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Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes

One month | Six months | One year | All time

New or updated genes since one month ago. The cutoff date is May 19th, 2019.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin		Gene
Model		Recent ReferenceOrthologsUpdate information
2 days agomybr96 MYB-related-transcription factor 96: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
    Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: September 25th, 2007
2 days agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
 GRMZM2G005624
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
2 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
    Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
2 days agoremo4 remorin4:
7.04
 GRMZM2G081949
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: September 1st, 2003
Gene Model: September 11th, 2018
2 days agoiaa4 Aux/IAA-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.10
 GRMZM2G159285
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: November 15th, 2016
Gene Model: November 15th, 2016
2 days agocol16 C2C2-CO-like-transcription factor 16:
1.06
 GRMZM2G159996
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 18th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
2 days agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
    Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: October 24th, 2007
Variation: February 1st, 2015
2 days agophyA1 phytochromeA1: red/far red light signal receptor; major phytochrome A transcript in seedling leaf blade, sheath and mesocotyl under dark light conditions; is greatly reduced in white or red light. See also phyA2, phyB1, phyB2, phyC1, phyC2.
1.10
 GRMZM2G157727
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 30th, 2009
Variation: September 25th, 2007
Gene Model: August 13th, 2014
2 days agophyA2 phytochromeA2: red/far red light signal receptor; minor phytochrome A trancript in dark grown seedling leaf blade, sheath, mesocotyl. See also phyA1, phyB1, phyB2, phyC1, phyC2
5.01
 GRMZM2G181028
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 30th, 2009
Variation: September 1st, 2003
Gene Model: August 13th, 2014
2 days agofht2 flavanone 3-hydroxylase2:
1.04
 GRMZM2G382569
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 8th, 2012
Gene Model: June 7th, 2017
2 days agodbb1 double B-box zinc finger protein1:
2.04
 GRMZM2G018876
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
2 days agomeg5 maternally expressed gene5: Maternally transmitted alleles preferentially expressed in endosperm
7.01
 GRMZM2G354335
 Gutierrez-Marcos, J, et al. 2004. Plant Cell. 16:1288-1301     Reference: October 15th, 2009
Variation: August 29th, 2014
Gene Model: June 17th, 2019
2 days agovt2 vanishing tassel2: inflorescence development; TRP-dependent auxin synthesis
 
 GRMZM2G127308
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142   AT1G70560 (TAIR) Reference: June 17th, 2019
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
2 days agoga20ox3 gibberellin 20-oxidase3:
 
 GRMZM2G368411
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: October 28th, 2014
Gene Model: October 29th, 2014
2 days agoga2ox12 gibberellin 2-oxidase12:
 
 GRMZM2G177104
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: October 27th, 2014
Gene Model: October 30th, 2014
2 days agodbb7 double B-box zinc finger protein7:
 
 GRMZM2G110541
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
2 days agoxer3 xerico3:
 
 GRMZM2G005840
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: September 14th, 2017
Variation: September 14th, 2017
Gene Model: September 14th, 2017
2 days agofkf1 flavin-binding kelch repeat f-box1: Involved in regulating the circadian clock and photoperiodic flowering
 
 GRMZM2G107945
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
2 days agotoc2 timing of cab expression2: Ortholog of Arabidopsis toc1
 
 GRMZM2G148453
 Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142   AT5G61380 (TAIR) Reference: June 17th, 2019
Gene Product: January 11th, 2018
Gene Model: January 11th, 2018
2 days agophyC1 phytochromeC1: red/far red light signal receptor; major phytochrome C trancript in light and dark grown seedling leaf blade, sheath, mesocotyl. See also phyC2, phyA1, phyA2 phyB1, phyB2.
1.10
    Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 30th, 2009
Variation: June 30th, 2009
5 days agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
    Liu, HJ et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13186     Reference: June 14th, 2019
Gene Product: December 18th, 2014
Variation: December 17th, 2014
5 days agomterf10 mTERF domain protein10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Pan, ZY et al. 2019. G3 pp.doi: 10.1534/g3.119.400265     Reference: June 14th, 2019
Gene Product: February 19th, 2015
Variation: June 14th, 2019
5 days agosmk6 small kernel6: encodes a mitochondrion-localized PPR protein that mediates the C-to-U editing at multiple sites
 
 GRMZM2G010046
 Ding, S et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.152992     Reference: June 14th, 2019
Gene Product: December 27th, 2016
Variation: June 14th, 2019
Gene Model: June 14th, 2019
5 days agonactf23 NAC-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to protein ATAF2 of A. thaliana
8.08
 GRMZM2G068973
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: June 14th, 2019
6 days agodek40 defective kernel40: encodes a cytosol-localized proteasome biogenesis-associated chaperone (PBAC4)
 
 GRMZM2G019538
 Wang, GF et al. 2019. Plant Physiol pp.doi: 10.1104/pp.18.01419     Reference: June 13th, 2019
Gene Product: June 13th, 2019
Variation: June 13th, 2019
Gene Model: June 13th, 2019
7 days agomads67 MADS-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
 GRMZM2G147716
 Anderson, JA et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00391     Reference: June 12th, 2019
Gene Product: September 1st, 2003
Gene Model: February 7th, 2019
8 days agodek44 defective kernel44: encodes mitochondrial ribosomal protein L9
 
 GRMZM5G866627
 Qi, WW et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00546     Reference: June 11th, 2019
Gene Product: June 11th, 2019
Variation: June 11th, 2019
Gene Model: June 11th, 2019
9 days agovg1 vestigial glume1: dominant Vg1 glumes very small, cob and anthers exposed; upper leaves have scant ligules
1.07
 GRMZM2G079805
 Liu, CX et al. 2019. Crop J. doi: 10.1016/j.cj.2019.04.001     Reference: June 10th, 2019
Gene Product: June 10th, 2019
Variation: September 1st, 2003
Gene Model: June 10th, 2019
9 days agodmp1 DUF679 domain membrane protein1: mutants enhance haploid induction
 
 GRMZM2G465053
 Zhong, Y et al. 2019. Nature Plants 5:575-580     Reference: June 10th, 2019
Gene Product: June 10th, 2019
Variation: June 10th, 2019
Gene Model: June 10th, 2019
10 days agoras8A1 ras-related protein8A1:
 
 GRMZM5G886109
     Variation: January 20th, 2011
Gene Model: June 9th, 2019
11 days agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
 GRMZM2G081554
 Heuermann, MC et al. 2019. Plant J pp.doi: 10.1111/tpj.14431     Reference: June 8th, 2019
Gene Product: August 16th, 2012
Variation: June 8th, 2019
Gene Model: November 7th, 2011
11 days agow2 white seedling2: white seedling (yellow with l1); endosperm pitted and spotted (allele dek21); plastid DNA content decreasedChloroplast DNA polymerase. Required for chloroplast DNA replication. (A. Barkan, 2015)
10.07 - 10.07
 GRMZM2G480171
 Heuermann, MC et al. 2019. Plant J pp.doi: 10.1111/tpj.14431     Reference: June 8th, 2019
Gene Product: September 19th, 2012
Variation: June 8th, 2019
Gene Model: September 19th, 2012
11 days agodek33 defective kernel33: opaque, floury, dented, wrinkled kernel with floury endosperm; occasionally viviparous
5.04 - 5.05
 GRMZM2G090068
 Dai, DW et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz268.     Reference: June 8th, 2019
Gene Product: November 13th, 2018
Variation: November 13th, 2018
Gene Model: November 13th, 2018
11 days agopcr2 protochlorophyllide reductase2:
 
 GRMZM2G036455
 Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Gene Model: October 4th, 2017
11 days agopcr3 protochlorophyllide reductase3: localized in chloroplast; overexpression increased tocopherol content in leaves and kernels (Zhan et al., 2019)
 
 GRMZM2G073351
 Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Variation: June 8th, 2019
Gene Model: October 4th, 2017
11 days agopcr1 protochlorophyllide reductase1: leaf cDNA csu349 similar to plant protochlorophyllide reductase
2.01
 GRMZM2G084958
 Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Variation: February 25th, 2013
Gene Model: October 8th, 2014
13 days agopin12 PIN-formed protein12: similar to Arabidopsis PIN10 (Forestan et al 2012)
9.02
 GRMZM2G160496
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
13 days agozep1 zeaxanthin epoxidase1:
2.04
 GRMZM2G127139
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
13 days agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
    Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
13 days agoaic1 auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.
1.05
 GRMZM2G129413
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716   AT2G21050 (TAIR) Reference: June 6th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
13 days agotar1 tryptophan aminotransferase related1:
6.05
 GRMZM2G127160
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 30th, 2011
Gene Model: June 4th, 2012
13 days agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
 GRMZM2G091819
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
13 days agoabh1 abscisic acid 8'-hydroxylase1:
 
 GRMZM2G179147
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: February 15th, 2013
Variation: September 1st, 2011
Gene Model: February 15th, 2013
13 days agoyuc2 Yucca2:
 
 GRMZM2G159393
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
13 days agoyuc3 Yucca3:
 
 GRMZM2G107761
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
13 days agopin10 PIN-formed protein10: similar to Arabidopsis PIN10 (Forestan et al 2012)
 
 GRMZM2G126260
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
13 days agoyuc4 Yucca4: up-regulated by light irradiation in the 0-1mm tip region
 
 GRMZM2G141383
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
13 days agoyuc6 Yucca6: transcribed in the root apex (0-5mm)
 
 GRMZM2G019515
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
13 days agoyuc7 yucca7:
 
 GRMZM2G480386
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
13 days agoyuc8 yucca8:
 
 GRMZM2G017193
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
13 days agoprh20 protein phosphatase homolog20:
 
 GRMZM2G300125
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
13 days agopin2 PIN-formed protein2: see pin1
5.06
 GRMZM2G074267
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
13 days agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
 GRMZM2G398650
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
13 days agoabh4 abscisic acid 8'-hydroxylase4:
7.02
 GRMZM2G065928
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: February 15th, 2013
Variation: March 31st, 2005
Gene Model: July 7th, 2017
13 days agoao1 aldehyde oxidase1: functionally cloned (Sekimoto et al 1997)
1.11
 GRMZM2G141535
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: May 2nd, 2012
Variation: May 30th, 2012
Gene Model: October 4th, 2014
13 days agovp14 viviparous14: viviparous; yellow endosperm; abscisic acid biosynthesis; SSR umc1218
1.08
 GRMZM2G014392
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: September 20th, 2012
Variation: June 25th, 2007
Gene Model: May 13th, 2011
13 days agoyuc5 Yucca5: transcribed in the root apex (0-5mm)
7.02
 GRMZM2G132489
 Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
14 days agotcptf38 TCP-transcription factor 38: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Ding, SC et al. 2019. Int J Mol Sci 20:2762     Reference: June 5th, 2019
Gene Product: November 2nd, 2014
14 days agozip5 zinc-regulated, iron-regulated transporter-like protein5:
6.04
 GRMZM2G064382
 Li, SZ et al. 2019. Plant Cell Physiol pp.doi; 10.1093/pcp/pcz104     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Variation: September 1st, 2003
Gene Model: August 25th, 2018
14 days agozip1 zinc-regulated, iron-regulated transporter-like protein1:
 
 GRMZM2G001803
 Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
14 days agozip2 zinc-regulated, iron-regulated transporter-like protein2:
 
    Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
14 days agozip3 zinc-regulated, iron-regulated transporter-like protein3:
 
 GRMZM2G045849
 Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
14 days agozip4 zinc-regulated, iron-regulated transporter-like protein4:
 
 GRMZM2G111300
 Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
14 days agozip6 zinc-regulated, iron-regulated transporter-like protein6:
 
 GRMZM2G034551
 Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
14 days agozip7 zinc-regulated, iron-regulated transporter-like protein7:
 
 GRMZM2G015955
 Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
14 days agozip8 zinc-regulated, iron-regulated transporter-like protein8:
 
 GRMZM2G093276
 Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
14 days agoirt1 iron-regulated transporter1:
 
 GRMZM2G118821
 Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
15 days agoakin2 AKINbetagamma-1 protein kinase2:
1.03
    Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: December 31st, 2018
Variation: September 25th, 2007
15 days agosweet1a sugars will eventually be exported transporter1a:
3.06
 GRMZM2G039365
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
15 days agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
    Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 1st, 2003
Variation: September 4th, 2013
15 days agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
 GRMZM2G153541
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
15 days agosut1 sucrose transporter1: mutant plants are deficient in leaf sucrose unloading to pholem; mature leaves hyperaccumulate carbohydrates and display leaf chlorosis with premature senescence
1.02
 GRMZM2G034302
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 14th, 2013
Variation: April 16th, 2013
Gene Model: April 16th, 2013
15 days agosut2 sucrose transporter2: mutants grow slower and have increased sugar content in leaves
3.04
 GRMZM2G307561
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 14th, 2013
Variation: February 20th, 2017
Gene Model: April 17th, 2013
15 days agotrps1 trehalose-6-phosphate synthase1:
 
 GRMZM2G068943
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: May 28th, 2012
15 days agotrpp8 trehalose-6-phosphate phosphatase8:
 
 GRMZM2G174396
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
15 days agotrps7 trehalose-6-phosphate synthase7:
 
 GRMZM2G123277
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
15 days agotrps13 trehalose-6-phosphate synthase13:
 
 GRMZM2G019183
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
15 days agosweet1b sugars will eventually be exported transporter1b: encodes a functional glucose transporter expressed in subsidiary cells; mutants result in reduced stomatal opening
 
 GRMZM2G153358
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: November 4th, 2015
Variation: April 19th, 2019
Gene Model: November 3rd, 2015
15 days agosweet2 sugars will eventually be exported transporter2: similar to nodulin MtN3-like protein of A. thaliana
 
 GRMZM2G324903
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
15 days agotrpp6 trehalose-6-phosphate phosphatase6: similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein
5.06
 GRMZM2G112830
 Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: February 7th, 2018
16 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
    Johnston, RM; Sylvester, AW; Scanlon, MJ. 2017. Journal of Visual Experiments. 0:doi: 10.3791/55004     Reference: June 3rd, 2019
Gene Product: December 18th, 2014
Variation: November 8th, 2007
16 days agosmd1 suppressor of meiotic drive1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
10.06
    Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 7th, 2018
16 days agosmd12 suppressor of meiotic drive12: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
    Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 7th, 2018
16 days agoki1 Kindr-RNAi1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
    Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 8th, 2018
17 days agomop1 mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I
2.04
 GRMZM2G042443
 Jia, Y, et al. 2009. PLoS Genetics. 0:doi:10.1371/journal.pgen.1000737     Reference: June 2nd, 2019
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Gene Model: April 24th, 2013
Recommended by Ed Coe:
January 8th, 2008
17 days agofea3 fasciated ear3: ear tip broad and branched, typically splitting and showing ring fasciation to form a hollow ear.
 
 GRMZM2G166524
 Strable, J; Scanlon, MJ. 2016. Nature Genetics. 48:704-5   At3g25670 (TAIR)
LOC_Os01g02060 (MSU/TIGR) 		Reference: June 2nd, 2019
Gene Product: May 21st, 2016
Variation: May 18th, 2016
Gene Model: May 18th, 2016
17 days agofcp1 fon2-like cle protein1: mutants have a fasciated ear phenotype
 
 GRMZM2G165836
 Strable, J; Scanlon, MJ. 2016. Nature Genetics. 48:704-5   LOC_Os04g39770 (MSU/TIGR)
Os04g0473800 (Gramene) 		Reference: June 2nd, 2019
Gene Product: May 21st, 2016
Variation: April 15th, 2019
Gene Model: May 21st, 2016
18 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
    Shimizu, R; Ji, J; Schnable, PS; Scanlon, MJ. 2009. Annu Rev Plant Physiol Plant Mol Biol. 149:841-50     Reference: June 1st, 2019
Gene Product: August 25th, 2017
Variation: June 29th, 2005
18 days agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
    Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
18 days agotrpp4 trehalose-6-phosphate phosphatase4: double mutants with ra3 give a more extreme phenotype
4.08
 GRMZM2G151044
 Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Variation: April 2nd, 2019
Gene Model: June 7th, 2018
18 days agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
    Shimizu, R; Ji, J; Schnable, PS; Scanlon, MJ. 2009. Annu Rev Plant Physiol Plant Mol Biol. 149:841-50     Reference: June 1st, 2019
Gene Product: August 25th, 2017
Variation: February 20th, 2015
18 days agotrpp12 trehalose-6-phosphate phosphatase12:
 
 GRMZM2G178546
 Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
18 days agotrpp13 trehalose-6-phosphate phosphatase13:
 
 GRMZM5G890599
 Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Gene Model: April 2nd, 2019
18 days agotrpp14 trehalose-6-phosphate phosphatase14:
 
    Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
19 days agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
 GRMZM2G315375
 Zhang, XG et al. 2019. J Plant Biol 62:217-228     Reference: May 31st, 2019
Gene Product: May 1st, 2012
Variation: May 31st, 2019
Gene Model: April 28th, 2012
19 days agoras11G1 ras-related protein11G1:
 
 AC197246.3_FG001
 Zhang, XG et al. 2019. J Plant Biol 62:217-228     Reference: May 31st, 2019
Variation: January 24th, 2011
Gene Model: September 1st, 2017
21 days agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
 GRMZM2G044481
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
21 days agoarftf9 ARF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
    Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Variation: September 25th, 2007
21 days agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
 GRMZM2G148200
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
21 days agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
 GRMZM2G144744
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
21 days agoga2ox1 gibberellin 2-oxidase1: Bolduc and Hake (Plant Cell 21:1647-58, 2009) identify this ga2ox as ga2ox1 by phylogeny. See Supplemental Figure 6. Comparison of syntenic regions containing ga2ox1 in different grasses. They also show that it is a direct target of KN1.
 
 GRMZM2G078798
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Variation: November 20th, 2012
Gene Model: November 20th, 2012
21 days agoo5 opaque endosperm5: like o1; virescent to yellow or white seedlings
7.02
 GRMZM2G142873
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: June 17th, 2011
Variation: August 29th, 2011
Gene Model: September 19th, 2011
21 days agows1 white sheath1: light yellow leaf sheaths; duplicate factor with ws2.
 
    Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
21 days agows3 white sheath3: white leaf sheath, culm, husks; seedlings often virescent
2.01
    Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
21 days agows2 white sheath2: light yellow leaf sheaths; duplicate factor with ws1
 
    Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
21 days agoarftf11 ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Variation: July 7th, 2017
21 days agoexpa1 alpha expansin1: belongs to a multigene family and probably exists as a single copy.
3.06
    Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 12th, 2008
Variation: September 1st, 2003
21 days agocki1 cyclin-dependent kinase inhibitor1:
1.08
 GRMZM2G116885
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Variation: December 6th, 2016
Gene Model: December 6th, 2016
21 days agobif2 barren inflorescence2: recessive few-branched tassel, normally no pollen shed; variable expression on ear with 0-2 spikelets produced at each floral node
1.05
    Zhang, XR et al. 2019. Plant Sci 283:177-188   AT2G34650 (TAIR) Reference: May 29th, 2019
Gene Product: July 19th, 2012
Variation: October 23rd, 2013
21 days agoga20ox1 gibberellin 20-oxidase1:
1.12
 AC203966.5_FG005
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
21 days agoexpb4 beta expansin4:
7.02
 GRMZM2G154178
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Variation: May 31st, 2010
Gene Model: March 2nd, 2016
21 days agoko1 kaurene oxidase1:
 
 GRMZM2G059308
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
21 days agoga20ox2 gibberellin 20-oxidase2:
 
 GRMZM2G021051
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
21 days agoga2ox8 gibberellin 2-oxidase8:
 
 GRMZM2G155686
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
21 days agoatl1 auxin transporter-like1: mutant tassels have reduced branch numbers; bald tip on ears with fewer spikelets per row, and agravitropic root growth
 
 GRMZM2G127949
 Zhang, XR et al. 2019. Plant Sci 283:177-188   AT2G38120 (TAIR)
LOC_Os01g63770 (MSU/TIGR) 		Reference: May 29th, 2019
Gene Product: April 19th, 2017
Variation: April 19th, 2017
Gene Model: March 12th, 2015
21 days agopht10 phosphate transporter protein10:
 
 GRMZM2G075870
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
21 days agocki3 cyclin-dependent kinase inhibitor3:
 
 GRMZM2G157510
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Variation: May 4th, 2017
Gene Model: March 7th, 2017
21 days agoprh17 protein phosphatase homolog17: responds to Pi starvation
 
 GRMZM2G164352
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Variation: April 28th, 2017
Gene Model: April 28th, 2017
21 days agovpp7 vacuolar proton pump7: SNP; NCBI defines as a vacuolar proton pump-like protein
 
 GRMZM2G069095
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
21 days agosqd1 sulfolipid biosynthesis1:
 
 GRMZM2G053322
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: December 1st, 2018
Gene Model: December 1st, 2018
21 days agomco1 multicopper oxidase1:
 
 GRMZM2G086727
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: May 29th, 2019
Gene Model: May 29th, 2019
21 days agotir2 transport inhibitor response2:
 
 GRMZM2G155849
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: July 25th, 2017
Gene Model: May 29th, 2019
21 days agovpp9 vacuolar proton pump9:
 
 GRMZM2G069410
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: August 16th, 2016
Gene Model: May 29th, 2019
21 days agocki5 cyclin-dependent kinase inhibitor5:
5.07
 GRMZM2G101613
 Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
23 days agomez2 enhancer of zeste2:
9.04
 GRMZM5G875502
 Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: January 13th, 2019
Gene Model: January 13th, 2019
23 days agomez1 enhancer of zeste1:
6.01
    Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: June 30th, 2017
Variation: July 3rd, 2015
23 days agomez3 enhancer of zeste3:
1.03
 GRMZM2G043484
 Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: June 30th, 2017
Variation: September 1st, 2014
Gene Model: September 2nd, 2014
23 days agofie1 fertilization independent endosperm1:
4.05
    Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: December 4th, 2012
23 days agofie2 fertilization independent endosperm2:
10.03
    Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: May 27th, 2014
23 days agonfc103a nucleosome/chromatin assembly factor C:
1.08
 GRMZM2G090217
 Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
23 days agonfc103b nucleosome/chromatin assembly factor C:
5.03
 GRMZM2G320606
 Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
23 days agovef101a  :
7.02
 GRMZM2G157422
 Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: May 27th, 2019
23 days agorbap2 WD-repeat protein RBAP2: first reported as a partial cDNA clone, AF250048, showing high sequence homology with genes rbap1 and rbap3.
3.07
 GRMZM2G137965
 Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 10th, 2012
23 days agonfc104a nucleosome/chromatin assembly factor 104: First identified by the Maize Chromatin Project, who supplied map scores to the Maize Mapping Project towards placement on the CIMDE IBM maps.
7.06
 GRMZM2G032711
 Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
26 days agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
    Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Variation: June 22nd, 2005
26 days agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
    Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Gene Product: September 10th, 2018
Variation: May 24th, 2019
26 days agopme3 pectin methylesterase3: present and expressed only in Ga1-s genotypes; mutationally inactivated version present in Ga1-m
 
    Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Gene Product: September 10th, 2018
26 days agodek41 defective kernel41: mutations cause reduced splicing efficiency of mitochondrial nad4 intron 3, resulting in severely reduced complex I assembly and NADH dehydrogenase activity
 
 GRMZM2G127015
 Ren, RC et al. 2019. J Integr Plant Biol pp.doi: 10.1111/jipb.12843     Reference: May 24th, 2019
Gene Product: December 27th, 2016
Variation: May 24th, 2019
Gene Model: April 25th, 2019
27 days agoccp2 cysteine protease2: mRNA differentially enhanced in late- vs. early-senescing lines; similarity to rice oryzain gamma (cysteine protease) and castor bean vacuolar processing enzyme
7.02
    Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: July 30th, 2011
27 days agomir1 maize insect resistance1: single copy cDNA
6.02
    Castano-Duque, L et al. 2017. J Chem Ecol pp.doi: 10.1007/s10886-017-0904-2     Reference: November 21st, 2017
Gene Product: May 23rd, 2019
Variation: November 21st, 2017
27 days agoccp3 cysteine protease3: apoplastic; cysteine protease
10.07
 GRMZM2G073465
 Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: September 1st, 2003
Gene Model: January 16th, 2018
27 days agomir3 maize insect resistance3: apoplastic; pest defense protease
 
 GRMZM2G166281
 Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: August 1st, 2011
Gene Model: February 12th, 2014
27 days agotraf8 TNF receptor-associated factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.,
 
 GRMZM2G026556
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
27 days agotraf7 TNF receptor-associated factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.,
 
 GRMZM2G022606
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
27 days agodogt1 deoxynivalenol-glucosyltransferase1:
 
 GRMZM2G403740
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
27 days agocxe18 carboxyesterase18:
 
 GRMZM2G104141
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
27 days agoccp6 cysteine protease6: novel root specific apoplastic papain-like cysteine protease (PLCP) that shows a distinct substrate specificity and inhibitory profile
 
 GRMZM2G340065
 Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Gene Model: May 23rd, 2019
27 days agoccp4 cysteine protease4: apoplastic; pest defense response
7.03
 GRMZM2G108849
 Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Gene Model: February 13th, 2014
27 days agoccp5 cysteine protease5: apoplastic; response to U. maydis infection
6.01
 GRMZM2G066326
 Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: March 31st, 2005
Gene Model: February 13th, 2014
27 days agoccp1 cysteine protease1: seed cDNA sequence
5.04
    Zaidi, PH et al. 2015. PLoS One 10:e0124350     Reference: April 18th, 2015
Gene Product: May 23rd, 2019
Variation: May 20th, 2015
27 days agothp*-MCP10A thiol protease MCP10A: cDNA sequence similar to barley cysteine protease; copy number less than 5
 
    Pechan, T et al. 1999. Plant Mol Biol 40:111-119     Reference: September 1st, 2003
Gene Product: May 23rd, 2019
29 days agoamt8 ammonium transporter8: similar to Arabidopsis ammonium transporter 2
1.11
 GRMZM5G883969
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: October 19th, 2017
29 days agonactf130 NAC-transcription factor 130: Involved in coordinating the accumulation of starch and proteins by regulating the expression of key starch biosynthetic enzymes and the major seed proteins (Zhang et al., 2019)
 
    Zhang, ZY et al. 2019. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1904995116     Reference: May 21st, 2019
Gene Product: September 22nd, 2015
29 days agoumc1991  : Similar to Arabidopsis MATE efflux family protein (multidrug and toxic compound extrusion (MATE) family)NCBI: transparent testa 12 protein
1.08
 GRMZM5G842695
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: December 27th, 2016
Gene Model: December 27th, 2016
29 days agoumc1995  :
10.04
 GRMZM2G343291
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: September 1st, 2003
Gene Model: December 15th, 2017
29 days agonrt2 nitrate transport2:
4.11
 GRMZM2G010280
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: May 9th, 2018
Gene Model: May 9th, 2018
29 days agocsu221  :
4.00
 GRMZM2G131409
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: September 1st, 2003
Gene Model: April 17th, 2018
29 days agoAI676903  :
5.00
 GRMZM5G862317
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: July 29th, 2004
Gene Model: June 13th, 2018
29 days agoamt5 ammonium transporter5:
10.04
 GRMZM2G164743
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: December 29th, 2017
29 days agonrp1 no-apical-meristem-related protein1: Involved in coordinating the accumulation of starch and proteins by regulating the expression of key starch biosynthetic enzymes and the major seed proteins (Zhang et al., 2019)
 
 GRMZM2G062650
 Zhang, ZY et al. 2019. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1904995116     Reference: May 21st, 2019
Gene Product: September 22nd, 2015
Variation: March 31st, 2011
Gene Model: July 28th, 2016
29 days agoamt1 ammonium transporter1:
 
 GRMZM2G175140
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
29 days agoamt2 ammonium transporter2:
 
 GRMZM2G028736
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
29 days agoamt3 ammonium transporter3:
 
 GRMZM2G118950
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
29 days agonrt1 nitrate transport1:
 
 GRMZM2G010251
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
29 days agonrt4 nitrate transport4:
 
 GRMZM2G163494
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
29 days agonrt3 nitrate transport3:
 
 GRMZM2G163866
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
29 days agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
 GRMZM2G161459
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0   AT1G12110 (TAIR) Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
29 days agonpf3 nitrate transporter/peptide transporter family3:
 
 GRMZM2G112154
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
29 days agonpf4 nitrate transporter/peptide transporter family4:
 
 GRMZM2G161483
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
29 days agonpf5 nitrate transporter/peptide transporter family5:
 
 GRMZM2G161483
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
29 days agoamt4 ammonium transporter4:
 
 GRMZM2G062024
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 10th, 2018
29 days agogpat6 glycerol-3-phosphate acyltransferase6:
 
 GRMZM2G033767
 Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
29 days agonpf6 nitrate transporter/peptide transporter family6:
 
 GRMZM2G137421
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
29 days agonpf7 nitrate transporter/peptide transporter family7:
 
 GRMZM2G064091
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
29 days agonpf8 nitrate transporter/peptide transporter family8:
 
 GRMZM2G476069
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
29 days agonpf9 nitrate transporter/peptide transporter family9:
 
 GRMZM2G176253
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
29 days agonpf10 nitrate transporter/peptide transporter family10:
 
 GRMZM2G044851
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
29 days agonpf11 nitrate transporter/peptide transporter family11:
 
 GRMZM2G061303
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
29 days agonrt5 nitrate transport5:
 
 GRMZM2G455124
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
29 days agoamt6 ammonium transporter6:
 
 GRMZM2G080045
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
29 days agoamt7 ammonium transporter7:
 
 GRMZM2G335218
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
29 days agoamt9 ammonium transporter9:
 
 GRMZM2G043193
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
29 days agoamt10 ammonium transporter10:
 
 GRMZM2G473697
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
29 days agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
 GRMZM2G086496
 Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0   AT1G12110 (TAIR) Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
30 days agocpd33 carbohydrate partitioning defective33: mutants accumulate excess starch and soluble sugars in mature leaves
 
 GRMZM5G852378
 Tran, TM et al. 2019. Molecular Plant pp.doi: 10.1016/j.molp.2019.05.001     Reference: May 17th, 2019
Gene Product: May 20th, 2019
Variation: May 17th, 2019
Gene Model: May 17th, 2019

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