: August 12th, 2016
15 days agofbxl1 F-box domain and LRR containing protein1: encodes an F-box domain and a leucine-rich-repeat domain protein
 
GRMZM2G481291
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: July 25th, 2017
Variation: July 25th, 2017
Gene Model: July 25th, 2017
15 days agorlk1 receptor-like protein kinase1: encodes an S-locus receptor-like protein kinase;
 
GRMZM2G099324
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: July 1st, 2015
Variation: July 25th, 2017
Gene Model: July 25th, 2017
15 days agopipf1 Ping-Pong family plant transposase1: encodes a PIF/Ping-Pong family plant transposase
 
GRMZM2G440198
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: July 25th, 2017
Variation: July 25th, 2017
Gene Model: July 25th, 2017
16 days agomgt10 magnesium transporter10: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G018706
Li, HY et al. 2017. Plant Mol Biol pp.doi: 10.1007/s11103-017-0645-1     Reference: September 6th, 2017
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
16 days agobzip127 bZIP-transcription factor 127: similar to Arabidopsis basic leucine zipper transcription factor-like protein (NCBI)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G175280
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 6th, 2017
Gene Model: September 6th, 2017
17 days agolfy1 leafy1: dominant Lfy1 plants have increased number of leaves above ear
 
   Cui, M et al. 2017. Frontiers Plant Sci 8:1437     Reference: September 5th, 2017
Variation: September 24th, 2015
17 days agowox11 WUSCHEL-related homeobox transcription factor 11:
 
   Zhao Y et al. 2009. Plant Cell. 21:736-48     Reference: September 5th, 2017
Gene Product: August 25th, 2017
20 days agowrky105 WRKY-transcription factor 105: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Cai, RH et al. 2017. Planta pp.doi: 10.1007/s00425-017-2766-9     Reference: September 2nd, 2017
Variation: September 2nd, 2017
21 days agoras11G1 ras-related protein11G1:
 
AC197246.3_FG001
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 24th, 2011
Gene Model: September 1st, 2017
25 days agohxa102 histone acetyltransferase complex component102:
 
GRMZM5G815323
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: August 28th, 2017
Variation: August 28th, 2017
Gene Model: August 28th, 2017
28 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: June 29th, 2005
28 days agowox9c WUSCHEL related homeobox 9c: late embryo in outer layer of suspensor through leaf 4 stage
 
GRMZM2G409881
Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: September 6th, 2007
Gene Model: December 21st, 2015
28 days agowox9b WUSCHEL related homeobox 9b: expressed in late embryo stages;in suspensor and also, unlike wox9c, in the shoot apical meristem (SAM)
 
GRMZM2G031882
Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: September 6th, 2007
Gene Model: December 21st, 2015
28 days agobnlg2057  :
1.06
GRMZM2G017629
    Variation: September 1st, 2003
Gene Model: August 25th, 2017
28 days agobnl5.59a  : Tests with B-A translocation stocks indicated that the probe does not map to 1L, 1S, 4L, 7L, or 9L and 6L gave false positives.
1.06
GRMZM2G113840
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2017
28 days agoarr6 ARR-B-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pan, QC et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00709     Reference: August 25th, 2017
Gene Product: June 30th, 2017
28 days agowox13b WUSCHEL-related homeobox transcription factor 13b:
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
28 days agowox13a WUSCHEL-related homeobox-transcription factor 13a:
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
28 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lowe, KS et al. 2016. Plant Cell pp.10.1105/tpc.16.00124     Reference: October 1st, 2016
Gene Product: August 25th, 2017
28 days agowox3b WUSCHEL-related homeobox 3b: embryonic transcription factor of wox3 gene family, which also includes ns1, ns2, and wox3a. Expression of of all is similar, except wox3a, wox3b are expressed in the shoot apical meristem, unlike ns1 or ns2 (Nardmann et al 2007).
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
28 days agowox5a WUSCHEL-homeobox-transcription factor 5A: embryonic WUSCHEL homeobox transcription factor (Nardmann et al 2007)
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
28 days agowox5b WUSCHEL-homeobox-transcription factor 5b: embryonic transcription factor (Nardmann et al 2007)
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
28 days agohb67 Homeobox-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Somssich, M et al. 2016. Development pp.doi: 10.1242/dev.133645     Reference: September 15th, 2016
Gene Product: August 25th, 2017
28 days agowox3a WUSCHEL homeobox 3A: embryonic transcription factor; expression in embryonic leaf similar to wox3b, but distinct from ns1/ns2 also in the wox3 gene family (Nardmann et al 2007)
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: August 24th, 2017
28 days agowox2b WUSCHEL-related homeobox 2b:
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: August 25th, 2017
28 days agowox2a WUSCHEL-related homeobox 2a`: embryonic transcription factor (Nardmann et al 2007)
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
28 days agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: February 20th, 2015
28 days agowox9a WUSCHEL related homeobox 9a: embryonic transcription factor (Nardmann et al 2007)
 
GRMZM2G133972
Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: January 31st, 2011
Gene Model: December 21st, 2015
28 days agowox4 wuschel-related homeobox4: embryonic WUSCHEL homeobox transcription factor specific to hypocotyl vascular system Nardmann et al 207
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: May 1st, 2016
28 days agowox12a wuschel-related homeobox12A: cDNA ortholog of Arabidopsis wuschel-related homeobox gene
 
   Nardmann, J; Werr, W. 2006. Molecular biology and evolution. 23:2492-2504     Reference: November 6th, 2006
Gene Product: August 25th, 2017
28 days agoIDP1951  :
1.06
GRMZM2G113726
    Variation: March 31st, 2005
Gene Model: August 25th, 2017
29 days agomyb63 MYB-transcription factor 63: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.08
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 25th, 2017
Variation: August 24th, 2017
29 days agomyb164 MYB-transcription factor 164: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 25th, 2017
Variation: August 24th, 2017
29 days agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Zhao, H et al. 2017. Chromosome Res pp.doi: 10.1007/s10577-017-9564-x     Reference: August 24th, 2017
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
30 days agouce8 ubiquitin conjugating enzyme8:
5.03
GRMZM2G146374
    Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
30 days agouce1 ubiquitin conjugating enzyme1: endosperm cDNA 2C06C11 (uaz102), similar to plant ubiquitin conjugating enzymes
1.08
GRMZM2G053764
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: July 7th, 2017
30 days agouce6 ubiquitin conjugating enzyme6:
 
GRMZM2G018447
    Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: July 7th, 2017
30 days agouce7 ubiquitin conjugating enzyme7:
 
GRMZM2G053764
    Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017

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