v4 Gene Model ID v3 Gene Model ID Gene Symbol Full Name v4 Source v3 Source Chromosome Start End 0 0 Zm00001d044122 GRMZM2G026930 a1 anthocyaninless1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 219,867,858 219,869,656 Zm00001d014914 GRMZM2G345717 a2 anthocyaninless2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 68,025,894 68,027,081 Zm00001d011438 GRMZM2G013726 a4 anthocyaninless4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 150,482,983 150,484,456 Zm00001d002326 GRMZM5G817886 aaa1 adenosylmethionine aminotransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,330,318 10,335,434 Zm00001d044916 GRMZM2G120302 aap1 acylaminoacyl-peptidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 7,175,186 7,182,490 Zm00001d023529 GRMZM2G136910 aasr1 abscisic acid stress ripening1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al 2011 Chr10 8,781,222 8,782,218 Zm00001d004843 GRMZM5G854138 aasr2 abscisic acid stress ripening2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al 2011 Chr2 143,855,973 143,857,138 Zm00001d003712 GRMZM2G044132 aasr3 abscisic acid stress ripening3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al 2011 Chr2 55,894,819 55,896,267 Zm00001d025401 GRMZM2G052100 aasr5 abscisic acid stress ripening5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al 2011 Chr10 117,126,777 117,127,673 Zm00001d016760 GRMZM2G057841 aasr6 abscisic acid stress ripening6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al 2011 Chr5 175,170,002 175,170,821 Zm00001d040786 GRMZM2G014797 aasr7 abscisic acid stress ripening7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al 2011 Chr3 65,871,460 65,871,780 Zm00001d040785 GRMZM2G314075 aasr8 abscisic acid stress ripening8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al 2011 Chr3 65,868,063 65,868,371 Zm00001d040787 GRMZM2G383699 aasr9 abscisic acid stress ripening9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al 2011 Chr3 65,889,207 65,889,515 Zm00001d034925 GRMZM2G387394 aat1 anthocyanin acyltransferase1 Chr1 305,698,918 305,700,369 Zm00001d051915 GRMZM2G157369 abc1 ABC(yeast) homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 174,610,009 174,614,912 Zm00001d027999 GRMZM2G097283 abc4 aberrant chloroplast development4 Chr1 19,906,136 19,909,038 Zm00001d007597 GRMZM2G105570 abcf1 ABC family1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 235,972,116 235,976,132 Zm00001d002871 GRMZM2G177812 abcg11 ABC transporter G family member 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr2 25,171,106 25,176,433 Zm00001d017762 GRMZM2G179147 abh1 abscisic acid 8'-hydroxylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence DR806072 Chr5 206,138,068 206,140,902 Zm00001d051554 GRMZM2G126505 abh2 abscisic acid 8'-hydroxylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence CD433445 Chr4 162,654,597 162,657,413 Zm00001d050021 GRMZM2G105954 abh3 abscisic acid 8'-hydroxylase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence EU964577 Chr4 60,281,640 60,287,213 Zm00001d020717 GRMZM2G065928 abh4 abscisic acid 8'-hydroxylase4 aligns to sequence EC904849 Chr7 129,916,943 129,919,846 Zm00001d005889 GRMZM2G002142 abh5 abscisic acid 8'-hydroxylase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence CD941324 Chr2 191,792,061 191,795,245 Zm00001d026694 AC193767.3_FG003 abi10 ABI3-VP1-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 150,074,342 150,075,529 Zm00001d030908 GRMZM2G065478 abi11 ABI3-VP1-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 166,746,593 166,757,849 Zm00001d002562 GRMZM2G102059 abi12 ABI3-VP1-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,448,580 15,449,809 Zm00001d011639 GRMZM2G065538 abi13 ABI3-VP1-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 157,135,997 157,137,214 Zm00001d049369 GRMZM2G106673 abi14 ABI3-VP1-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 28,013,684 28,016,851 Zm00001d044676 GRMZM2G361376 abi15 ABI3-VP1-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 234,644,734 234,648,687 Zm00001d017618 GRMZM2G024948 abi16 ABI3-VP1-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,875,376 201,876,644 Zm00001d003601 GRMZM2G017187 abi17 ABI3-VP1-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 49,476,573 49,482,029 Zm00001d013723 GRMZM2G019956 abi18 ABI3-VP1-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,591,711 18,594,476 Zm00001d011712 GRMZM2G035701 abi19 ABI3-VP1-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 159,488,658 159,493,031 Zm00001d026005 GRMZM2G018485 abi2 ABI3-VP1-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,849,250 135,850,464 Zm00001d011745 GRMZM2G313737 abi20 ABI3-VP1-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 160,627,041 160,632,198 Zm00001d025233 GRMZM2G126194 abi21 ABI3-VP1-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 110,237,211 110,238,274 Zm00001d021790 GRMZM2G008356 abi22 ABI3-VP1-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 163,070,121 163,078,254 Zm00001d024545 GRMZM2G180168 abi23 ABI3-VP1-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 77,547,497 77,548,246 Zm00001d033314 GRMZM2G088413 abi24 ABI3-VP1-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 258,696,000 258,705,544 Zm00001d033324 GRMZM2G344521 abi25 ABI3-VP1-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 259,037,229 259,041,582 Zm00001d024354 GRMZM2G423393 abi26 ABI3-VP1-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 66,471,477 66,472,334 Zm00001d031225 GRMZM2G123461 abi27 ABI3-VP1-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,664,294 182,665,524 Zm00001d004358 GRMZM2G109879 abi28 ABI3-VP1-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 106,081,084 106,087,544 Zm00001d036079 GRMZM2G084173 abi29 ABI3-VP1-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 70,988,040 70,992,940 Zm00001d001838 GRMZM2G149940 abi3 ABI3-VP1-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 1,675,459 1,681,671 Zm00001d033314 GRMZM2G088427 abi30 ABI3-VP1-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 258,696,000 258,705,544 Zm00001d042460 GRMZM2G177244 abi31 ABI3-VP1-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 168,475,311 168,480,286 Zm00001d022440 GRMZM2G158162 abi32 ABI3-VP1-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 177,716,517 177,723,636 Zm00001d029749 GRMZM2G125095 abi34 ABI3-VP1-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 85,320,646 85,321,467 Zm00001d017112 GRMZM5G834874 abi35 ABI3-VP1-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 185,773,130 185,777,679 Zm00001d049094 GRMZM2G001048 abi36 ABI3-VP1-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 15,846,668 15,849,827 Zm00001d035903 GRMZM2G027253 abi37 ABI3-VP1-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 59,081,485 59,082,159 Zm00001d047359 GRMZM2G142999 abi38 ABI3-VP1-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 127,613,899 127,614,732 Zm00001d007173 GRMZM2G172621 abi39 ABI3-VP1-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 223,808,167 223,823,179 Zm00001d033313 GRMZM2G098063 abi4 ABI3-VP1-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 258,663,739 258,665,853 Zm00001d052591 GRMZM2G328742 abi40 ABI3-VP1-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 193,980,224 193,982,206 Zm00001d023446 GRMZM5G805685 abi41 ABI3-VP1-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,747,841 5,749,899 Zm00001d010077 GRMZM2G098443 abi42 ABI3-VP1-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 98,485,716 98,486,495 Zm00001d048244 GRMZM2G028794 abi43 ABI3-VP1-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 153,119,353 153,121,492 Zm00001d024103 GRMZM2G405170 abi44 ABI3-VP1-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 45,381,410 45,382,084 Zm00001d038504 GRMZM2G174610 abi45 ABI3-VP1-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,797,382 158,802,161 Zm00001d030907 GRMZM2G065496 abi46 ABI3-VP1-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 166,741,910 166,744,810 Zm00001d052750 GRMZM2G125596 abi47 ABI3-VP1-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 199,667,552 199,671,247 Zm00001d044355 GRMZM2G111123 abi48 ABI3-VP1-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 225,696,574 225,699,290 Zm00001d034965 GRMZM2G405699 abi49 ABI3-VP1-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 290,046 293,456 Zm00001d013722 GRMZM2G320754 abi5 ABI3-VP1-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,543,126 18,544,969 Zm00001d035922 GRMZM2G102938 abi50 ABI3-VP1-transcription factor 50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 60,326,794 60,331,273 Zm00001d024321 GRMZM2G173321 abi51 ABI3-VP1-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 64,378,201 64,379,576 GRMZM2G160224 abi6 ABI3-VP1-transcription factor 6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 25,616,688 25,619,269 Zm00001d027939 GRMZM2G109480 abi7 ABI3-VP1-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 18,004,874 18,006,730 Zm00001d027409 GRMZM2G082227 abi8 ABI3-VP1-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,661,492 4,662,475 Zm00001d030908 GRMZM2G522066 abi9 ABI3-VP1-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 166,746,593 166,757,849 Zm00001d044520 GRMZM5G832362 abil1 abelson interactor1-like protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Forestan et al, 2016 Chr3 230,787,798 230,789,802 Zm00001d039498 GRMZM2G132116 abk1 aurora b kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zheng et al., 2016 Chr3 6,001,073 6,005,346 Zm00001d041711 GRMZM2G116204 abp1 auxin binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 134,550,012 134,554,530 Zm00001d023904 GRMZM2G064371 abp4 auxin binding protein homolog4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 27,313,349 27,316,275 Zm00001d023908 GRMZM2G078508 abp5 auxin binding protein homolog5 Chr10 27,502,136 27,505,505 Zm00001d002982 GRMZM2G035688 abph1 aberrant phyllotaxy1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 28,866,474 28,867,724 Zm00001d028744 AC212219.3_FG005 AC212219.3_FG005 Chr1 45,107,095 45,112,661 Zm00001d024518 GRMZM2G079908 acb1 Acyl-CoA-binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 75,760,691 75,762,808 Zm00001d024998 AC197672.3_FG002 acc1 acetyl-coenzyme A carboxylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models chr10 gene homologous to U58598 Chr10 98,541,954 98,563,436 Zm00001d004125 GRMZM5G858094 acc2 acetyl-CoA carboxylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models chr 2 gene with homology to AF359519 Chr2 84,495,887 84,510,274 Zm00001d036955 GRMZM2G164883 acco1 1-aminocyclopropane-1-carboxylate oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yamauchi et al., 2016 Chr6 107,285,582 107,286,760 Zm00001d024853 GRMZM2G166639 acco15 1-aminocyclopropane-1-carboxylate oxidase15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yamauchi et al., 2016 Chr10 90,664,003 90,665,073 Zm00001d020686 GRMZM2G007249 acco2 1-aminocyclopropane-1-carboxylate oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yamauchi et al., 2016 Chr7 128,315,057 128,316,692 Zm00001d052136 GRMZM2G126732 acco20 1-aminocyclopropane-1-carboxylate oxidase20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 180,604,677 180,607,029 Zm00001d024852 GRMZM2G166616 acco3 1-aminocyclopropane-1-carboxylate oxidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yamauchi et al., 2016 Chr10 90,656,251 90,657,509 Zm00001d024843 GRMZM2G072529 acco31 1-aminocyclopropane-1-carboxylate oxidase15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yamauchi et al., 2016 Chr10 90,456,450 90,457,394 Zm00001d018211 GRMZM2G052422 acco35 1-aminocyclopropane-1-carboxylate oxidase35 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT033380 Chr5 216,633,702 216,636,170 Zm00001d024851 GRMZM2G332423 acco4 1-aminocyclopropane-1-carboxylate oxidase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yamauchi et al., 2016 Chr10 90,634,003 90,634,950 Zm00001d021961 GRMZM6G953609 ache1 acetylcholinesterase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models not located to chr in v3 = Zm00001d021961 in v4 Chr7 167,201,658 167,205,003 Zm00001d039266 GRMZM2G175065 acm1 accomplice1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 826,815 835,054 Zm00001d049409 GRMZM2G020801 aco1 aconitase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 29,640,856 29,648,406 Zm00001d024952 GRMZM5G858454 aco2 aconitase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 96,586,361 96,592,679 Zm00001d048358 GRMZM2G009808 aco3 aconitase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF457945 Chr9 154,915,042 154,923,673 Zm00001d006476 GRMZM2G171707 aco5 aconitase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: CO520918 Chr2 209,512,508 209,518,574 Zm00001d046593 AC211394.4_FG004 acp1 acid phosphatase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 97,674,582 97,680,959 Zm00001d032019 GRMZM2G175818 acpt1 acyl carrier protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 209,574,119 209,576,739 Zm00001d039487 GRMZM2G163015 acs1 1-aminocyclopropane-1-carboxylate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yamauchi et al., 2016 Chr3 5,625,096 5,627,096 Zm00001d002592 GRMZM2G164405 acs2 1-aminocyclopropane-1-carboxylate synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY359585 Chr2 16,311,191 16,314,804 Zm00001d045479 GRMZM2G018006 acs3 1-aminocyclopropane-1-carboxylate synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yamauchi et al., 2016 Chr9 23,842,376 23,846,471 Zm00001d033862 GRMZM2G054361 acs6 1-aminocyclopropane-1-carboxylate synthase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 276,519,506 276,521,984 Zm00001d026060 GRMZM5G894619 acs7 1-aminocyclopropane-1-carboxylate synthase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 137,296,427 137,304,511 Zm00001d010159 GRMZM2G126010 act1 actin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 102,413,407 102,417,640 Zm00001d012277 act2 actin2 v4 Chr8 171,775,071 171,778,423 Zm00001d010862 add1 alternative discordia1 Chr8 130,828,250 130,838,826 Zm00001d021497 GRMZM2G117603 adf1 actin depolymerizing factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 154,119,353 154,120,546 Zm00001d006372 GRMZM2G097122 adf2 actin depolymerizing factor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 205,994,533 205,995,809 Zm00001d034644 GRMZM2G060702 adf3 actin depolymerizing factor3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU952653 Chr1 298,705,539 298,708,107 Zm00001d028392 GRMZM2G077942 adf5 actin depolymerizing factor5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 33,147,676 33,150,346 Zm00001d033931 GRMZM2G442658 adh1 alcohol dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 278,821,298 278,825,118 Zm00001d049059 GRMZM2G098346 adh2 alcohol dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 14,333,136 14,336,565 Zm00001d035034 GRMZM2G178192 adk1 adenylate kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 2,462,763 2,465,579 Zm00001d027871 GRMZM2G119852 adss1 adenylosuccinate synthetase Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 16,007,197 16,010,258 Zm00001d003830 GRMZM2G437912 adt6 arogenate dehydratase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Olukolu, BA et al. 2016 Chr2 61,203,599 61,204,879 Zm00001d053301 adxr1 adrenodoxin reductase1 v4; from: EU973445 Chr4 225,026,663 225,038,512 Zm00001d016684 GRMZM2G032628 ae1 amylose extender1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 172,412,995 172,430,415 Zm00001d039133 GRMZM2G059037 afd1 absence of first division1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to cDNA AY788900 | 60202504 (July 2011) Chr6 170,759,206 170,773,388 Zm00001d019163 GRMZM2G340656 aga1 alkaline galactosidase1 Chr7 19,750,770 19,754,324 Zm00001d037480 GRMZM2G127147 aga2 alkaline galactosidase2 Chr6 126,663,869 126,667,210 Zm00001d031300 GRMZM2G037265 aga3 alkaline galactosidase3 Chr1 185,589,046 185,592,963 Zm00001d034564 GRMZM2G077181 aga4 alkaline galactosidase4 Chr1 296,458,782 296,462,896 Zm00001d003277 GRMZM2G047292 aga5 alkaline galactosidase5 Chr2 38,572,522 38,576,707 Zm00001d003279 GRMZM2G311756 aga6 alkaline galactosidase5 Chr2 38,586,400 38,587,859 Zm00001d032608 GRMZM2G095126 agal1 alpha-galactosidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 231,931,416 231,934,263 Zm00001d011096 GRMZM2G162525 ago1 argonaute1 from: BT036371 Chr8 138,816,382 138,824,360 Zm00001d046438 AC189879.3_FG003 ago101 argonaute101 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT069919 Chr9 89,734,202 89,740,800 Zm00001d039214 GRMZM2G141818 ago104 argonaute104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 172,672,133 172,683,962 Zm00001d040429 GRMZM2G089743 ago105 argonaute105 from: BT037796 Chr3 43,101,748 43,117,241 Zm00001d025331 ago106a argonaute106a Chr10 114,363,845 114,370,019 Zm00001d013542 GRMZM2G461936 ago108 argonaute108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhai et al., 2015 Chr5 13,953,891 13,960,814 Zm00001d036917 GRMZM2G079080 ago10b argonaute10b Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhai et al., 2015 Chr6 106,360,618 106,367,670 Zm00001d006351 GRMZM2G105250 ago18a argonaute18a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 205,398,373 205,404,779 Zm00001d033206 GRMZM2G457370 ago18b argonaute18b Gene model association inferred from similarity with B73 RefGen_v3 gene models Char et al., 2016 Chr1 254,172,779 254,178,271 Zm00001d035747 GRMZM2G441583 ago1a argonaute1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Xu et al., 2016 Chr6 44,780,803 44,789,355 Zm00001d026111 AC209206.3_FG011 ago1b argonaute1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Xu et al., 2016 Chr10 138,699,397 138,708,217 Zm00001d002650 GRMZM2G039455 ago1c argonaute1c Gene model association inferred from similarity with B73 RefGen_v3 gene models Xu et al., 2016 Chr2 18,176,301 18,185,185 Zm00001d014875 GRMZM2G361518 ago1d argonaute1d Gene model association inferred from similarity with B73 RefGen_v3 gene models Xu et al., 2016 Chr5 66,763,342 66,769,045 Zm00001d002316 GRMZM2G007791 ago2a argonaute2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhai et al., 2015 Chr2 10,157,520 10,164,911 Zm00001d026300 GRMZM2G354867 ago2b argonaute2b Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhai et al., 2015 Chr10 143,197,942 143,203,163 Zm00001d008249 GRMZM2G589579 ago4a argonaute4a Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhai et al., 2015 Chr8 2,667,303 2,674,772 Zm00001d007786 GRMZM2G059033 ago5b argonaute5b Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhai et al., 2015 Chr2 239,622,069 239,628,992 Zm00001d013063 GRMZM2G123063 ago5c argonaute5c Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhai et al., 2015 Chr5 4,109,487 4,117,972 Zm00001d019905 GRMZM2G347402 ago6 argonaute6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhai et al., 2015 Chr7 74,375,269 74,402,681 Zm00001d005546 GRMZM2G106213 agp1 ADP glucose pyrophosphorylase small subunit embryo 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Huang et al 2014 Chr2 178,195,810 178,206,466 Zm00001d039131 GRMZM2G027955 agp2 ADP glucose pyrophosphorylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from W21619 Chr6 170,732,907 170,739,381 Zm00001d033910 GRMZM2G391936 agpll1 ADP glucose pyrophosphorylase large subunit leaf1AGPL4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Huang et al. 2014 Chr1 278,289,784 278,294,463 Zm00001d019266 GRMZM2G144002 agpll2 ADP glucose pyrophosphorylase large subunit leaf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Huang et al. 2014 Chr7 24,811,760 24,822,600 Zm00001d032385 GRMZM2G163437 agpsl1 ADP glucose pyrophosphorylase small subunit leaf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AF334960 Chr1 224,920,493 224,925,108 Zm00001d012689 GRMZM2G302639 agrr21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 178,701,046 178,703,315 Zm00001d049239 GRMZM2G015295 ahh1 adenosyl homocysteine hydrolase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 22,371,774 22,374,938 Zm00001d033780 GRMZM2G044569 AI665421 Chr1 273,607,369 273,612,057 Zm00001d006789 GRMZM2G464000 AI668346 Chr2 216,680,792 216,695,299 Zm00001d012811 GRMZM5G862317 AI676903 Chr5 688,154 696,271 Zm00001d003590 GRMZM2G005346 AI714808 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 49,123,838 49,128,914 Zm00001d043327 GRMZM2G052365 AI770795 Chr3 196,589,524 196,606,761 Zm00001d042511 GRMZM2G064936 AI770873 Chr3 170,268,292 170,271,282 Zm00001d023538 GRMZM2G118286 AI795367 Chr10 9,347,497 9,371,362 Zm00001d030888 GRMZM2G443525 AI855190 Chr1 165,741,227 165,745,488 Zm00001d005908 GRMZM6G177089 AI861369 Gene model association inferred from similarity with B73 RefGen_v3 gene models Annotation questioned Chr2 192,405,455 192,408,359 Zm00001d048532 GRMZM2G113245 AI901738 Chr9 157,944,066 157,946,367 Zm00001d030310 GRMZM2G129413 aic1 auxin import carrier1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Leiboff et al., 2015 Chr1 121,458,401 121,462,310 Zm00001d053004 GRMZM2G045057 aic2 auxin import carrier2 Chr4 208,649,304 208,651,866 Zm00001d021877 GRMZM2G061234 ak1 Adenylyl-sulfate kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF178976 Chr7 165,265,600 165,277,445 Zm00001d053962 GRMZM2G019838 ak2 ankyrin repeat protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 244,374,970 244,377,279 Zm00001d050134 GRMZM2G437977 akh1 aspartate kinase-homoserine dehydrogenase1 Chr4 68,237,414 68,255,070 Zm00001d005535 GRMZM2G104546 akh2 aspartate kinase homoserine dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 177,655,850 177,675,449 Zm00001d034896 GRMZM2G047774 akin1 AKINbetagamma-1 protein kinase Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 305,008,203 305,016,567 Zm00001d028733 GRMZM2G107867 akin2 AKINbetagamma-1 protein kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 44,554,395 44,560,803 Zm00001d036024 GRMZM2G052812 akr1 aldo/keto reductase AKR1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 66,752,688 66,763,432 Zm00001d012572 GRMZM2G091054 al9 aleurone9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: FN400767 Chr8 176,808,613 176,813,009 Zm00001d042453 GRMZM2G057823 ald1 aldolase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 168,340,504 168,343,022 Zm00001d012103 GRMZM2G066024 ald2 aldolase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 168,303,869 168,306,204 Zm00001d051754 GRMZM2G125268 aldh2 aldehyde dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF348417 Chr4 168,916,658 168,926,460 Zm00001d044339 GRMZM2G071021 aldh3 aldehyde dehydrogenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF348413 Chr3 225,456,709 225,460,729 Zm00001d044340 GRMZM2G097706 aldh5 aldehyde dehydrogenase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,468,766 225,476,879 Zm00001d037537 GRMZM2G148810 alf1 Alfin-like-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 128,609,292 128,613,832 Zm00001d025504 GRMZM2G050495 alf10 Alfin-like-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,752,672 120,758,078 Zm00001d010241 GRMZM2G158918 alf11 Alfin-like-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 105,685,601 105,692,553 Zm00001d008646 GRMZM5G893976 alf12 Alfin-like-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 15,709,776 15,717,221 Zm00001d042582 GRMZM2G080917 alf13 Alfin-like-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 172,730,778 172,735,201 Zm00001d025491 GRMZM2G156088 alf14 Alfin-like-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,497,307 120,504,861 Zm00001d034627 AC225147.4_FG003 alf15 Alfin-like-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 298,407,976 298,412,063 Zm00001d025492 GRMZM2G016564 alf16 Alfin-like-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,544,589 120,545,246 Zm00001d012979 GRMZM2G110952 alf17 Alfin-like-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,666,357 2,681,120 Zm00001d049007 GRMZM2G008259 alf18 Alfin-like-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 12,330,907 12,332,675 Zm00001d005185 GRMZM2G047316 alf19 Alfin-like-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 162,911,443 162,914,557 Zm00001d016861 GRMZM2G063864 alf2 Alfin-like-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 178,509,709 178,513,664 Zm00001d022110 GRMZM2G038066 alf3 Alfin-like-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 170,567,006 170,573,897 Zm00001d041767 GRMZM2G153087 alf4 Alfin-like-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 136,598,676 136,603,856 Zm00001d038208 GRMZM2G016817 alf5 Alfin-like-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,703,542 151,710,829 Zm00001d023962 GRMZM2G115424 alf6 Alfin-like-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 32,089,437 32,094,242 Zm00001d050816 GRMZM2G107807 alf7 Alfin-like-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 124,419,619 124,423,060 Zm00001d012196 GRMZM2G172001 alf8 Alfin-like-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,919,970 169,924,239 Zm00001d010834 GRMZM2G017142 alf9 Alfin-like-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 129,331,385 129,334,443 Zm00001d029083 GRMZM2G030571 algt1 alanine--glyoxylate aminotransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_V2 alignment to EU972920 Chr1 57,394,910 57,397,707 Zm00001d026635 GRMZM2G173413 alla1 allantoinase1 Chr10 149,245,574 149,250,456 Zm00001d023376 GRMZM2G003762 alp1 aluminum-induced protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 4,272,268 4,274,843 Zm00001d050567 GRMZM2G143357 als1 acetolactate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 101,325,893 101,328,003 Zm00001d016572 GRMZM2G143008 als2 acetolactate synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 167,860,552 167,862,743 Zm00001d006875 GRMZM2G124963 alt10 alanine aminotransferase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Tausta et al 2014 Chr2 218,327,505 218,332,462 Zm00001d014258 GRMZM2G088064 alt4 L-alanine:2-oxoglutarate aminotransferase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of B73_v2 to AF055898 and EU962513 Chr5 38,466,701 38,476,589 Zm00001d014258 GRMZM2G088028 alt5 alanine aminotransferase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of B73_v2 to EU954010 Chr5 38,466,701 38,476,589 Zm00001d018639 GRMZM2G120563 alt7 alanine aminotransferase7 from alignment to EU969863 from alignment to EU969863 Chr7 1,414,460 1,422,894 Zm00001d007937 GRMZM5G840582 alt8 alanine amino transferase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to of B73_v2 to Duff et al sequence listed as gi|21213577 Chr2 243,428,038 243,433,183 Zm00001d022152 GRMZM2G053999 alt9 alanine aminotransferase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Tausta et al 2014 Chr7 171,321,714 171,327,952 Zm00001d013659 GRMZM5G883855 am1 ameiotic1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 16,553,269 16,560,294 Zm00001d005792 GRMZM2G060400 ami1 amidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models one of 2 gene models that match protein accession ACR34426 on B73 reference genome_v2 (MLS June 2012) Chr2 188,842,874 188,845,587 Zm00001d020586 GRMZM2G137676 ami2 amidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models one of 2 gene models that align to protein accession ACR34426 (MLS June 2012) Chr7 123,729,032 123,731,282 Zm00001d025103 GRMZM2G359298 amo1 amine oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 104,219,161 104,224,390 Zm00001d025831 GRMZM2G175140 amt1 ammonium transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Gu et al., 2013 Chr10 131,243,971 131,245,467 Zm00001d017249 GRMZM2G028736 amt2 ammonium transporter2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Gu et al., 2013 Chr5 190,317,987 190,319,453 Zm00001d003025 GRMZM2G118950 amt3 ammonium transporter3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Gu et al., 2013 Chr2 29,747,763 29,749,475 Zm00001d002964 GRMZM2G062024 amt4 ammonium transporter4 Chr2 28,238,409 28,241,298 Zm00001d025894 GRMZM2G164743 amt5 ammonium transporter5 Chr10 133,222,842 133,243,011 Zm00001d005890 GRMZM2G138468 amya3 alpha amylase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 191,852,046 191,853,897 Zm00001d027619 GRMZM2G450125 amyb2 beta amylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU957499 Chr1 9,119,707 9,122,688 Zm00001d039265 GRMZM2G175218 amyb4 beta amylase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100192000 Chr3 822,132 826,368 Zm00001d021702 GRMZM2G058310 amyb5 beta amylase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 160,752,742 160,758,067 Zm00001d032961 GRMZM2G081554 an1 anther ear1 Gene model association inferred from similarity with B73 RefGen_v3 gene models based on genomic DNA sequence of cloned gene Chr1 244,858,795 244,867,417 Zm00001d053331 GRMZM2G039942 ane1 androgenic embryo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 226,420,587 226,421,326 Zm00001d024607 GRMZM2G372553 ane3 androgenic embryo3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 80,160,170 80,160,624 Zm00001d003395 GRMZM2G325131 ans1 anthranilate synthase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU965109 Chr2 42,789,053 42,794,069 GRMZM2G171383 ans2 anthranilate synthase component II homolog2 from DV174707 Chr10 123,312,541 123,317,141 Zm00001d024028 GRMZM2G049892 ans3 anthranilate synthase component II homolog2 Chr10 37,894,909 37,899,157 Zm00001d017857 GRMZM5G837108 ant1 adenine nucleotide translocator1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From: EU952880 Chr5 208,984,585 208,987,631 Zm00001d051685 GRMZM2G135186 ant2 adenine nucleotide translocator2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 166,706,837 166,709,814 Zm00001d037211 GRMZM2G064993 anx1 annexin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 115,981,077 115,984,636 Zm00001d018090 GRMZM2G061950 anx2 annexin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 214,042,874 214,045,954 Zm00001d034387 GRMZM2G141535 ao1 aldehyde oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to mRNA sequence accession D88451 (MLS May 2012) Chr1 291,605,273 291,613,251 Zm00001d013098 GRMZM5G899851 ao2 aldehyde oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr5 4,694,181 4,700,885 Zm00001d034385 GRMZM2G019799 ao3 aldehyde oxidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models includes SNP pzb01403.4, associated with locus (Setter et al 2013; MLS 2013) Chr1 291,510,737 291,518,900 Zm00001d034388 GRMZM2G141473 ao4 aldehyde oxidase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr1 291,662,839 291,670,088 Zm00001d018869 GRMZM2G406830 ao5 aldehyde oxidase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr7 7,849,925 7,861,720 Zm00001d029594 GRMZM2G077316 aoc1 allene oxide cyclase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of AY103942 to B73_v2 Chr1 78,239,819 78,241,044 Zm00001d048021 GRMZM2G067225 aos1 allene oxide synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Christensen et al.2015 Chr9 148,185,906 148,187,354 Zm00001d028282 GRMZM2G002178 aos2 allene oxide synthesis2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of DQ658738 to B73_v2 chr1 hit Chr1 29,125,756 29,127,204 Zm00001d034186 GRMZM2G376661 aos3 allene oxide synthesis3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Christensen et al., 2015 Chr1 285,956,186 285,957,745 Zm00001d034184 GRMZM2G072653 aos4 allene oxide synthesis4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Christensen et al., 2015 Chr1 285,946,538 285,948,088 Zm00001d017727 AC233960.1_FG002 aox1 alternative oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence accession AY059646 Chr5 205,304,084 205,306,760 Zm00001d002436 GRMZM2G125669 aox2 alternative oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence accession AY059647 Chr2 12,637,877 12,640,584 Zm00001d002434 GRMZM2G074743 aox3 alternative oxidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence accession AY059648 Chr2 12,564,577 12,567,196 Zm00001d007270 AC195874.2_FG002 ap17 clathrin coat assembly protein AP17 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU959074 Chr2 226,300,833 226,306,935 Zm00001d031071 GRMZM2G082998 apg1 albino or pale green mutant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr1 175,969,709 175,971,563 Zm00001d002317 GRMZM2G007453 apo1 accumulation of photosystem one1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Watkins et al 2011 Chr2 10,169,661 10,178,662 Zm00001d021596 AC189750.4_FG004 aprl1 adenosine 5'-phosphosulfate reductase-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739296 Chr7 157,694,972 157,698,287 Zm00001d006467 GRMZM2G087254 aprl2 adenosine 5'-phosphosulfate reductase-like2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739297 Chr2 209,132,700 209,135,945 Zm00001d052215 GRMZM2G042582 aprl3 adenosine 5'-phosphosulfate reductase-like3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739298 Chr4 183,479,773 183,481,948 Zm00001d018099 GRMZM2G159535 aprl4 adenosine 5'-phosphosulfate reductase-like4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739299 Chr5 214,157,648 214,160,124 Zm00001d032303 GRMZM2G085249 aprl5 adenosine 5'-phosphosulfate reductase-like5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 221,288,907 221,296,871 Zm00001d023853 GRMZM2G141848 aprl6 adenosine 5'-phosphosulfate reductase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 606422 Chr10 25,081,643 25,084,377 Zm00001d041690 GRMZM2G155073 aprl7 adenosine 5'-phosphosulfate reductase-like7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739302 Chr3 133,491,020 133,493,729 Zm00001d034525 GRMZM2G046231 aprl8 adenosine 5'-phosphosulfate reductase-like8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739303 & Entrez Gene 606423 Chr1 295,633,173 295,636,319 Zm00001d013043 GRMZM2G025248 aprl9 adenosine 5'-phosphosulfate reductase-like9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739304 Chr5 3,626,153 3,629,045 Zm00001d003108 GRMZM2G170101 aprt1 adenine phosphoribosyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 32,464,010 32,470,101 Zm00001d033981 GRMZM2G149952 aps1 ATP sulfurylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU973074 Chr1 279,982,395 279,986,186 Zm00001d047468 GRMZM2G448687 apt1 aberrant pollen transmission1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 131,003,201 131,026,782 Zm00001d047757 GRMZM2G054300 apx1 ascorbate peroxidase homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to EU966070 Chr9 141,020,616 141,024,529 Zm00001d007234 GRMZM2G140667 apx2 ascorbate peroxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Z34934 Chr2 225,336,968 225,339,744 Zm00001d028709 GRMZM2G137839 apx3 ascorbate peroxidase homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to EU973991 Chr1 43,901,180 43,904,278 Zm00001d019081 GRMZM2G316256 apx4 ascorbate peroxidase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xu et al., 2017 Chr7 15,567,291 15,568,030 Zm00001d038867 GRMZM2G093346 apx5 Cytosolic ascorbate peroxidase5 Chr6 166,103,499 166,106,031 Zm00001d034638 GRMZM2G061900 ara3 ras-related protein ARA-3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,677,159 298,680,740 Zm00001d013007 GRMZM2G395844 arf1 ADP-ribosylation factor homolog1 Chr5 3,149,161 3,151,741 Zm00001d031522 GRMZM2G169820 arftf1 ARF-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,746,884 192,762,316 Zm00001d042267 GRMZM2G338259 arftf10 ARF-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 158,098,798 158,103,660 Zm00001d043431 GRMZM2G056120 arftf11 ARF-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 199,611,426 199,617,608 Zm00001d043922 GRMZM2G437460 arftf12 ARF-transcription factor 12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 213,879,427 213,887,358 Zm00001d049295 GRMZM2G378580 arftf13 ARF-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 24,981,833 24,987,633 Zm00001d050781 GRMZM2G137413 arftf14 ARF-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 122,461,155 122,466,889 Zm00001d051172 GRMZM2G081406 arftf15 ARF-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 147,112,461 147,115,250 Zm00001d053819 GRMZM2G028980 arftf16 ARF-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 241,710,056 241,716,042 Zm00001d014013 GRMZM2G159399 arftf17 ARF-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 28,634,910 28,639,671 Zm00001d014377 GRMZM2G035405 arftf18 ARF-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 43,566,076 43,572,737 Zm00001d014507 GRMZM2G013663 arftf19 ARF-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models merged into Zm00001d014507 in v4 per NCBI 100280136 Chr5 50,795,874 50,799,332 Zm00001d032683 GRMZM2G153233 arftf2 ARF-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 234,266,863 234,271,357 Zm00001d015243 GRMZM2G102845 arftf20 ARF-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 80,676,960 80,685,239 Zm00001d000358 GRMZM2G390641 arftf21 ARF-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg115 30,305 33,567 Zm00001d036593 GRMZM2G089640 arftf22 ARF-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,920,665 93,928,357 Zm00001d038698 GRMZM2G441325 arftf23 ARF-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,803,581 162,809,813 Zm00001d039006 GRMZM2G030710 arftf24 ARF-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,658,572 168,663,801 Zm00001d011953 GRMZM2G116557 arftf25 ARF-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 164,990,904 164,996,249 Zm00001d012731 GRMZM5G874163 arftf26 ARF-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 179,454,361 179,460,511 Zm00001d045026 GRMZM2G160005 arftf27 ARF-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 10,505,361 10,517,524 Zm00001d023659 GRMZM2G006042 arftf28 ARF-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 13,876,466 13,882,683 Zm00001d026540 GRMZM2G086949 arftf29 ARF-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,919,136 147,925,555 Zm00001d001879 GRMZM2G078274 arftf3 ARF-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 2,248,003 2,256,074 Zm00001d026590 GRMZM2G475882 arftf30 ARF-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,523,746 148,532,791 Zm00001d026687 GRMZM2G023813 arftf31 ARF-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 149,949,300 149,951,152 Zm00001d030803 GRMZM2G181254 arftf32 ARF-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 160,596,383 160,597,405 Zm00001d030801 GRMZM2G179121 arftf33 ARF-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 160,336,523 160,338,525 Zm00001d031064 GRMZM2G081158 arftf34 ARF-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 175,371,170 175,379,288 Zm00001d014690 GRMZM2G317900 arftf35 ARF-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 59,249,984 59,258,522 Zm00001d016838 GRMZM2G702026 arftf36 ARF-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 177,880,117 177,886,035 Zm00001d019539 GRMZM2G075715 arftf37 ARF-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 41,205,295 41,210,099 Zm00001d025871 GRMZM2G005284 arftf38 ARF-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,193,858 132,195,808 Zm00001d001945 GRMZM2G034840 arftf4 ARF-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,367,272 3,374,233 Zm00001d002929 GRMZM5G808366 arftf5 ARF-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 26,786,830 26,791,581 Zm00001d003011 GRMZM2G122614 arftf6 ARF-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 29,384,400 29,385,005 Zm00001d039267 GRMZM2G475263 arftf7 ARF-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 838,392 842,742 Zm00001d041056 GRMZM2G352159 arftf8 ARF-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 93,516,867 93,523,481 Zm00001d041497 GRMZM2G073750 arftf9 ARF-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 124,224,716 124,231,074 Zm00001d032832 GRMZM2G365731 arid1 ARID-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 239,629,217 239,639,245 Zm00001d046719 GRMZM5G883993 arid10 ARID-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 103,323,268 103,329,526 Zm00001d005794 GRMZM2G140156 arid2 ARID-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 188,896,263 188,907,951 Zm00001d051632 GRMZM2G110109 arid3 ARID-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 165,121,574 165,126,113 Zm00001d020593 GRMZM2G138976 arid4 ARID-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 123,984,904 123,993,063 Zm00001d017831 GRMZM2G421899 arid5 ARID-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,057,546 208,063,084 Zm00001d016456 GRMZM2G024976 arid6 ARID-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 162,962,741 162,970,452 Zm00001d014900 GRMZM2G466292 arid7 ARID-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 67,332,284 67,363,587 Zm00001d036790 GRMZM2G180654 arid8 ARID-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 100,942,359 100,948,393 Zm00001d032096 GRMZM5G866423 arid9 ARID-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,544,489 212,560,643 Zm00001d014734 GRMZM2G084942 arodh1 arogenate dehydrogenase1 Chr5 61,099,110 61,100,192 Zm00001d014737 GRMZM2G085117 arodh2 arogenate dehydrogenase2 Chr5 61,117,986 61,119,432 Zm00001d036439 GRMZM2G365961 arodh3 arogenate dehydrogenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 88,560,354 88,561,488 Zm00001d046168 GRMZM2G324297 arodh4 arogenate dehydrogenase4 Chr9 68,800,140 68,802,556 Zm00001d027326 GRMZM2G015384 arp4 actin related protein like4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen et al., 2015 Chr1 2,977,014 2,997,162 Zm00001d014112 GRMZM2G015861 arp7 actin-related protein like7 Chr5 32,942,679 32,952,221 Zm00001d035201 GRMZM2G066460 arpp0 60S acidic ribosomal protein P0 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Y07959 Chr6 9,611,943 9,614,439 Zm00001d035087 GRMZM2G032315 arpp1a acidic ribosomal protein P1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 4,639,411 4,640,898 Zm00001d009653 GRMZM2G119809 arpp2a acidic ribosomal protein P2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 74,612,588 74,614,857 Zm00001d009652 GRMZM2G102891 arpp2a-2 acidic ribosomal protein P2a-2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U62748 Chr8 74,457,985 74,460,428 Zm00001d001899 GRMZM2G010257 arpp2a-3 acidic ribosomal protein P2a-3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U62749 Chr2 2,559,817 2,561,845 Zm00001d010128 GRMZM2G114954 arpp2b acidic ribosomal protein P2b (rpp2b) Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U62753 Chr8 100,554,189 100,558,541 Zm00001d014679 GRMZM2G077208 arpp3 acidic ribosomal protein P3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U62751 Chr5 58,659,914 58,661,357 Zm00001d048346 GRMZM2G126821 arpp40 acidic ribosomal protein P40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,820,912 154,823,371 Zm00001d048046 GRMZM2G126834 arr1 ARR-B-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 148,718,695 148,724,289 Zm00001d045112 GRMZM2G409974 arr2 ARR-B-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 13,117,991 13,122,682 Zm00001d046755 GRMZM2G360523 arr4 ARR-B-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 104,439,437 104,448,739 Zm00001d014723 GRMZM2G133262 arr5 ARR-B-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 60,590,272 60,603,467 Zm00001d042463 GRMZM2G177220 arr6 ARR-B-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 168,517,515 168,521,580 Zm00001d012128 GRMZM2G100318 arr7 ARR-B-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,571,952 168,576,042 Zm00001d018380 GRMZM2G479110 arr8 ARR-B-transcription factor 8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 219,584,158 219,587,472 Zm00001d020772 GRMZM2G140633 asc1 asceapen1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 alignment to AW076338 Chr7 131,855,551 131,857,649 Zm00001d031223 GRMZM2G423476 asg11 Chr1 182,657,007 182,661,933 Zm00001d025425 GRMZM2G330424 asg2 Chr10 118,293,926 118,295,084 Zm00001d053603 GRMZM2G343139 asg22 Chr4 236,105,402 236,116,126 Zm00001d029721 GRMZM2G418289 asg3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 84,037,187 84,040,069 Zm00001d029196 GRMZM5G885628 asg30b Chr1 61,783,914 61,789,718 Zm00001d019057 GRMZM2G054267 asg34a(msd) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 14,373,489 14,374,835 Zm00001d053936 GRMZM2G133958 asg41 Chr4 243,883,854 243,885,686 Zm00001d025369 GRMZM2G049681 asg42 Chr10 115,865,914 115,869,725 Zm00001d047932 GRMZM2G104618 asg44 Chr9 145,659,608 145,660,585 Zm00001d039698 GRMZM2G158342 asg48a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 12,378,113 12,379,918 Zm00001d020775 GRMZM2G003869 asg49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 132,100,220 132,104,288 Zm00001d031372 GRMZM2G134205 asg58 Chr1 187,621,387 187,624,780 Zm00001d031771 GRMZM2G379237 asg62 Chr1 201,315,011 201,316,276 Zm00001d046501 asg63a Chr9 92,852,327 92,853,497 Zm00001d039335 GRMZM2G412073 asg64 Chr3 2,038,756 2,040,110 Zm00001d013362 GRMZM2G122863 asg73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 9,689,173 9,690,393 Zm00001d029140 GRMZM5G882821 asg75 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 60,225,658 60,228,992 Zm00001d039147 GRMZM2G158998 asg7a Chr6 171,041,056 171,048,997 Zm00001d005151 GRMZM2G052935 ask2 aspartate kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 161,363,227 161,368,845 Zm00001d045675 GRMZM2G074589 asn1 asparagine synthetase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 32,681,291 32,690,688 Zm00001d044608 GRMZM2G093175 asn2 asparagine synthetase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 233,328,410 233,331,483 Zm00001d028750 GRMZM2G053669 asn3 asparagine synthetase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 45,286,331 45,290,076 Zm00001d047736 GRMZM2G078472 asn4 asparagine synthetase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 140,319,258 140,322,843 Zm00001d025063 GRMZM2G052166 asrp1 arginine/serine-rich splicing factor1 Chr10 102,254,458 102,258,676 Zm00001d004477 GRMZM2G021223 asrp2 arginine/serine-rich splicing factor2 Chr2 114,362,210 114,365,356 Zm00001d002038 GRMZM2G395114 ast91 anti-sigma factor antagonist domain of sulfate transporter91 Gene model association inferred from similarity with B73 RefGen_v3 gene models Purduns et al., 2015 Chr2 4,861,458 4,865,979 Zm00001d025765 GRMZM2G066059 atg10 autophagy10 Chr10 128,934,892 128,936,806 Zm00001d051033 GRMZM2G160174 atg101 autophagy101 Chr4 137,842,313 137,846,513 Zm00001d053741 GRMZM2G143445 atg11a autophagy11a Chr4 240,158,918 240,164,128 Zm00001d015493 GRMZM2G119571 atg11b autophagy11b Chr5 93,597,362 93,602,535 Zm00001d018259 GRMZM5G842517 atg12 autophagy12 Li et al., 2015 Chr5 217,540,268 217,543,540 Zm00001d051307 GRMZM2G129675 atg13a autophagy13a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 152,668,573 152,674,431 Zm00001d017403 GRMZM2G109348 atg13b autophagy13b Chr5 194,992,409 194,999,989 Zm00001d002819 GRMZM5G825909 atg13c autophagy13c Chr2 23,558,116 23,563,958 Zm00001d025950 GRMZM2G000973 atg13d autophagy13d Chr10 134,553,869 134,559,580 Zm00001d053173 GRMZM2G044733 atg13e autophagy13e Chr4 218,017,452 218,021,002 Zm00001d004856 GRMZM2G125352 atg13f autophagy13f Chr2 145,083,433 145,087,343 Zm00001d033994 GRMZM2G078252 atg16L autophagy16L Chr1 280,605,377 280,608,220 Zm00001d011920 GRMZM2G122607 atg18a autophagy18a Chr8 164,595,644 164,600,231 Zm00001d042215 GRMZM2G146280 atg18b autophagy18b Chr3 156,417,053 156,421,558 Zm00001d039703 GRMZM2G069177 atg18c autophagy18c Chr3 12,596,468 12,600,760 Zm00001d008691 GRMZM2G143211 atg18d autophagy18d Chr8 17,288,750 17,293,014 Zm00001d018355 GRMZM2G018573 atg18e autophagy18e Chr5 219,132,562 219,138,725 Zm00001d043239 GRMZM2G116700 atg18f autophagy18f Chr3 192,795,025 192,801,090 Zm00001d038156 GRMZM5G815032 atg18g autophagy18g Chr6 149,721,375 149,731,447 Zm00001d010315 GRMZM2G078468 atg18h autophagy18h Chr8 109,278,193 109,288,346 GRMZM2G301031 atg18i autophagy18i Chr1 236,282,952 236,289,928 Zm00001d010645 GRMZM2G103793 atg18j autophagy18j Chr8 122,851,051 122,852,068 Zm00001d027415 GRMZM2G105415 atg1a autophagy1a Chr1 4,832,874 4,838,381 Zm00001d028570 GRMZM2G160428 atg1b autophagy1b Chr1 39,410,431 39,417,092 Zm00001d047833 GRMZM2G164160 atg1c autophagy1c Chr9 142,784,493 142,792,921 Zm00001d026677 GRMZM2G104658 atg1t autophagy1t Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,751,381 149,758,192 Zm00001d037321 GRMZM2G426483 atg2 autophagy2 Chr6 120,999,149 121,016,423 Zm00001d000178 GRMZM5G818887 atg3 autophagy3 B73V4_ctg181 132,473 138,116 Zm00001d001790 GRMZM2G064212 atg4a autophagy4a Chr2 1,019,499 1,023,493 Zm00001d026641 GRMZM2G173682 atg4b autophagy4b Chr10 149,273,828 149,277,821 Zm00001d015009 GRMZM2G098420 atg5 autophagy5 Chr5 72,040,325 72,044,623 Zm00001d042303 GRMZM2G092112 atg6a autophagy6a Chr3 160,015,501 160,021,474 Zm00001d011984 GRMZM2G027857 atg6b autophagy6b Chr8 165,880,817 165,889,059 Zm00001d011347 GRMZM2G005304 atg7 autophagy7 Chr8 147,387,271 147,396,132 Zm00001d006474 GRMZM2G336871 atg8a autophagy8a Li et al., 2015 Chr2 209,341,868 209,344,124 Zm00001d026335 GRMZM2G419694 atg8b autophagy8b Chr10 143,747,463 143,750,718 Zm00001d002257 GRMZM2G076826 atg8c autophagy8c Chr2 9,067,800 9,076,270 Zm00001d024239 GRMZM2G134613 atg8d autophagy8d Chr10 59,002,720 59,005,171 Zm00001d049405 GRMZM2G014975 atg8e autophagy8e Chr4 29,550,441 29,552,705 Zm00001d028417 GRMZM2G035461 atg9 autophagy9 Chr1 34,216,191 34,223,589 Zm00001d042809 GRMZM2G127949 atl1 auxin transporter-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 180,800,042 180,806,507 Zm00001d040166 GRMZM2G464523 atm1 ataxia-telangiectasia mutated1 Chr3 30,043,617 30,172,018 Zm00001d041882 GRMZM2G101020 atp1 ATPase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to EU962507 Chr3 142,230,896 142,233,815 Zm00001d038929 GRMZM2G113408 atp2 ATP synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: entrez gene 542267 Chr6 167,164,721 167,168,568 Zm00001d006439 GRMZM2G171628 atp3 ATP synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT062053 Chr2 208,238,550 208,242,017 Zm00001d028221 GRMZM2G128665 atp4 ATP synthase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zoschke et al., 2012 Chr1 27,049,419 27,051,494 Zm00001d018069 GRMZM5G862663 atpc1 ATP synthase chloroplast subunit1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X66005 Chr5 213,760,677 213,761,423 Zm00001d021620 GRMZM2G048907 atpc2 ATP synthase chloroplast subunit2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr7 158,179,238 158,180,317 Zm00001d014813 GRMZM2G340282 atr1 ataxia-telangiectasia mutated and RAD3-related1 Chr5 64,068,899 64,100,088 Zm00001d008941 GRMZM2G372928 atx3 arabidopsis trithorax homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 26,152,233 26,180,018 Zm00001d039355 GRMZM2G085266 atx4 arabidopsis trithorax homolog4 part of Zm00001d039355 in v4; Chen et al, 2017 Chr3 2,451,357 2,465,548 Zm00001d011490 GRMZM6G025093 atx5 arabidopsis trithorax homolog5 v4 part of Zm00001d011490 in v4 Chr8 152,111,717 152,120,844 Zm00001d033572 GRMZM2G063298 auxrp1 auxin-regulated protein1 Chr1 267,360,211 267,364,567 Zm00001d038292 GRMZM2G106218 AW036917 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,563,038 153,569,387 Zm00001d018438 GRMZM2G150876 AW065811 Chr5 220,885,277 220,890,325 Zm00001d048536 GRMZM2G055785 AW216329 Chr9 158,039,146 158,055,540 Zm00001d023373 GRMZM2G003732 AW225120 Chr10 4,236,920 4,263,190 Zm00001d010492 GRMZM2G140590 AW231791 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 117,765,218 117,780,166 Zm00001d046742 GRMZM2G180863 AW257883 Chr9 104,063,170 104,067,761 Zm00001d018842 GRMZM5G878044 AW308691 Chr7 6,969,124 6,973,970 Zm00001d023314 GRMZM2G058595 AW330564 Chr10 2,775,081 2,777,402 Zm00001d028925 AW400087 Chr1 51,729,487 51,730,402 Zm00001d004785 GRMZM2G472770 AW681281 Chr2 139,099,237 139,105,284 Zm00001d046697 GRMZM2G033555 AY103770 Chr9 102,852,827 102,859,765 Zm00001d003106 GRMZM2G352129 AY103944 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 32,427,063 32,432,492 Zm00001d010618 GRMZM2G132759 AY104017 Chr8 122,041,622 122,047,006 Zm00001d015006 GRMZM2G044348 AY104079 Chr5 72,018,095 72,023,626 Zm00001d003031 GRMZM2G059365 AY104214 Chr2 29,817,833 29,830,611 Zm00001d038972 GRMZM2G464572 AY104289 Chr6 168,004,770 168,021,297 Zm00001d031480 GRMZM2G124557 AY104360 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 191,518,541 191,521,006 Zm00001d004344 GRMZM2G050131 AY104386 Chr2 105,273,286 105,274,644 Zm00001d018795 GRMZM2G012031 AY104465 Chr7 5,365,547 5,386,515 Zm00001d010804 GRMZM2G319747 AY104566 Chr8 128,347,494 128,353,068 Zm00001d036888 GRMZM2G106427 AY104775 Chr6 105,645,382 105,658,474 Zm00001d038616 GRMZM2G701221 AY104923 Chr6 160,984,295 160,985,107 Zm00001d037509 GRMZM2G063754 AY105479 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 127,637,988 127,641,192 Zm00001d019225 GRMZM2G173967 AY105589 Chr7 22,609,239 22,613,134 Zm00001d038685 GRMZM2G120175 AY105728 Chr6 162,571,773 162,577,138 Zm00001d024274 GRMZM2G146115 AY105746 Chr10 61,030,755 61,038,775 Zm00001d038689 GRMZM2G176396 AY105785 Chr6 162,605,299 162,610,720 Zm00001d018409 GRMZM2G027282 AY105910 Chr5 220,204,813 220,209,169 Zm00001d052796 GRMZM2G140545 AY105971 Chr4 201,214,849 201,216,177 Zm00001d002553 GRMZM2G303118 AY106040 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 15,281,181 15,287,925 Zm00001d019568 GRMZM2G069676 AY106170 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 43,298,735 43,322,873 Zm00001d042476 GRMZM2G059108 AY106230 Chr3 168,999,383 169,003,373 Zm00001d039303 AY106313 Chr3 1,394,245 1,395,354 Zm00001d025762 GRMZM2G070255 AY106712 Chr10 128,649,921 128,650,496 Zm00001d025893 GRMZM2G164714 AY106733 Chr10 133,218,764 133,222,199 Zm00001d028708 AY106736 v4 alignment to AY106736 Chr1 43,891,995 43,892,168 Zm00001d034662 GRMZM2G068117 AY106825 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 299,188,693 299,193,386 Zm00001d040829 GRMZM2G156251 AY106948 Chr3 68,286,049 68,295,110 Zm00001d002811 GRMZM2G404973 AY107034 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 23,362,233 23,364,607 Zm00001d037384 GRMZM2G383404 AY107053 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 123,931,487 123,933,195 Zm00001d053561 GRMZM2G085718 AY107200 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 234,194,672 234,201,038 Zm00001d017167 GRMZM2G007466 AY107329 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 187,781,967 187,787,211 Zm00001d028907 GRMZM2G394212 AY107489 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 50,514,018 50,524,361 Zm00001d045072 GRMZM2G467169 AY107496 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,555,037 11,562,320 Zm00001d023593 GRMZM2G433162 AY107726 Chr10 11,236,321 11,238,707 Zm00001d031657 GRMZM2G136453 AY107847 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 197,692,665 197,700,005 Zm00001d034048 GRMZM2G021781 AY108136 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 282,391,967 282,393,408 Zm00001d025653 GRMZM2G169648 AY108476 Chr10 125,107,974 125,113,328 Zm00001d034667 GRMZM2G459811 AY109128 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 299,308,121 299,311,210 Zm00001d033214 GRMZM2G023392 AY109506 Chr1 254,400,042 254,402,806 Zm00001d052233 GRMZM2G021605 AY109534 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 184,160,265 184,163,189 Zm00001d047906 GRMZM2G030839 AY109550 Chr9 144,877,403 144,885,689 Zm00001d045478 GRMZM2G069911 AY109570 Chr9 23,695,040 23,695,864 Zm00001d007929 GRMZM2G096814 AY109586 Chr2 243,169,818 243,173,004 Zm00001d007457 GRMZM2G074496 AY109592 Chr2 232,174,927 232,178,984 Zm00001d002095 GRMZM2G070881 AY109603 Chr2 5,873,612 5,878,134 Zm00001d014183 GRMZM2G168506 AY109606 Chr5 35,277,701 35,283,873 GRMZM2G111309 AY109644 Chr7 148,490,575 148,493,173 Zm00001d007038 GRMZM2G008623 AY109645 Chr2 220,640,379 220,648,182 Zm00001d030256 GRMZM2G110198 AY109678 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 117,002,474 117,006,192 Zm00001d008306 GRMZM2G022711 AY109699 Chr8 4,742,217 4,747,002 Zm00001d022621 GRMZM2G386824 AY109703 Chr7 181,284,971 181,293,922 Zm00001d048609 GRMZM2G145725 AY109715 Chr4 1,277,393 1,280,951 Zm00001d006344 GRMZM2G081812 AY109722 Chr2 205,082,198 205,087,995 Zm00001d013086 GRMZM2G130544 AY109733 Chr5 4,528,425 4,530,419 Zm00001d047252 GRMZM2G314769 AY109764 Chr9 124,157,679 124,158,777 Zm00001d047617 GRMZM2G358238 AY109792 Chr9 137,102,247 137,104,733 Zm00001d038972 GRMZM2G464572 AY109797 Chr6 168,004,770 168,021,297 Zm00001d020204 GRMZM2G366020 AY109809 Chr7 98,995,155 99,031,643 Zm00001d026607 GRMZM2G040876 AY109829 Chr10 148,903,998 148,909,780 Zm00001d012772 GRMZM5G876285 AY109853 Chr8 180,571,569 180,572,723 Zm00001d040416 GRMZM2G111014 AY109870 Chr3 42,358,259 42,375,810 Zm00001d038114 GRMZM2G035298 AY109873 Chr6 148,436,043 148,447,618 Zm00001d011981 GRMZM2G312365 AY109883 Chr8 165,739,738 165,746,851 Zm00001d034876 GRMZM2G422649 AY109916 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,508,433 304,511,777 Zm00001d025206 GRMZM2G059965 AY109920 Chr10 109,135,804 109,137,912 Zm00001d028548 GRMZM2G012566 AY109929 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 38,916,237 38,917,464 Zm00001d053620 GRMZM2G078832 AY109933 Chr4 236,807,529 236,818,076 Zm00001d044033 GRMZM2G004183 AY109934 Chr3 217,280,240 217,282,156 Zm00001d017445 GRMZM2G031952 AY109938 Chr5 196,086,107 196,090,434 Zm00001d020374 GRMZM2G450488 AY109968 Chr7 110,023,225 110,030,221 Zm00001d052751 GRMZM2G363038 AY109980 Chr4 199,802,512 199,811,051 Zm00001d014302 GRMZM2G303631 AY109995 Chr5 40,157,090 40,174,134 Zm00001d026397 GRMZM2G037226 AY110016 Chr10 145,157,330 145,158,895 Zm00001d033847 GRMZM2G019267 AY110019 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 275,685,215 275,689,769 Zm00001d010023 GRMZM2G102745 AY110032 Chr8 95,603,408 95,610,248 Zm00001d028575 GRMZM2G141799 AY110052 Chr1 39,563,411 39,569,231 Zm00001d012600 GRMZM2G139223 AY110053 Chr8 177,051,210 177,055,756 Zm00001d042885 GRMZM2G014452 AY110055 Chr3 182,852,880 182,858,783 Zm00001d010443 GRMZM2G131152 AY110056 Chr8 115,380,456 115,387,332 Zm00001d023281 GRMZM5G832378 AY110060 Chr10 2,039,718 2,045,302 Zm00001d047863 GRMZM2G119627 AY110141 Chr9 143,659,557 143,668,321 Zm00001d041186 GRMZM2G017835 AY110151 Chr3 103,858,898 103,868,467 Zm00001d032615 GRMZM5G888696 AY110159 Chr1 232,168,913 232,177,906 Zm00001d034714 GRMZM2G139041 AY110160 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,523,648 300,526,448 Zm00001d025941 GRMZM2G155341 AY110167 Chr10 134,172,888 134,175,566 Zm00001d053015 GRMZM2G155253 AY110170 Chr4 209,127,785 209,129,931 Zm00001d018360 GRMZM2G017923 AY110182 Chr5 219,161,503 219,165,844 Zm00001d032572 GRMZM2G703928 AY110191 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 230,960,883 230,963,337 Zm00001d047583 GRMZM2G131785 AY110217 Chr9 136,358,669 136,371,826 Zm00001d053718 GRMZM2G000964 AY110231 Chr4 239,807,329 239,820,801 Zm00001d024347 GRMZM2G149894 AY110248 Chr10 65,970,347 65,974,404 Zm00001d049113 GRMZM2G070011 AY110253 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 16,448,731 16,450,218 Zm00001d038097 GRMZM2G319109 AY110260 Chr6 147,746,791 147,774,056 Zm00001d003155 GRMZM2G081689 AY110266 Chr2 33,956,257 33,959,338 Zm00001d049857 GRMZM5G821611 AY110290 Chr4 48,657,712 48,662,643 Zm00001d031338 GRMZM2G115981 AY110296 possible overlap with php20654 Chr1 186,729,080 186,739,316 Zm00001d040818 GRMZM2G031568 AY110297 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 67,922,595 67,928,066 Zm00001d051514 GRMZM2G004748 AY110310 Chr4 161,089,336 161,097,086 Zm00001d041788 GRMZM2G163514 AY110352 Chr3 138,093,726 138,100,085 Zm00001d051178 GRMZM2G074436 AY110355 Chr4 147,335,724 147,347,180 Zm00001d032470 GRMZM2G703918 AY110356 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 227,690,751 227,697,800 Zm00001d025342 GRMZM2G128319 AY110365 Chr10 114,817,295 114,821,325 Zm00001d018217 GRMZM2G046407 AY110369 Chr5 216,745,595 216,751,389 Zm00001d021187 GRMZM2G120300 AY110374 Chr7 145,306,214 145,310,459 Zm00001d048236 GRMZM2G433117 AY110382 Chr9 152,956,403 152,965,893 Zm00001d007912 GRMZM2G012326 AY110389 Chr2 242,356,662 242,362,951 Zm00001d028924 GRMZM2G084783 AY110393 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 51,726,622 51,727,890 Zm00001d030626 GRMZM2G110572 AY110396 Chr1 149,605,257 149,616,644 Zm00001d038914 GRMZM5G872417 AY110400 Chr6 166,871,193 166,875,978 Zm00001d040789 GRMZM6G738201 AY110403 Chr3 66,020,807 66,026,623 Zm00001d006133 GRMZM5G860226 AY110410 Chr2 199,509,522 199,514,949 Zm00001d018328 GRMZM2G089466 AY110413 Chr5 218,514,190 218,518,512 Zm00001d034414 GRMZM2G006047 AY110426 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,295,756 292,296,877 Zm00001d037890 AC204292.4_FG006 AY110435 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,204,831 141,207,107 Zm00001d022048 GRMZM5G862931 AY110439 Chr7 168,849,928 168,860,730 Zm00001d009426 GRMZM2G152436 AY110450 Chr8 63,979,970 63,984,569 Zm00001d033552 GRMZM2G068259 AY110452 Chr1 266,967,929 266,975,303 Zm00001d019700 GRMZM2G061562 AY110473 Chr7 51,770,577 51,776,771 Zm00001d034591 GRMZM2G087612 AY110479 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,382,217 297,386,554 Zm00001d025023 GRMZM2G119116 AY110514 Chr10 100,055,458 100,060,317 Zm00001d001807 GRMZM2G348959 AY110535 Chr2 1,263,985 1,266,617 Zm00001d044130 GRMZM2G130358 AY110540 Chr3 220,029,482 220,030,389 Zm00001d037831 GRMZM2G462635 AY110542 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 139,023,844 139,024,401 Zm00001d051194 GRMZM2G374302 AY110562 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 148,148,821 148,150,740 Zm00001d031309 GRMZM6G274034 AY110566 Chr1 185,840,864 185,842,897 Zm00001d044374 GRMZM2G122762 AY110567 Chr3 226,363,228 226,365,057 Zm00001d012395 GRMZM2G149265 AY110569 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 173,526,390 173,530,216 Zm00001d019481 GRMZM2G032699 AY110576 Chr7 36,306,679 36,310,853 Zm00001d012846 GRMZM2G313678 AY110625 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 1,071,426 1,076,029 Zm00001d052525 GRMZM2G439311 AY110631 Chr4 192,080,883 192,084,967 Zm00001d028785 GRMZM2G032047 AY110632 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 46,379,532 46,380,892 Zm00001d028728 GRMZM2G158261 AY110640 v4 Chr1 44,521,225 44,532,226 Zm00001d038174 GRMZM2G141208 AY110873 Chr6 150,536,285 150,541,728 Zm00001d052747 GRMZM2G079471 AY110989 Chr4 199,611,240 199,615,525 Zm00001d017096 GRMZM2G179308 AY111089 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,267,329 185,270,693 Zm00001d043253 GRMZM2G322728 AY111125 Chr3 193,364,496 193,369,646 Zm00001d014039 GRMZM2G158277 AY111142 Chr5 30,288,982 30,292,232 Zm00001d031641 GRMZM2G436319 AY111153 Chr1 197,111,866 197,115,583 Zm00001d024734 GRMZM2G394500 AY111178 Chr10 85,620,431 85,625,034 Zm00001d041217 GRMZM2G018793 AY111333 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 105,966,468 105,968,206 Zm00001d026347 GRMZM2G150901 AY111500 Chr10 143,968,635 143,973,630 Zm00001d042078 GRMZM2G379804 AY111507 Chr3 149,865,745 149,866,748 Zm00001d042107 GRMZM2G106945 AY111541 Chr3 150,853,652 150,855,137 Zm00001d030116 GRMZM2G098331 AY111680 Chr1 107,042,927 107,056,687 Zm00001d032042 GRMZM2G092823 AY111834 Chr1 210,344,733 210,347,136 Zm00001d053298 GRMZM2G125239 AY111962 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 224,897,414 224,899,075 Zm00001d024676 GRMZM2G306105 AY112073 Chr10 83,290,724 83,291,829 Zm00001d002274 GRMZM2G084046 AY112075 Chr2 9,274,911 9,278,376 Zm00001d034702 GRMZM2G120440 AY112175 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,265,094 300,268,087 Zm00001d042050 GRMZM2G138258 AY112215 Chr3 148,701,826 148,704,925 Zm00001d030852 AF546187.1_FG001 az19D1 alpha zein 19kDa D1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF371267 Chr1 163,308,047 163,308,769 Zm00001d030855 AF546187.1_FG007 az19D2 alpha zein 19kDa D2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF371268 Chr1 163,526,102 163,526,827 Zm00001d048809 GRMZM2G044625 az22z3 22kD alpha zein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF371275 Chr4 5,874,886 5,875,686 Zm00001d048812 GRMZM2G346897 az22z4 22kD alpha zein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 606402 Chr4 5,897,751 5,898,554 Zm00001d048806 GRMZM2G088365 az22z5 22kD alpha zein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 541926 Chr4 5,835,517 5,836,317 Zm00001d000236 GRMZM2G172795 b1 colored plant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to GenBank X57276 B73V4_ctg44 29,069 33,275 Zm00001d042989 GRMZM2G397518 ba1 barren stalk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 186,014,629 186,015,264 Zm00001d045427 GRMZM2G072274 baf1 barren stalk fastigiate1 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of B73_V2 to sequence JF309450 Chr9 21,786,350 21,787,375 Zm00001d045728 GRMZM2G145720 bak1 brassinosteroid insensitive1-associated receptor kinase like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Leiboff et al., 2015 Chr9 35,557,580 35,561,282 GRMZM2G008271 bap1a basal layer antifungal protein1a Chr10 80,861,842 80,863,106 Zm00001d024609 GRMZM2G008403 bap1b basal layer antifungal protein1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 80,270,515 80,270,761 Zm00001d049576 GRMZM2G152655 bap2 basal layer antifungal protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 35,888,519 35,889,106 Zm00001d024615 GRMZM2G133382 bap3a basal layer antifungal protein3a Chr10 80,376,562 80,377,211 Zm00001d024617 GRMZM2G133370 bap3b basal layer antifungal protein3b Chr10 80,385,879 80,387,306 Zm00001d021506 GRMZM2G077673 bas1 beta alanine synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 154,416,323 154,419,080 Zm00001d032424 GRMZM2G123884 bass1 bile acid sodium symporter1 Chr1 225,982,558 225,987,682 Zm00001d042867 GRMZM2G007928 bbi1 bowman-birk inhibitor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Johnson et al., 2014 Chr3 182,501,764 182,502,401 Zm00001d031572 GRMZM2G179366 bbr1 BBR/BPC-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 194,778,144 194,780,073 Zm00001d005160 GRMZM2G166230 bbr2 BBR/BPC-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 161,883,752 161,884,455 Zm00001d049800 GRMZM2G164735 bbr3 BBR/BPC-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 45,047,883 45,048,929 Zm00001d045477 GRMZM2G118690 bbr4 BBR/BPC-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 23,631,215 23,636,103 Zm00001d013507 GRMZM2G111475 bcd1072a(hsp70) Chr5 12,959,336 12,964,908 Zm00001d023802 GRMZM2G001500 bcd1072b(hsp70) Chr10 22,238,725 22,244,066 Zm00001d026495 GRMZM2G101179 bcd135b Chr10 147,115,022 147,116,956 Zm00001d032465 GRMZM2G123624 bcd207a Chr1 227,580,069 227,583,574 Zm00001d013860 GRMZM2G002859 bcd207b Chr5 23,136,709 23,154,188 Zm00001d032547 GRMZM5G821828 bcd386a Chr1 230,141,385 230,144,429 Zm00001d038579 GRMZM2G089136 bcd738a(pgk) Chr6 160,393,660 160,396,437 Zm00001d005976 GRMZM2G026065 bcd926b Chr2 194,515,524 194,519,448 Zm00001d031981 GRMZM2G025488 bcd98a Chr1 208,507,191 208,517,368 Zm00001d022488 GRMZM2G307119 bd1 branched silkless1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to cDNA AY178191|27802486 (July 2011); assigned by the Grassius project to ereb151, (Yilmaz et al 2009) Chr7 178,605,958 178,606,905 Zm00001d017614 GRMZM2G160565 bde1 bearded-ear1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 201,741,196 201,748,623 Zm00001d044048 GRMZM2G104226 BE639338 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 217,738,754 217,741,810 Zm00001d042765 GRMZM2G127180 BE639846 Chr3 179,131,107 179,131,481 Zm00001d002129 GRMZM2G305007 BE640649 Chr2 6,412,909 6,421,954 Zm00001d013230 GRMZM2G090432 ben1 bentazon resistance1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 6,781,804 6,783,662 Zm00001d021927 GRMZM2G102514 bes1 brassinosteroid insensitive EMS-suppressor homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) and the Cell Genomics Project Chr7 165,996,679 165,998,338 Zm00001d042231 GRMZM2G091445 betl10 basal endosperm transfer layer10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AI665330 Chr3 156,958,516 156,959,137 Zm00001d041671 GRMZM2G175976 betl3 basal endosperm transfer layer3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 132,868,467 132,868,983 Zm00001d000161 GRMZM2G073290 betl4 basal endosperm transfer layer4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ133531 B73V4_ctg53 334,998 335,553 Zm00001d041822 GRMZM2G087413 betl9 basal endosperm transfer layer9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: LOC100286270 Chr3 139,335,175 139,335,830 Zm00001d048461 GRMZM2G051219 bf1 blue fluorescent1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT034353 Chr9 156,752,400 156,768,303 Zm00001d019312 GRMZM2G172204 bgaf1 beta glucosidase aggregating factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of cDNA AF232008 to B73_v2 AGP Chr7 27,241,848 27,243,532 Zm00001d045107 GRMZM2G067654 bhlh10 bHLH-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 12,899,327 12,901,462 Zm00001d025205 GRMZM2G313756 bhlh100 bHLH-transcription factor 100 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 109,117,980 109,119,599 Zm00001d004007 GRMZM2G173521 bhlh101 bHLH-transcription factor 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 75,054,959 75,056,736 Zm00001d025462 GRMZM2G355469 bhlh102 bHLH-transcription factor 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,451,223 119,452,565 Zm00001d033957 GRMZM2G301089 bhlh103 bHLH-transcription factor 103 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 279,603,784 279,609,495 Zm00001d039764 GRMZM2G088443 bhlh104 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 14,220,288 14,222,436 Zm00001d020790 GRMZM2G082586 bhlh105 bHLH-transcription factor 105 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 132,794,517 132,796,578 Zm00001d020834 GRMZM2G089501 bhlh106 bHLH-transcription factor 106 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 134,251,695 134,259,327 Zm00001d020763 GRMZM2G145146 bhlh107 bHLH-transcription factor 107 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 131,556,875 131,558,045 Zm00001d025141 GRMZM2G119823 bhlh108 bHLH-transcription factor 108 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 106,318,787 106,321,238 Zm00001d021164 GRMZM2G013688 bhlh109 bHLH-transcription factor 109 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 144,534,579 144,535,451 Zm00001d051569 GRMZM2G176289 bhlh11 bHLH-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 162,992,089 162,994,208 Zm00001d027753 GRMZM2G452996 bhlh110 bHLH-transcription factor 110 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,658,925 12,661,298 Zm00001d030232 GRMZM2G150327 bhlh111 bHLH-transcription factor 111 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 114,928,784 114,930,818 Zm00001d031441 GRMZM5G879527 bhlh112 bHLH-transcription factor 112 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 190,232,595 190,235,627 Zm00001d050016 GRMZM2G471635 bhlh113 bHLH-transcription factor 113 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 59,679,062 59,679,787 Zm00001d033407 GRMZM2G095899 bhlh114 bHLH-transcription factor 114 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 262,150,222 262,152,715 Zm00001d031167 GRMZM2G068604 bhlh115 bHLH-transcription factor 115 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 180,398,895 180,403,600 Zm00001d024522 GRMZM2G042895 bhlh116 bHLH-transcription factor 116 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 75,943,680 75,945,921 Zm00001d024783 GRMZM2G062541 bhlh117 bHLH-transcription factor 117 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,873,243 87,875,642 Zm00001d038357 GRMZM2G061906 bhlh118 bHLH-transcription factor 118 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,275,133 155,277,368 Zm00001d016257 GRMZM5G863198 bhlh119 bHLH-transcription factor 119 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 153,889,883 153,891,184 Zm00001d052038 GRMZM2G316758 bhlh12 bHLH-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 177,039,742 177,043,438 Zm00001d012642 GRMZM2G109605 bhlh120 bHLH-transcription factor 120 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 177,705,263 177,706,934 Zm00001d006065 GRMZM2G083504 bhlh121 bHLH-transcription factor 121 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 197,131,272 197,133,841 Zm00001d017724 AC233960.1_FG005 bhlh122 bHLH-transcription factor 122 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 205,288,559 205,291,755 Zm00001d037528 GRMZM2G369629 bhlh123 bHLH-transcription factor 123 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 128,147,394 128,148,828 Zm00001d037749 GRMZM2G132550 bhlh124 bHLH-transcription factor 124 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 136,322,271 136,324,598 Zm00001d045212 GRMZM2G017349 bhlh125 bHLH-transcription factor 125 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 16,243,543 16,247,283 Zm00001d042062 GRMZM2G057413 bhlh126 bHLH-transcription factor 126 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 149,339,655 149,340,629 Zm00001d014814 GRMZM2G128807 bhlh127 bHLH-transcription factor 127 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 64,070,549 64,072,356 Zm00001d054038 GRMZM2G314882 bhlh128 bHLH-transcription factor 128 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 245,455,205 245,458,068 Zm00001d014995 GRMZM5G856837 bhlh129 bHLH-transcription factor 129 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 71,410,131 71,412,758 Zm00001d051509 GRMZM2G091003 bhlh13 bHLH-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,961,176 160,963,697 Zm00001d049294 GRMZM2G033356 bhlh130 bHLH-transcription factor 130 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 24,896,748 24,900,567 Zm00001d048478 GRMZM2G171464 bhlh131 bHLH-transcription factor 131 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 156,990,040 156,991,863 Zm00001d042482 GRMZM2G114873 bhlh132 bHLH-transcription factor 132 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 169,071,573 169,074,850 Zm00001d025727 GRMZM2G437481 bhlh133 bHLH-transcription factor 133 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 127,668,399 127,678,365 Zm00001d026046 GRMZM2G086474 bhlh134 bHLH-transcription factor 134 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 136,883,275 136,886,894 Zm00001d031781 GRMZM2G134735 bhlh135 bHLH-transcription factor 135 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 201,578,936 201,579,691 Zm00001d021019 GRMZM2G144275 bhlh136 bHLH-transcription factor 136 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 140,533,153 140,535,630 Zm00001d033848 GRMZM2G019806 bhlh137 bHLH-transcription factor 137 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 275,704,805 275,707,378 Zm00001d005740 GRMZM2G176141 bhlh138 bHLH-transcription factor 138 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 185,575,930 185,578,477 Zm00001d016095 GRMZM2G064638 bhlh139 bHLH-transcription factor 139 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 144,342,410 144,347,442 Zm00001d011187 GRMZM5G817854 bhlh14 bHLH-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 142,339,407 142,340,699 Zm00001d027419 GRMZM2G475289 bhlh140 bHLH-transcription factor 140 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,891,941 4,894,990 Zm00001d049158 GRMZM2G080168 bhlh141 bHLH-transcription factor 141 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 18,372,576 18,374,628 Zm00001d036807 GRMZM2G074438 bhlh142 bHLH-transcription factor 142 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 101,495,580 101,501,691 Zm00001d047878 GRMZM2G043854 bhlh143 bHLH-transcription factor 143 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 144,091,969 144,094,662 Zm00001d004095 GRMZM2G042893 bhlh144 bHLH-transcription factor 144 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 82,544,089 82,547,190 Zm00001d031717 GRMZM2G472671 bhlh145 bHLH-transcription factor 145 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,251,192 199,251,956 Zm00001d020932 GRMZM2G085467 bhlh146 bHLH-transcription factor 146 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 136,986,209 136,988,745 Zm00001d006733 GRMZM2G383841 bhlh147 bHLH-transcription factor 147 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 215,451,653 215,453,055 Zm00001d002288 GRMZM2G080054 bhlh148 bHLH-transcription factor 148 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,618,257 9,621,258 Zm00001d021988 GRMZM2G057260 bhlh15 bHLH-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 167,558,259 167,560,016 Zm00001d020705 GRMZM2G045431 bhlh150 bHLH-transcription factor 150 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 129,461,161 129,461,889 Zm00001d005964 GRMZM2G137541 bhlh151 bHLH-transcription factor 151 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,057,868 194,060,798 Zm00001d016873 GRMZM5G839518 bhlh152 bHLH-transcription factor 152 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 178,968,180 178,971,530 Zm00001d024781 GRMZM2G036554 bhlh153 bHLH-transcription factor 153 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,545,456 87,546,629 Zm00001d013357 GRMZM2G385543 bhlh154 bHLH-transcription factor 154 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY111937; assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,460,784 9,464,546 Zm00001d052254 GRMZM2G042101 bhlh155 bHLH-transcription factor 155 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,820,400 184,821,661 Zm00001d017908 GRMZM2G317450 bhlh156 bHLH-transcription factor 156 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,974,275 209,978,114 Zm00001d005969 GRMZM2G009478 bhlh157 bHLH-transcription factor 157 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,253,687 194,260,197 Zm00001d030972 GRMZM2G165090 bhlh158 bHLH-transcription factor 158 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 170,184,543 170,189,193 Zm00001d013073 GRMZM2G004356 bhlh159 bHLH-transcription factor 159 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,321,102 4,333,658 Zm00001d027987 GRMZM2G006631 bhlh160 bHLH-transcription factor 160 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 19,433,159 19,435,672 Zm00001d018119 GRMZM2G045883 bhlh161 bHLH-transcription factor 161 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,694,032 214,695,978 Zm00001d024679 GRMZM2G093744 bhlh162 bHLH-transcription factor 162 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 83,443,909 83,447,138 Zm00001d031044 GRMZM5G865967 bhlh163 bHLH-transcription factor 163 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 174,811,257 174,813,790 Zm00001d021701 GRMZM2G058451 bhlh164 bHLH-transcription factor 164 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 160,737,172 160,741,199 Zm00001d049870 GRMZM2G145579 bhlh165 bHLH-transcription factor 165 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 49,701,453 49,703,760 Zm00001d044216 GRMZM2G114444 bhlh166 bHLH-transcription factor 166 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 222,090,042 222,095,901 Zm00001d018416 GRMZM2G030744 bhlh168 bHLH-transcription factor 168 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 220,300,212 220,303,859 Zm00001d005919 GRMZM2G113257 bhlh169 bHLH-transcription factor 169 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 192,761,281 192,762,454 Zm00001d034503 GRMZM2G137358 bhlh17 bHLH-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 294,741,570 294,745,159 Zm00001d031818 GRMZM2G082630 bhlh170 bHLH-transcription factor 170 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 202,899,615 202,900,464 Zm00001d045046 GRMZM2G024530 bhlh171 bHLH-transcription factor 171 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 10,972,295 10,977,439 Zm00001d024679 GRMZM2G017586 bhlh172 bHLH-transcription factor 172 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 83,443,909 83,447,138 Zm00001d031665 GRMZM5G882527 bhlh173 bHLH-transcription factor 173 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 198,078,399 198,080,869 GRMZM2G016039 bhlh174 bHLH-transcription factor 174 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 63,778,666 63,781,023 Zm00001d042263 GRMZM2G173534 bhlh175 bHLH-transcription factor 175 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 157,976,446 157,978,862 Zm00001d013370 GRMZM2G082343 bhlh18 bHLH-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,971,912 9,974,426 Zm00001d008444 GRMZM2G066057 bhlh19 bHLH-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 8,757,504 8,759,356 Zm00001d005841 GRMZM2G414252 bhlh20 bHLH-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 190,556,326 190,557,054 Zm00001d048229 AC233899.1_FG002 bhlh21 bHLH-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,802,586 152,804,818 Zm00001d009715 GRMZM2G162450 bhlh22 bHLH-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 77,390,569 77,394,258 Zm00001d006110 GRMZM2G178182 bhlh23 bHLH-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 198,518,592 198,520,833 Zm00001d053391 GRMZM2G085751 bhlh24 bHLH-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 228,952,679 228,956,244 Zm00001d044242 GRMZM2G081816 bhlh25 bHLH-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 222,847,014 222,848,459 Zm00001d030971 GRMZM2G018472 bhlh26 bHLH-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 170,169,839 170,174,596 Zm00001d033870 GRMZM2G092091 bhlh27 bHLH-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 276,811,932 276,815,539 Zm00001d033413 GRMZM2G155043 bhlh28 bHLH-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 262,398,584 262,399,667 Zm00001d017778 GRMZM2G101350 bhlh29 bHLH-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 206,414,473 206,416,485 Zm00001d028297 GRMZM2G180452 bhlh3 bHLH-transcription factor 3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 29,513,368 29,517,917 Zm00001d018056 GRMZM2G036092 bhlh30 bHLH-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 213,279,676 213,281,098 Zm00001d021172 GRMZM2G435015 bhlh31 bHLH-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 144,963,872 144,965,891 Zm00001d042373 GRMZM2G180406 bhlh32 bHLH-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 163,721,949 163,725,152 Zm00001d005939 GRMZM2G015666 bhlh33 bHLH-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 193,440,250 193,442,203 Zm00001d046096 GRMZM2G045109 bhlh34 bHLH-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 63,010,300 63,011,576 Zm00001d027546 GRMZM2G173372 bhlh35 bHLH-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 8,017,653 8,019,823 Zm00001d052192 GRMZM2G008691 bhlh36 bHLH-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 182,751,796 182,753,978 Zm00001d004007 GRMZM2G107672 bhlh37 bHLH-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 75,054,959 75,056,736 Zm00001d048786 GRMZM2G165188 bhlh38 bHLH-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 5,537,283 5,538,661 Zm00001d018967 GRMZM2G162382 bhlh39 bHLH-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 10,976,782 10,980,428 Zm00001d003964 AC177924.2_FG001 bhlh4 bHLH-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 72,580,663 72,582,175 Zm00001d050394 GRMZM2G526668 bhlh40 bHLH-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 85,655,816 85,658,613 Zm00001d007311 GRMZM2G171818 bhlh41 bHLH-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 227,455,863 227,458,214 Zm00001d032213 GRMZM2G107276 bhlh42 bHLH-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 217,293,260 217,296,215 Zm00001d033267 GRMZM2G165042 bhlh43 bHLH-transcription factor 43 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 256,575,051 256,579,029 Zm00001d009999 GRMZM2G175480 bhlh44 bHLH-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 93,996,343 93,997,092 Zm00001d035155 GRMZM2G481280 bhlh45 bHLH-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 7,226,400 7,226,759 Zm00001d034298 GRMZM2G065374 bhlh47 bHLH-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,721,311 288,725,239 Zm00001d034596 GRMZM2G027068 bhlh48 bHLH-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 297,421,545 297,422,826 Zm00001d027496 GRMZM2G137374 bhlh49 bHLH-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,561,983 6,563,016 Zm00001d037098 GRMZM2G116785 bhlh5 bHLH-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 112,038,762 112,044,232 Zm00001d027497 GRMZM2G137380 bhlh50 bHLH-transcription factor 50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,567,895 6,569,220 Zm00001d053895 GRMZM2G139372 bhlh51 bHLH-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 243,230,105 243,233,634 Zm00001d049721 GRMZM5G812883 bhlh52 bHLH-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 41,503,972 41,504,835 Zm00001d017677 GRMZM2G111146 bhlh53 bHLH-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,020,338 204,023,940 Zm00001d011847 AC193786.3_FG005 bhlh54 bHLH-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 162,652,002 162,656,985 Zm00001d012067 GRMZM2G030762 bhlh55 bHLH-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,566,134 167,569,229 Zm00001d028504 GRMZM2G072376 bhlh56 bHLH-transcription factor 56 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 37,284,320 37,286,411 Zm00001d043706 GRMZM2G159937 bhlh57 bHLH-transcription factor 57 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 207,941,097 207,942,500 Zm00001d041351 AC198518.3_FG005 bhlh58 bHLH-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 113,913,411 113,915,053 Zm00001d007536 GRMZM2G303463 bhlh59 bHLH-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 234,252,951 234,257,011 Zm00001d006022 GRMZM2G417597 bhlh6 bHLH-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,425,336 195,428,897 Zm00001d013130 GRMZM2G016756 bhlh60 bHLH-transcription factor 60 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,228,815 5,231,062 Zm00001d049721 GRMZM5G818776 bhlh61 bHLH-transcription factor 61 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 41,503,972 41,504,835 Zm00001d008853 GRMZM2G333582 bhlh62 bHLH-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 22,586,868 22,590,558 Zm00001d047878 GRMZM2G166642 bhlh63 bHLH-transcription factor 63 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 144,091,969 144,094,662 Zm00001d031260 GRMZM2G175955 bhlh64 bHLH-transcription factor 64 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 184,153,032 184,161,955 Zm00001d040536 GRMZM2G115960 bhlh68 bHLH-transcription factor 68 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,598,914 48,602,327 Zm00001d046759 GRMZM2G378653 bhlh69 bHLH-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 104,670,937 104,675,421 Zm00001d026317 GRMZM2G042920 bhlh7 bHLH-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,490,316 143,494,748 Zm00001d039459 GRMZM2G397755 bhlh70 bHLH-transcription factor 70 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 4,941,036 4,943,303 Zm00001d033412 GRMZM2G120021 bhlh71 bHLH-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 262,342,434 262,343,681 Zm00001d016354 GRMZM2G170559 bhlh72 bHLH-transcription factor 72 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 158,889,636 158,893,874 Zm00001d007768 GRMZM2G008898 bhlh73 bHLH-transcription factor 73 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 239,284,190 239,287,487 Zm00001d027855 GRMZM2G035156 bhlh74 bHLH-transcription factor 74 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,365,601 15,366,843 Zm00001d041350 GRMZM2G395549 bhlh75 bHLH-transcription factor 75 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 113,906,881 113,908,570 Zm00001d040148 GRMZM2G112629 bhlh76 bHLH-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 29,230,164 29,233,762 Zm00001d011212 GRMZM2G463133 bhlh77 bHLH-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 143,076,291 143,081,577 GRMZM2G049686 bhlh78 bHLH-transcription factor 78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 178,465,632 178,471,112 Zm00001d012642 GRMZM2G173862 bhlh79 bHLH-transcription factor 79 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 177,705,263 177,706,934 Zm00001d052728 GRMZM2G038479 bhlh8 bHLH-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 199,184,093 199,184,920 Zm00001d006578 GRMZM2G142932 bhlh80 bHLH-transcription factor 80 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,375,734 211,378,716 Zm00001d031561 GRMZM5G828396 bhlh81 bHLH-transcription factor 81 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 194,339,694 194,342,403 Zm00001d009778 GRMZM2G417164 bhlh82 bHLH-transcription factor 82 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 80,617,513 80,618,172 Zm00001d040152 GRMZM2G169947 bhlh83 bHLH-transcription factor 83 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 29,271,520 29,275,778 Zm00001d027859 GRMZM2G159456 bhlh84 bHLH-transcription factor 84 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,500,226 15,501,662 Zm00001d049721 GRMZM2G354618 bhlh85 bHLH-transcription factor 85 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 41,503,972 41,504,835 Zm00001d020826 GRMZM5G818643 bhlh86 bHLH-transcription factor 86 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,997,692 134,000,698 Zm00001d020490 GRMZM2G027563 bhlh87 bHLH-transcription factor 87 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 118,687,248 118,689,664 Zm00001d000291 GRMZM2G350165 bhlh88 bHLH-transcription factor 88 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg14 71,867 75,016 Zm00001d017804 AC216731.3_FG001 bhlh89 bHLH-transcription factor 89 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,299,284 207,300,818 Zm00001d047999 GRMZM2G407119 bhlh9 bHLH-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 147,624,186 147,626,585 Zm00001d021748 GRMZM2G153454 bhlh90 bHLH-transcription factor 90 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 162,167,457 162,170,381 Zm00001d047017 GRMZM2G049229 bhlh91 bHLH-transcription factor 91 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,421,894 115,424,005 Zm00001d011187 GRMZM2G164341 bhlh92 bHLH-transcription factor 92 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 142,339,407 142,340,699 Zm00001d033729 GRMZM5G899865 bhlh93 bHLH-transcription factor 93 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 272,362,116 272,364,398 Zm00001d044272 GRMZM5G849600 bhlh94 bHLH-transcription factor 94 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 223,519,903 223,525,403 Zm00001d006150 GRMZM2G107560 bhlh95 bHLH-transcription factor 95 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 199,785,894 199,786,769 Zm00001d007382 GRMZM2G172297 bhlh96 bHLH-transcription factor 96 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 230,338,653 230,341,206 Zm00001d048309 AC149829.2_FG004 bhlh97 bHLH-transcription factor 97 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,303,194 154,304,565 Zm00001d046346 GRMZM2G340177 bhlh98 bHLH-transcription factor 98 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 82,254,067 82,256,584 Zm00001d009013 GRMZM2G076636 bhlh99 bHLH-transcription factor 99 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 30,167,000 30,168,835 Zm00001d008749 GRMZM2G130953 bif1 barren inflorescence1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Galli et al., 2015; and assigned by the Grassius project, (Yilmaz et al 2009) to iaa35 Chr8 18,951,758 18,953,833 Zm00001d031068 GRMZM2G171822 bif2 barren inflorescence2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 175,807,851 175,809,432 Zm00001d037691 GRMZM5G864847 bif4 barren inflorescence4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Galli et al, 2015; assigned by the Grassius project, (Yilmaz et al 2009) to iaa27 Chr6 134,088,831 134,092,670 Zm00001d012883 GRMZM2G148937 bige1 big embryo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Suzuki et al., 2015 Chr5 1,584,315 1,587,019 Zm00001d014993 GRMZM2G114793 bip1 Binding protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 71,285,640 71,289,674 Zm00001d054043 GRMZM2G415007 bip2 Binding protein homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT041486 Chr4 245,469,383 245,473,221 GRMZM2G471196 bip3 binding protein3 from Li et al 2012 Chr5 7,364,184 7,366,162 Zm00001d047276 GRMZM2G109326 bk2 brittle stalk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment to cDNA Chr9 125,270,207 125,272,239 Zm00001d015618 GRMZM5G844562 bm1 brown midrib1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 101,493,553 101,498,009 Zm00001d034602 GRMZM2G347056 bm2 brown midrib2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Tang et al., 2013 Chr1 297,605,177 297,611,407 Zm00001d049541 AC196475.3_FG004 bm3 brown midrib3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 33,817,769 33,820,095 Zm00001d048514 GRMZM2G393334 bm4 brown midrib4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al, 2014 Chr9 157,624,300 157,629,807 Zm00001d052343 GRMZM2G032619 bnl10.05 Chr4 187,573,638 187,579,315 Zm00001d026126 GRMZM2G142832 bnl10.13a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 139,063,429 139,066,366 Zm00001d011283 GRMZM2G015735 bnl12.30a Chr8 145,769,052 145,772,245 Zm00001d008299 GRMZM2G041308 bnl13.05a Chr8 4,564,526 4,566,716 Zm00001d007844 GRMZM2G345270 bnl17.14 Chr2 240,821,336 240,824,180 Zm00001d023293 GRMZM2G427014 bnl3.04 Chr10 2,239,888 2,240,337 Zm00001d015292 GRMZM2G482256 bnl4.36 Chr5 82,970,088 82,974,239 Zm00001d046793 GRMZM2G306915 bnl5.04 Chr9 106,298,244 106,301,839 Zm00001d048073 GRMZM2G024718 bnl5.09a Chr9 149,386,295 149,389,525 Zm00001d031316 GRMZM2G113840 bnl5.59a Chr1 185,876,713 185,882,166 Zm00001d006885 GRMZM2G056612 bnl6.20 Chr2 218,537,811 218,543,707 Zm00001d035476 GRMZM2G381086 bnl6.29a Chr6 28,516,750 28,525,006 Zm00001d052334 GRMZM2G138936 bnl7.65 Chr4 187,337,794 187,340,606 Zm00001d039302 GRMZM2G153127 bnl8.15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 1,384,839 1,391,865 Zm00001d047412 GRMZM2G072573 bnl8.17 Chr9 129,389,277 129,397,589 Zm00001d029529 GRMZM2G067371 bnl9.11b(lts) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 74,918,081 74,921,222 Zm00001d028218 GRMZM2G099628 bnlg1007 Chr1 26,887,363 26,899,704 Zm00001d027506 GRMZM2G020548 bnlg1014 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,028,338 7,034,080 Zm00001d032454 GRMZM2G078088 bnlg1025 Chr1 227,220,061 227,226,179 Zm00001d012228 GRMZM2G092817 bnlg1031 Chr8 170,458,719 170,462,003 Zm00001d013746 GRMZM2G152764 bnlg1046 Chr5 19,171,913 19,174,748 Zm00001d031531 bnlg1057 Chr1 192,992,193 192,996,753 Zm00001d025869 GRMZM5G828581 bnlg1074 Chr10 132,099,365 132,104,510 Zm00001d003600 GRMZM2G151021 bnlg108 Chr2 49,392,293 49,394,518 Zm00001d018177 GRMZM2G152703 bnlg1118 Chr5 215,858,946 215,860,240 Zm00001d048575 GRMZM2G168760 bnlg1129 Chr9 159,480,993 159,515,420 Zm00001d039110 GRMZM5G847466 bnlg1136a Chr6 170,150,152 170,150,670 Zm00001d043156 GRMZM2G071705 bnlg1160 Chr3 190,355,964 190,358,793 Zm00001d010719 GRMZM2G375222 bnlg1176a Chr8 125,575,872 125,588,157 Zm00001d006907 GRMZM2G086805 bnlg1316 Chr2 219,180,628 219,186,031 Zm00001d033481 GRMZM2G466385 bnlg1331 Chr1 263,890,476 263,893,516 Zm00001d035462 bnlg1371 Chr6 27,973,065 27,977,307 Zm00001d027881 bnlg1429 Chr1 16,562,282 16,562,617 Zm00001d048614 GRMZM2G008369 bnlg1434 Chr4 1,307,131 1,309,817 Zm00001d040075 GRMZM2G410916 bnlg1452 Chr3 25,850,590 25,853,929 Zm00001d028447 GRMZM2G019567 bnlg1484 Chr1 35,263,025 35,264,614 GRMZM5G833153 bnlg149 Chr1 144,957 145,646 Zm00001d032072 GRMZM2G028726 bnlg1556 Chr1 211,385,712 211,390,492 Zm00001d032555 GRMZM5G821828 bnlg1564 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 230,382,672 230,388,742 Zm00001d018266 GRMZM2G417650 bnlg1597c low confidence Chr5 217,645,186 217,647,573 Zm00001d041718 GRMZM2G081935 bnlg1601 Chr3 134,920,178 134,926,568 Zm00001d031581 GRMZM2G012453 bnlg1615 v4 Chr1 195,388,615 195,402,490 Zm00001d035027 bnlg161b Chr6 2,121,872 2,122,879 Zm00001d040071 GRMZM2G104829 bnlg1638 Chr3 25,807,741 25,810,352 Zm00001d011095 GRMZM2G020544 bnlg1651 Chr8 138,813,684 138,815,295 Zm00001d021839 GRMZM2G081949 bnlg1666 Chr7 164,317,820 164,319,461 Zm00001d026378 GRMZM5G898792 bnlg1677 low confidence Chr10 144,728,996 144,729,422 Zm00001d024678 GRMZM2G093858 bnlg1712 Chr10 83,375,794 83,380,009 Zm00001d039021 GRMZM2G023133 bnlg1740 Chr6 168,832,409 168,834,314 Zm00001d044329 GRMZM2G087769 bnlg1754 Chr3 225,334,349 225,340,679 Zm00001d038993 GRMZM2G157218 bnlg1759a Chr6 168,345,096 168,345,887 Zm00001d020040 GRMZM2G024615 bnlg1792 Chr7 87,960,471 87,966,086 Zm00001d021642 GRMZM2G167591 bnlg1805 Chr7 158,942,190 158,945,366 Zm00001d009997 GRMZM2G022768 bnlg1863 Chr8 93,874,492 93,879,064 Zm00001d013575 GRMZM5G811408 bnlg1879 Chr5 14,591,743 14,592,816 Zm00001d007776 GRMZM2G444543 bnlg1893 Chr2 239,399,262 239,421,613 Zm00001d015282 AC233959.1_FG003 bnlg1902 Chr5 82,612,309 82,612,611 Zm00001d028139 GRMZM2G171073 bnlg1953 Chr1 23,959,615 23,962,773 Zm00001d043294 GRMZM5G851026 bnlg197 Chr3 194,882,159 194,899,827 Zm00001d031345 GRMZM2G017629 bnlg2057 Chr1 186,945,218 186,946,580 Zm00001d009112 GRMZM5G842965 bnlg2082 Chr8 37,142,883 37,144,876 Zm00001d044833 GRMZM2G124276 bnlg2122 Chr9 4,443,557 4,445,778 Zm00001d026287 GRMZM2G019986 bnlg2190 Chr10 142,866,476 142,870,798 Zm00001d036637 GRMZM2G047969 bnlg2191 Chr6 95,864,690 95,867,176 Zm00001d008593 AC196470.3_FG007 bnlg2235 low confidence gene model Chr8 13,779,585 13,780,043 Zm00001d029040 GRMZM2G016480 bnlg2238 Chr1 55,709,486 55,715,009 Zm00001d022103 GRMZM2G037444 bnlg2259 Chr7 170,381,553 170,386,317 Zm00001d021535 GRMZM2G313643 bnlg2271 Chr7 155,278,714 155,283,440 Zm00001d029662 GRMZM2G143703 bnlg2295 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 81,793,904 81,795,995 Zm00001d016278 GRMZM2G121366 bnlg2323 Chr5 155,422,718 155,424,151 Zm00001d013334 GRMZM5G840435 bnlg565 Chr5 8,847,570 8,853,272 Zm00001d053831 GRMZM2G101920 bnlg589 Chr4 241,982,040 241,984,774 Zm00001d017713 GRMZM2G076313 bnlg609 Chr5 205,042,879 205,045,991 Zm00001d016070 GRMZM2G063162 bnl(pho80) phosphate regulatory homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T14681 Chr5 142,715,769 142,723,741 Zm00001d019513 GRMZM5G805008 bpd1 BTB/POZ domain1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2014 Chr7 38,992,333 38,993,388 Zm00001d031871 GRMZM2G315375 br2 brachytic2 Gene model association inferred from similarity with B73 RefGen_v3 gene models by AY366085 sequence Chr1 204,748,411 204,755,635 Zm00001d053617 GRMZM2G107322 brc1 brassinosteroid catabolism1 Chr4 236,577,171 236,580,231 Zm00001d046422 GRMZM5G852663 brc2 brassinosteroid catabolism2 Chr9 88,938,385 88,941,121 Zm00001d033180 GRMZM2G103773 brd1 brassinosteroid-deficient dwarf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Makervitch et al 2012 Chr1 253,162,491 253,166,753 Zm00001d011721 GRMZM2G048294 bri1a brassinosteroid insensitive1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Kir et al., 2015 Chr8 159,899,428 159,902,796 GRMZM2G449830 bri1b brassinosteroid insensitive1b Kir et al., 2015 Chr5 60,684,674 60,686,106 Zm00001d018535 GRMZM5G842058 brk1 brick1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from maize Cell Genomics Project (Oct 2013) Chr5 222,621,124 222,631,121 Zm00001d023262 GRMZM5G886363 brk3 brick3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Facette, MR et al. 2015 Chr10 1,565,392 1,599,381 Zm00001d019983 GRMZM2G092604 brl1 bri1-like receptor kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Kir et al., 2015 Chr7 81,911,649 81,915,296 Zm00001d000055 GRMZM2G002515 brl2 bri1-like receptor kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Kir et al., 2015 B73V4_ctg10 94,253 97,609 Zm00001d050132 GRMZM2G438007 brl3 bri1-like receptor kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Kir et al., 2015 Chr4 68,202,250 68,205,876 Zm00001d014977 GRMZM2G163849 brm1 brahma1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen et al., 2015 Chr5 70,822,621 70,833,837 Zm00001d028325 GRMZM2G065635 brs1 brassinosteroid synthesis1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to cDNA Chr1 30,793,737 30,799,897 Zm00001d030786 GRMZM2G062788 bsd2 bundle sheath defective2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 159,716,363 159,727,649 Zm00001d007479 GRMZM2G170161 bsdtf1 BSD-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 232,670,519 232,674,294 Zm00001d026518 GRMZM2G368898 bsdtf10 BSD-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,474,669 147,476,975 Zm00001d040393 GRMZM2G013378 bsdtf2 BSD-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 41,209,163 41,210,950 Zm00001d049563 GRMZM5G870572 bsdtf3 BSD-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 35,300,551 35,308,212 Zm00001d051702 GRMZM2G127548 bsdtf4 BSD-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 167,217,231 167,220,804 Zm00001d015822 GRMZM2G451806 bsdtf5 BSD-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 123,923,364 123,931,531 Zm00001d017905 GRMZM2G145594 bsdtf6 BSD-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,876,443 209,879,538 Zm00001d022353 GRMZM2G111672 bsdtf7 BSD-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 176,066,383 176,067,741 Zm00001d012665 GRMZM2G027535 bsdtf8 BSD-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 178,290,064 178,293,854 Zm00001d045155 GRMZM2G167207 bsdtf9 BSD-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 14,559,471 14,564,663 Zm00001d011813 GRMZM2G168552 bss1 bundle sheath strands specific1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Virlouvet et al., 2011 Chr8 161,930,926 161,931,866 Zm00001d015746 GRMZM2G144081 bt1 brittle endosperm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 115,748,852 115,750,963 Zm00001d050032 GRMZM2G068506 bt2 brittle endosperm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 61,315,575 61,321,350 Zm00001d027318 GRMZM2G041881 btf3 BTF3 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,827,035 2,829,836 Zm00001d021588 GRMZM2G105750 bub1 budding inhibited by benzimidazoles homolog1 from XP_008650955; Su et al., 2017 Chr7 157,319,980 157,335,608 Zm00001d045389 GRMZM5G899300 bub3 budding unhibited by benzimidazoles homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NP_001149777; Su et al., 2017 Chr9 20,391,918 20,402,487 Zm00001d012791 GRMZM2G446170 burp1 BURP domain-containing protein-RD22-like1 Chr8 181,042,885 181,044,792 Zm00001d043538 GRMZM5G800586 burp2 BURP domain-containing protein-RD22-like2 Chr3 203,302,960 203,305,033 Zm00001d018837 GRMZM2G032145 burp3 BURP domain-containing protein-RD22-like3 Chr7 6,925,327 6,929,344 Zm00001d020875 GRMZM2G078779 burp4 BURP domain-containing protein-RD22-like4 Chr7 135,220,239 135,221,598 Zm00001d030997 GRMZM2G108422 burp5 BURP domain-containing protein-RD22-like5 Chr1 172,610,221 172,611,532 Zm00001d031312 GRMZM2G113229 burp6 BURP domain-containing protein-RD22-like6 Chr1 185,850,815 185,852,753 Zm00001d020122 GRMZM2G146665 burp7 BURP domain-containing protein-RD22-like7 Chr7 94,287,204 94,289,243 Zm00001d050241 GRMZM2G147756 burp8 BURP domain-containing protein-RD22-like8 Chr4 75,536,877 75,538,808 Zm00001d018830 GRMZM2G406170 burp9 BURP domain-containing protein-RD22-like9 Chr7 6,731,455 6,733,751 Zm00001d016486 GRMZM2G366698 bv1 brevis plant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Avila et al, 2016 Chr5 164,499,366 164,511,896 Zm00001d048709 GRMZM2G085381 bx1 benzoxazinless1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,833,330 3,835,353 Zm00001d029359 GRMZM2G311036 bx10 benzoxazinone synthesis10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Meihls et al Chr1 67,311,965 67,314,047 Zm00001d029356 GRMZM2G336824 bx11 benzoxazinone synthesis11 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Meihls et al 2013 Chr1 67,228,813 67,231,314 Zm00001d029353 GRMZM2G023325 bx12 benzoxazinone synthesis12 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Meihls et al 2013 Chr1 67,108,827 67,116,860 Zm00001d007718 AC148152.3_FG005 bx13 benzoxazinone synthesis13 Handrick et al., 2016 Chr2 238,143,557 238,145,188 Zm00001d004921 GRMZM2G127418 bx14 benzoxazinone synthesis14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Handrick et al., 2016 Chr2 148,710,174 148,711,618 Zm00001d048710 GRMZM2G085661 bx2 benzoxazinone synthesis2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 3,837,797 3,839,930 Zm00001d048702 GRMZM2G167549 bx3 benzoxazinone synthesis3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Butron et al 2010 Chr4 3,574,390 3,576,530 Zm00001d048703 GRMZM2G172491 bx4 benzoxazinone synthesis4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Butron et al 2010 Chr4 3,614,699 3,616,705 Zm00001d048705 GRMZM2G063756 bx5 benzoxazinone synthesis5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Butron et al 2010 Chr4 3,672,327 3,674,403 Zm00001d048634 GRMZM6G617209 bx6 benzoxazinone synthesis6 from: EU960746; in v3 Chr4 1,846,585 1,848,071 Zm00001d049179 GRMZM2G441753 bx7 benzoxazinone synthesis7 alignment to cDNA EU192149; note there is gap in the BAC sequence at this region so gene model is not complete Chr4 19,409,404 19,410,924 Zm00001d048707 GRMZM2G085054 bx8 benzoxazinone synthesis8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of cDNA EU968182.1 to B73 v2 genome (Oct 2011 M Schaeffer) Chr4 3,787,419 3,789,065 Zm00001d031209 GRMZM2G161335 bx9 benzoxazinone synthesis9 Gene model association inferred from similarity with B73 RefGen_v3 gene models From alignment of AY107409 Chr1 182,293,107 182,294,953 Zm00001d045055 GRMZM2G165390 bz1 bronze1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 11,218,973 11,220,493 Zm00001d032969 GRMZM2G016241 bz2 bronze2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 245,012,635 245,014,564 Zm00001d043992 GRMZM2G117851 bzip1 bZIP transcription factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY685208 Chr3 215,850,507 215,866,477 Zm00001d023507 GRMZM2G136266 bzip10 bZIP-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 7,855,627 7,859,481 Zm00001d044940 GRMZM2G033413 bzip100 bZIP-transcription factor 100 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 7,823,935 7,834,292 Zm00001d038311 GRMZM2G129247 bzip101 bZIP-transcription factor 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,175,962 154,178,461 Zm00001d043117 GRMZM2G159134 bzip102 bZIP-transcription factor 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 189,693,131 189,698,040 Zm00001d016732 GRMZM2G092609 bzip103 bZIP-transcription factor 103 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 174,493,368 174,497,696 Zm00001d015421 GRMZM2G098904 bzip104 bZIP-transcription factor 104 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 89,376,383 89,379,344 Zm00001d047587 GRMZM2G056099 bzip105 bZIP-transcription factor 105 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 136,381,079 136,391,778 Zm00001d036400 GRMZM2G055413 bzip106 bZIP-transcription factor 106 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 86,826,580 86,827,383 Zm00001d024160 GRMZM2G094352 bzip107 bZIP-transcription factor 107 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 51,315,314 51,327,171 Zm00001d010667 GRMZM2G033230 bzip108 bZIP-transcription factor 108 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 123,641,909 123,643,672 Zm00001d023424 GRMZM2G366264 bzip109 bZIP-transcription factor 109 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,180,381 5,183,180 Zm00001d053162 GRMZM2G079365 bzip110 bZIP-transcription factor 110 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 217,387,342 217,403,410 Zm00001d030995 GRMZM2G073427 bzip111 bZIP-transcription factor 111 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 172,452,608 172,457,478 Zm00001d026398 GRMZM2G445575 bzip113 bZIP-transcription factor 113 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,211,405 145,218,613 Zm00001d027461 GRMZM2G428184 bzip114 bZIP-transcription factor 114 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,816,871 5,819,671 Zm00001d028372 GRMZM2G157177 bzip115 bZIP-transcription factor 115 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 32,433,751 32,442,505 Zm00001d010168 GRMZM2G132868 bzip116 bZIP-transcription factor 116 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,731,520 102,732,709 Zm00001d039383 AC233853.1_FG002 bzip117 bZIP-transcription factor 117 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 3,077,422 3,079,293 Zm00001d039206 GRMZM2G164848 bzip118 bZIP-transcription factor 118 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 172,509,105 172,510,659 Zm00001d049135 GRMZM2G120167 bzip119 bZIP-transcription factor 119 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,281,947 17,287,115 Zm00001d053442 GRMZM2G052102 bzip120 bZIP-transcription factor 120 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 231,582,689 231,584,787 Zm00001d003180 GRMZM2G112483 bzip121 bZIP-transcription factor 121 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 34,882,973 34,887,627 Zm00001d008734 GRMZM2G171912 bzip122 bZIP-transcription factor 122 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 18,247,920 18,249,030 Zm00001d005884 GRMZM2G002075 bzip123 bZIP-transcription factor 123 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 191,754,966 191,757,817 Zm00001d047519 GRMZM2G151295 bzip124 bZIP-transcription factor 124 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 133,377,512 133,383,097 Zm00001d037170 GRMZM2G008166 bzip125 bZIP-transcription factor 125 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 114,741,698 114,745,764 Zm00001d031272 AC186606.4_FG003 bzip126 bZIP-transcription factor 126 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 184,633,692 184,634,300 Zm00001d031723 GRMZM2G175280 bzip127 bZIP-transcription factor 127 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,502,427 199,506,388 Zm00001d017911 GRMZM2G020799 bzip13 bZIP-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,005,007 210,005,537 Zm00001d015118 GRMZM2G153144 bzip14 bZIP-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 76,331,375 76,334,353 Zm00001d036392 GRMZM2G402862 bzip15 bZIP-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 86,656,485 86,658,128 Zm00001d052807 GRMZM2G144480 bzip16 bZIP-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 201,501,262 201,501,687 GRMZM2G444748 bzip160 bZIP-transcription factor 60 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 74,948,230 74,950,097 Zm00001d046937 GRMZM2G103647 bzip17 bZIP-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 111,794,987 111,797,460 Zm00001d043908 GRMZM5G848942 bzip19 bZIP-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 213,533,138 213,534,279 Zm00001d012719 GRMZM2G170079 bzip20 bZIP-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 179,164,455 179,168,169 Zm00001d044546 GRMZM2G368491 bzip21 bZIP-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 231,393,431 231,393,859 Zm00001d021191 GRMZM2G043600 bzip22 bZIP-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 145,445,635 145,448,907 Zm00001d004857 GRMZM5G821024 bzip23 bZIP-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 145,114,887 145,119,368 Zm00001d028879 GRMZM2G038015 bzip24 bZIP-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 49,496,883 49,497,413 Zm00001d010658 GRMZM2G080731 bzip25 bZIP-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 123,182,660 123,185,472 Zm00001d034199 GRMZM2G177046 bzip26 bZIP-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 286,425,311 286,425,868 Zm00001d002143 GRMZM2G131961 bzip27 bZIP-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 6,636,877 6,642,835 Zm00001d015846 GRMZM2G029979 bzip28 bZIP-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 125,802,400 125,805,852 Zm00001d034571 GRMZM2G138340 bzip29 bZIP-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 296,596,877 296,600,683 Zm00001d041142 GRMZM2G074373 bzip3 bZIP-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 100,232,730 100,240,533 Zm00001d031194 GRMZM2G370026 bzip31 bZIP-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 181,836,162 181,836,725 Zm00001d024285 GRMZM5G884349 bzip32 bZIP-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 61,712,124 61,716,615 Zm00001d038189 GRMZM2G045236 bzip34 bZIP-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,913,450 150,943,935 Zm00001d046664 GRMZM2G407631 bzip35 bZIP-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 101,174,444 101,175,007 Zm00001d015664 GRMZM2G080111 bzip36 bZIP-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 104,209,488 104,209,994 Zm00001d024041 GRMZM2G088140 bzip37 bZIP-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 39,073,197 39,078,744 Zm00001d018571 GRMZM2G073892 bzip38 bZIP-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 223,499,069 223,500,207 Zm00001d018178 GRMZM2G479760 bzip4 bZIP-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 215,861,734 215,871,643 Zm00001d005578 AC203957.3_FG004 bzip40 bZIP-transcription factor 40 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 179,315,956 179,317,710 Zm00001d034447 GRMZM2G019446 bzip41 bZIP-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,289,851 293,293,079 Zm00001d040500 GRMZM2G160136 bzip42 bZIP-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 47,004,098 47,005,326 Zm00001d052725 GRMZM2G149150 bzip43 bZIP-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 199,034,864 199,038,928 Zm00001d012273 GRMZM2G438293 bzip44 bZIP-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,684,370 171,696,504 Zm00001d030577 GRMZM2G093020 bzip45 bZIP-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 145,543,611 145,545,618 Zm00001d006157 GRMZM2G037910 bzip46 bZIP-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 200,049,082 200,051,424 Zm00001d021189 AC200057.4_FG007 bzip47 bZIP-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 145,424,990 145,430,280 Zm00001d041604 GRMZM2G160902 bzip48 bZIP-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 129,456,939 129,457,397 Zm00001d031790 GRMZM2G478417 bzip49 bZIP-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 201,947,175 201,952,222 Zm00001d025638 GRMZM2G358701 bzip5 bZIP-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 124,744,076 124,745,217 Zm00001d053703 GRMZM2G336766 bzip50 bZIP-transcription factor 50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,596,872 239,597,402 Zm00001d018729 GRMZM2G438652 bzip51 bZIP-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 3,195,528 3,196,172 Zm00001d028936 GRMZM2G174284 bzip52 bZIP-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 52,167,612 52,173,614 Zm00001d043420 GRMZM2G027976 bzip53 bZIP-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 199,110,559 199,113,757 Zm00001d022542 GRMZM2G361847 bzip54 bZIP-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 179,748,248 179,754,088 Zm00001d013172 GRMZM2G386273 bzip55 bZIP-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,811,446 5,811,943 Zm00001d022442 GRMZM2G149040 bzip58 bZIP-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 177,744,976 177,750,636 Zm00001d037360 GRMZM2G396632 bzip59 bZIP-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 122,835,847 122,836,443 Zm00001d039658 GRMZM2G039828 bzip6 bZIP-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 10,933,798 10,935,205 Zm00001d046718 GRMZM2G025812 bzip60 bZIP transcription factor60 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to cDNA AY104864 Chr9 103,268,035 103,270,103 Zm00001d015743 GRMZM2G137046 bzip61 bZIP-transcription factor 61 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 115,451,296 115,456,402 Zm00001d031697 GRMZM2G332294 bzip62 bZIP-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 198,774,832 198,777,673 GRMZM2G011119 bzip63 bZIP-transcription factor 63 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 189,210,328 189,213,307 Zm00001d048455 GRMZM2G473274 bzip64 bZIP-transcription factor 64 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 156,679,754 156,681,460 Zm00001d006127 GRMZM2G180847 bzip65 bZIP-transcription factor 65 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 199,265,525 199,270,738 Zm00001d014710 GRMZM2G342424 bzip66 bZIP-transcription factor 66 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 60,106,171 60,107,716 Zm00001d023443 GRMZM2G365754 bzip67 bZIP-transcription factor 67 from alignment to 103640770 in v4 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,649,486 5,650,525 Zm00001d050018 GRMZM2G157722 bzip68 bZIP-transcription factor 68 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 60,011,623 60,016,737 Zm00001d017260 GRMZM2G111504 bzip69 bZIP-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 190,784,592 190,784,804 Zm00001d020938 GRMZM2G006578 bzip7 bZIP-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 137,232,926 137,243,079 Zm00001d046751 GRMZM2G060290 bzip70 bZIP-transcription factor 70 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 104,375,107 104,380,709 Zm00001d053967 GRMZM2G019106 bzip71 bZIP-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 244,414,417 244,418,397 Zm00001d008225 GRMZM2G030280 bzip72 bZIP-transcription factor 72 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,785,019 1,794,777 Zm00001d038574 GRMZM2G175870 bzip73 bZIP-transcription factor 73 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,173,085 160,179,557 Zm00001d020823 GRMZM2G358796 bzip74 bZIP-transcription factor 74 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,939,918 133,940,505 Zm00001d012296 GRMZM2G168079 bzip75 bZIP-transcription factor 75 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 172,051,538 172,056,127 Zm00001d036736 GRMZM2G134863 bzip76 bZIP-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 99,406,292 99,413,471 Zm00001d047644 GRMZM2G066734 bzip77 bZIP-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 137,917,348 137,917,737 Zm00001d029711 GRMZM2G353553 bzip78 bZIP-transcription factor 78 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 83,544,940 83,547,374 Zm00001d052543 GRMZM2G030877 bzip79 bZIP-transcription factor 79 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 192,657,367 192,664,592 Zm00001d041920 GRMZM2G146020 bzip8 bZIP-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 143,644,925 143,649,063 Zm00001d046402 GRMZM2G140355 bzip80 bZIP-transcription factor 80 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 87,461,762 87,465,060 Zm00001d052717 AC190609.3_FG001 bzip81 bZIP-transcription factor 81 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 198,573,893 198,576,750 Zm00001d005962 GRMZM2G137532 bzip82 bZIP-transcription factor 82 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,020,190 194,020,684 Zm00001d014795 GRMZM2G000171 bzip83 bZIP-transcription factor 83 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 63,482,860 63,486,476 Zm00001d053988 GRMZM2G361611 bzip84 bZIP-transcription factor 84 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 244,691,517 244,692,145 Zm00001d006027 GRMZM2G125934 bzip85 bZIP-transcription factor 85 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,561,468 195,570,994 Zm00001d005244 GRMZM2G171370 bzip86 bZIP-transcription factor 86 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 165,521,128 165,527,158 Zm00001d038296 GRMZM2G000842 bzip87 bZIP-transcription factor 87 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,617,288 153,623,323 Zm00001d025589 GRMZM2G425920 bzip88 bZIP-transcription factor 88 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 123,303,091 123,307,977 Zm00001d016154 GRMZM2G158313 bzip89 bZIP-transcription factor 89 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 147,356,832 147,358,697 Zm00001d020025 GRMZM2G092137 bzip9 bZIP-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 86,720,505 86,722,227 Zm00001d007042 GRMZM2G060109 bzip91 bZIP-transcription factor 91 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 220,735,632 220,738,913 Zm00001d022550 GRMZM2G077124 bzip92 bZIP-transcription factor 92 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 179,802,619 179,805,281 Zm00001d046564 GRMZM2G050912 bzip93 bZIP-transcription factor 93 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 96,085,990 96,091,648 Zm00001d042721 GRMZM5G858197 bzip95 bZIP-transcription factor 95 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,186,600 178,189,773 Zm00001d010638 GRMZM2G161009 bzip96 bZIP-transcription factor 96 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,764,919 122,767,912 Zm00001d051739 GRMZM2G122846 bzip97 bZIP-transcription factor 97 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 168,580,085 168,580,537 Zm00001d029064 GRMZM2G062391 bzip98 bZIP-transcription factor 98 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 56,911,430 56,916,805 Zm00001d046305 GRMZM5G812774 bzr1 BZR-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 79,548,451 79,551,855 Zm00001d039439 GRMZM6G287292 bzr2 BZR-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Manoli et al., 2017; merged into Zm00001d039439 in v4 Chr3 4,457,841 4,460,509 Zm00001d053543 GRMZM2G307241 bzr3 BZR-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 233,528,735 233,529,987 Zm00001d019756 GRMZM2G446515 bzr4 BZR-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 56,698,394 56,703,572 Zm00001d053975 GRMZM2G069486 bzr5 BZR-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 244,506,167 244,518,266 Zm00001d039635 GRMZM5G868061 bzr6 BZR-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,812,399 9,813,375 Zm00001d006677 AC194970.5_FG002 bzr7 BZR-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 214,086,849 214,088,343 Zm00001d016231 GRMZM2G369018 bzr8 BZR-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 151,405,284 151,407,104 Zm00001d027587 GRMZM2G152172 bzr9 BZR-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 8,496,660 8,498,315 Zm00001d044975 GRMZM2G005066 c1 colored aleurone1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 8,983,448 8,984,721 Zm00001d052673 GRMZM2G422750 c2 colorless2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 196,893,203 196,896,534 Zm00001d053841 GRMZM2G119640 c3h1 C3H-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 242,143,111 242,149,682 Zm00001d004541 GRMZM2G147623 c3h10 C3H-transcription factor 310 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 117,112,005 117,121,714 Zm00001d049223 GRMZM2G146514 c3h11 C3H-transcription factor 311 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 21,429,671 21,450,419 Zm00001d040301 GRMZM2G069009 c3h12 C3H-transcription factor 312 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 36,557,966 36,563,190 Zm00001d042363 GRMZM2G087032 c3h13 C3H-transcription factor 313 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 163,299,606 163,305,479 Zm00001d026587 GRMZM2G150262 c3h14 C3H-transcription factor 314 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,406,795 148,411,190 Zm00001d006619 GRMZM2G099622 c3h15 C3H-transcription factor 315 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 212,747,709 212,749,721 Zm00001d001933 GRMZM2G071034 c3h16 C3H-transcription factor 316 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,097,287 3,101,632 Zm00001d033610 GRMZM2G180979 c3h17 C3H-transcription factor 317 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 268,575,554 268,577,794 Zm00001d046740 GRMZM2G151689 c3h18 C3H-transcription factor 318 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 103,969,348 103,972,229 Zm00001d004651 GRMZM2G100794 c3h19 C3H-transcription factor 319 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 126,256,187 126,280,335 Zm00001d044260 GRMZM2G306357 c3h2 C3H-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 223,156,502 223,169,831 Zm00001d022427 GRMZM2G311665 c3h20 C3H-transcription factor 320 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 177,449,434 177,453,594 Zm00001d044074 GRMZM2G157927 c3h21 C3H-transcription factor 321 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 218,387,500 218,388,660 Zm00001d044481 GRMZM2G422205 c3h22 C3H-transcription factor 322 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 229,389,338 229,411,816 Zm00001d008323 GRMZM2G475017 c3h23 C3H-transcription factor 323 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 5,210,822 5,217,086 Zm00001d024703 GRMZM2G005126 c3h24 C3H-transcription factor 324 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 84,135,184 84,142,738 Zm00001d036796 GRMZM2G110402 c3h26 C3H-transcription factor 326 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 101,178,916 101,181,950 Zm00001d013497 GRMZM5G845366 c3h27 C3H-transcription factor 327 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 12,787,522 12,789,765 Zm00001d008322 GRMZM2G036837 c3h28 C3H-transcription factor 328 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 5,172,219 5,181,074 Zm00001d014705 GRMZM2G089050 c3h29 C3H-transcription factor 329 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 59,972,600 59,977,078 Zm00001d039101 GRMZM2G149347 c3h3 C3H-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 170,023,704 170,025,807 Zm00001d034710 GRMZM2G123876 c3h30 C3H-transcription factor 330 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 300,423,240 300,426,736 Zm00001d024534 GRMZM2G305582 c3h31 C3H-transcription factor 331 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 76,841,341 76,845,268 Zm00001d021831 GRMZM5G842019 c3h32 C3H-transcription factor32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 164,100,462 164,102,432 Zm00001d021831 AC233871.1_FG008 c3h33 C3H-transcription factor 333 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 164,100,462 164,102,432 Zm00001d017595 GRMZM2G037200 c3h34 C3H-transcription factor 334 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,207,642 201,214,016 Zm00001d040302 GRMZM2G086994 c3h35 C3H-transcription factor 335 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 36,669,164 36,675,206 Zm00001d009570 GRMZM2G031827 c3h36 C3H-transcription factor 336 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 71,232,543 71,233,457 Zm00001d008735 GRMZM2G171942 c3h37 C3H-transcription factor 337 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 18,255,737 18,257,026 Zm00001d053682 GRMZM2G056920 c3h38 C3H-transcription factor 338 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,942,996 238,945,802 Zm00001d037769 GRMZM5G801627 c3h39 C3H-transcription factor 339 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 136,802,596 136,803,895 Zm00001d007784 GRMZM2G025014 c3h4 C3H-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 239,549,775 239,550,674 Zm00001d020954 GRMZM2G177229 c3h40 C3H-transcription factor 340 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 137,626,105 137,626,968 Zm00001d028828 GRMZM2G427438 c3h41 C3H-transcription factor 341 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 47,876,114 47,877,953 Zm00001d008356 GRMZM2G024655 c3h42 C3H-transcription factor 342 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 6,168,205 6,172,172 Zm00001d053397 GRMZM2G164359 c3h43 C3H-transcription factor 343 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 229,276,261 229,284,755 Zm00001d041639 GRMZM2G162119 c3h44 C3H-transcription factor 344 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 130,914,687 130,915,205 Zm00001d029010 GRMZM2G003424 c3h45 C3H-transcription factor 345 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 54,753,176 54,756,798 Zm00001d011355 GRMZM2G039889 c3h46 C3H-transcription factor 346 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 147,966,473 147,976,741 Zm00001d008812 GRMZM2G173124 c3h47 C3H-transcription factor 347 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 21,359,783 21,360,919 Zm00001d044667 GRMZM2G044004 c3h48 C3H-transcription factor 348 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 234,427,651 234,431,985 Zm00001d012049 GRMZM2G107491 c3h49 C3H-transcription factor 349 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,234,279 167,239,072 Zm00001d045887 GRMZM2G395842 c3h5 C3H-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 45,732,153 45,749,402 Zm00001d052385 GRMZM2G346113 c3h50 C3H-transcription factor 350 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 188,826,682 188,830,788 Zm00001d033553 GRMZM2G068476 c3h51 C3H-transcription factor 351 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 266,977,364 266,985,110 Zm00001d026543 GRMZM2G124476 c3h52 C3H-transcription factor 352 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,949,565 147,957,914 Zm00001d039014 GRMZM2G020928 c3h53 C3H-transcription factor 353 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,713,527 168,714,450 Zm00001d023636 GRMZM2G006493 c3h54 C3H-transcription factor 354 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 13,145,933 13,165,086 Zm00001d047539 GRMZM2G086614 c3h6 C3H-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 134,366,863 134,371,934 Zm00001d010956 GRMZM2G117007 c3h7 C3H-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 134,965,004 134,966,797 Zm00001d049516 GRMZM2G315515 c3h8 C3H-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 32,965,071 32,965,902 Zm00001d011470 GRMZM5G830949 c3h9 C3H-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 151,370,919 151,372,642 Zm00001d013501 GRMZM2G026157 ca2p1 CCAAT-HAP2-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 12,924,588 12,927,450 Zm00001d013676 GRMZM2G165488 ca2p10 CCAAT-HAP2-transcription factor 210 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 17,050,121 17,054,266 Zm00001d041491 GRMZM2G104396 ca2p12 CCAAT-HAP2-transcription factor 212 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 123,760,201 123,767,258 Zm00001d018255 GRMZM5G857944 ca2p13 CCAAT-HAP2-transcription factor 213 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 217,462,041 217,466,991 Zm00001d007882 GRMZM2G096016 ca2p14 CCAAT-HAP2-transcription factor 214 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 241,672,970 241,675,483 Zm00001d022109 GRMZM2G038303 ca2p15 CCAAT-HAP2-transcription factor 215 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 170,559,870 170,564,261 Zm00001d033602 GRMZM2G091964 ca2p16 CCAAT-HAP2-transcription factor 216 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 268,308,237 268,315,814 GRMZM2G582893 ca2p2 CCAAT-HAP2-transcription factor 22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 22,308,191 22,311,425 Zm00001d029489 GRMZM2G037630 ca2p3 CCAAT-HAP2-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 72,880,539 72,887,083 Zm00001d006835 GRMZM2G040349 ca2p4 CCAAT-HAP2-transcription factor4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 217,595,882 217,600,202 Zm00001d031092 GRMZM5G853836 ca2p5 CCAAT-HAP2-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 176,869,959 176,875,893 Zm00001d033215 GRMZM5G829103 ca2p6 CCAAT-HAP2-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,416,539 254,420,845 Zm00001d026305 GRMZM2G126957 ca2p7 CCAAT-HAP2-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,264,094 143,272,292 Zm00001d022109 GRMZM2G361842 ca2p8 CCAAT-HAP2-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 170,559,870 170,564,261 Zm00001d033773 GRMZM5G865626 ca2p9 CCAAT-HAP2-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 273,183,116 273,187,001 Zm00001d042968 GRMZM2G303465 ca3p1 CCAAT-HAP3-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 185,334,729 185,336,842 Zm00001d001775 GRMZM2G480621 ca3p2 CCAAT-HAP3-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 546,551 547,601 Zm00001d042197 GRMZM2G169884 ca3p3 CCAAT-HAP3-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 155,849,692 155,850,192 Zm00001d022099 GRMZM2G384528 ca3p4 CCAAT-HAP3-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 170,256,890 170,257,680 Zm00001d026648 GRMZM2G074773 ca5p1 CCAAT-HAP5-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 149,366,118 149,366,501 Zm00001d038557 GRMZM2G440949 ca5p10 CCAAT-HAP5-transcription factor 510 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,799,343 159,805,085 Zm00001d028432 GRMZM2G089812 ca5p11 CCAAT-HAP5-transcription factor 511 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 34,899,450 34,900,187 Zm00001d005993 GRMZM2G022162 ca5p12 CCAAT-HAP5-transcription factor 512 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,914,879 194,915,718 Zm00001d031310 GRMZM2G113127 ca5p13 CCAAT-HAP5-transcription factor 513 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 185,845,156 185,845,758 Zm00001d052838 GRMZM2G174776 ca5p14 CCAAT-HAP5-transcription factor 514 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 202,307,193 202,307,801 Zm00001d039581 GRMZM2G099461 ca5p15 CCAAT-HAP5-transcription factor 515 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 8,291,514 8,292,125 Zm00001d020874 GRMZM2G078691 ca5p16 CCAAT-HAP5-transcription factor 516 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 135,216,263 135,216,865 Zm00001d023466 GRMZM2G052499 ca5p17 CCAAT-HAP5-transcription factor 517 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,445,727 6,447,046 AC201832.3_FG006 ca5p18 CCAAT-HAP5-transcription factor 518 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,573,868 119,575,960 Zm00001d012133 GRMZM2G479610 ca5p2 CCAAT-HAP5-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,640,352 168,640,741 Zm00001d036648 GRMZM2G161680 ca5p3 CCAAT-HAP5-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 96,210,403 96,211,140 Zm00001d034872 GRMZM2G083964 ca5p4 CCAAT-HAP5-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 304,416,011 304,432,351 Zm00001d024230 GRMZM2G311316 ca5p5 CCAAT-HAP5-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 58,448,599 58,449,354 Zm00001d012134 GRMZM2G375448 ca5p6 CCAAT-HAP5-transcription factor 56 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,648,634 168,649,023 Zm00001d046967 GRMZM2G124421 ca5p7 CCAAT-HAP5-transcription factor 57 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 113,422,355 113,423,101 Zm00001d007436 GRMZM2G105317 ca5p8 CCAAT-HAP5-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 231,673,422 231,677,391 Zm00001d052621 GRMZM2G091433 ca5p9 CCAAT-HAP5-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,062,098 195,068,004 Zm00001d002346 GRMZM2G046070 cad1 cinnamyl alcohol dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from NM_001137309 Chr2 10,649,171 10,653,316 GRMZM2G121897 cadtfr10 CCAAT-DR1-transcription factor 10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 68,729,341 68,730,919 Zm00001d032328 GRMZM2G146286 cadtfr11 CCAAT-DR1-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 222,602,363 222,608,275 Zm00001d045772 GRMZM2G167576 cadtfr12 CCAAT-DR1-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 38,367,392 38,368,180 GRMZM2G020305 cadtfr13 CCAAT-DR1-transcription factor 13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,568,019 204,571,253 Zm00001d019101 GRMZM2G152822 cadtfr14 CCAAT-DR1-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 16,745,486 16,746,406 Zm00001d010574 GRMZM2G064426 cadtfr15 CCAAT-DR1-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 120,713,490 120,716,661 Zm00001d019865 GRMZM2G012654 cadtfr16 CCAAT-DR1-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 71,121,964 71,124,116 Zm00001d042196 GRMZM2G473152 cadtfr2 CCAAT-DR1-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 155,843,175 155,843,714 Zm00001d050242 GRMZM2G147712 cadtfr3 CCAAT-DR1-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 75,567,139 75,573,713 Zm00001d039957 GRMZM2G478501 cadtfr4 CCAAT-DR1-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 20,590,750 20,592,623 Zm00001d049485 GRMZM2G444073 cadtfr5 CCAAT-DR1-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 31,972,821 31,973,600 Zm00001d006813 GRMZM2G180947 cadtfr6 CCAAT-DR1-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 217,201,427 217,202,044 Zm00001d051697 GRMZM2G124663 cadtfr7 CCAAT-DR1-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 167,044,925 167,045,719 Zm00001d012445 GRMZM5G866699 cadtfr8 CCAAT-DR1-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 174,626,161 174,634,719 Zm00001d030151 GRMZM5G809663 cadtfr9 CCAAT-DR1-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 108,955,564 108,956,702 Zm00001d019573 GRMZM2G173923 caf1 crs2 associated factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al. 2015 Chr7 43,781,038 43,811,942 Zm00001d040696 AC199526.5_FG003 caf2 crs2 associated factor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 58,880,502 58,892,481 Zm00001d044099 GRMZM2G121878 cah1 carbonic anhydrase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Studer et al 2014 Chr3 219,075,378 219,082,694 Zm00001d044096 GRMZM2G348512 cah2 carbonic anhydrase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Studer et al 2014 Chr3 219,038,137 219,043,860 Zm00001d044096 GRMZM2G348512 cah3 carbonic anhydrase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models one of two gene associated with GRMZM2G34851 in B73_V2 (see Studer et al 2014) Chr3 219,038,137 219,043,860 Zm00001d005920 GRMZM2G414528 cah4 carbonic anhydrase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Studer et al 2014 Chr2 192,762,349 192,766,625 Zm00001d020764 GRMZM2G145101 cah5 carbonic anhydrase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Studer et al 2014 Chr7 131,557,949 131,561,931 Zm00001d011454 GRMZM2G094165 cah6 carbonic anhydrase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Studer et al 2014 Chr8 150,927,227 150,934,087 Zm00001d038545 GRMZM2G117582 cal1 calmodulin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 159,656,851 159,657,300 Zm00001d040323 GRMZM2G067511 cal2 calmodulin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 38,197,170 38,197,511 Zm00001d028948 GRMZM2G152891 cal3 calmodulin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 52,518,690 52,523,101 Zm00001d003958 GRMZM2G143205 camta1 CAMTA-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 72,202,914 72,211,422 Zm00001d021516 GRMZM2G032336 camta2 CAMTA-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 154,821,346 154,840,399 Zm00001d042313 GRMZM2G171600 camta3 CAMTA-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 160,480,671 160,486,892 Zm00001d028007 GRMZM2G447551 camta4 CAMTA-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 20,105,976 20,131,237 Zm00001d025235 GRMZM2G152661 camta5 CAMTA-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 110,432,656 110,441,915 Zm00001d011013 GRMZM2G056014 cap1 calcium pump1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 136,856,323 136,861,244 Zm00001d028687 GRMZM2G428096 cap2 calcium pump2 v4 Chr1 43,083,284 43,088,852 Zm00001d047769 GRMZM2G162426 cap3 calcium pump3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AFW88771 Chr9 141,363,314 141,368,940 Zm00001d033886 AC233878.1_FG004 cap4 calcium pump4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 277,447,305 277,479,291 Zm00001d053889 GRMZM2G065494 cas1 cycloartenol synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,042,533 243,050,543 Zm00001d014848 GRMZM2G088212 cat1 catalase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 65,456,721 65,461,269 Zm00001d027511 GRMZM2G090568 cat2 catalase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 7,144,392 7,146,668 Zm00001d054044 GRMZM2G079348 cat3 catalase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 245,523,681 245,525,759 Zm00001d009763 GRMZM5G809587 cax1 calcium exchanger1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 80,087,989 80,092,194 Zm00001d002022 GRMZM2G040017 cax2 calcium exchanger2 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence AB044567 in B73_v2 assembly Chr2 4,547,285 4,552,574 Zm00001d044533 GRMZM2G011592 cax3 calcium exchanger3 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to AY108295 on B73_v2 Chr3 231,100,304 231,105,284 Zm00001d029976 GRMZM2G107575 cbl1 calcineurin B-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr1 97,209,569 97,214,377 Zm00001d044285 GRMZM2G116584 cbl10 calcineurin B-like10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr3 224,212,852 224,216,726 Zm00001d030955 GRMZM2G007555 cbl11 calcineurin B-like11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr1 168,915,204 168,928,386 Zm00001d053293 GRMZM2G137751 cbl12 calcineurin B-like12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr4 224,621,867 224,623,388 Zm00001d041392 GRMZM2G173424 cbl2 calcineurin B-like2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr3 115,687,793 115,691,499 Zm00001d033295 GRMZM2G112672 cbl3 calcineurin B-like3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr1 257,899,024 257,916,953 Zm00001d038730 GRMZM2G001221 cbl4 calcineurin B-like2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr6 163,424,160 163,426,976 Zm00001d044389 GRMZM2G041729 cbl5 calcineurin B-like5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr3 226,830,791 226,834,279 Zm00001d023504 GRMZM2G010093 cbl6 calcineurin B-like6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr10 7,631,028 7,634,680 Zm00001d023506 GRMZM2G033680 cbl7 calcineurin B-like7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr10 7,802,956 7,806,695 Zm00001d053293 GRMZM2G110080 cbl8 calcineurin B-like8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 Chr4 224,621,867 224,623,388 Zm00001d000046 GRMZM2G015324 cbl9 calcineurin B-like9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2016 B73V4_ctg182 1,051,027 1,054,330 Zm00001d016856 GRMZM2G113453 cbp1 calmodulin binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: L01496 Chr5 178,414,694 178,421,024 Zm00001d053753 GRMZM2G018837 cbp2 calmodulin binding protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 240,492,305 240,500,796 Zm00001d016259 GRMZM2G312827 cbp4 calmodulin binding protein4 Chr5 154,044,507 154,062,350 Zm00001d033925 GRMZM2G416388 cbs1 cystathionine beta synthase domain protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns with sequence in Avramova et al., 1996 (Fig 3) and Sorghum BAC sequence AF124045 in the syntenous region. Chr1 278,704,407 278,706,905 Zm00001d049543 GRMZM2G014902 cca1 circadian clock associated1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU955544; and assigned by the Grassius project, (Yilmaz et al 2009) to mybr79 Chr4 34,070,590 34,104,400 Zm00001d052944 GRMZM2G062772 ccamk1 calcium/calmodulin dependent protein kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to seqeunce accession DQ403196 (referenced in Ma et al 2012) Chr4 205,745,035 205,748,279 Zm00001d002736 GRMZM2G158657 ccd7 carotenoid cleavage dioxygenase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr2 20,731,283 20,734,451 Zm00001d043442 GRMZM2G446858 ccd8 carotenoid cleavage dioxygenase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guan et al., 2012 Chr3 200,059,008 200,062,529 Zm00001d010842 GRMZM2G380515 cchh1 Cys2His2 Zinc Finger1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 129,920,062 129,926,481 Zm00001d016793 GRMZM5G885700 cchh133 Cys2His2 Zinc Finger133 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 176,105,797 176,109,934 Zm00001d047976 GRMZM2G074032 cchh2 Cys2His2 Zinc Finger2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,835,862 146,839,383 Zm00001d028361 GRMZM2G465595 cchh25 Cys2His2 Zinc Finger25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 32,068,552 32,072,460 Zm00001d035514 GRMZM2G050939 cchh26 Cys2His2 Zinc Finger26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 30,749,990 30,753,788 Zm00001d016911 GRMZM2G023988 cchh3 Cys2His2 Zinc Finger3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 179,711,450 179,716,881 Zm00001d023558 GRMZM2G068710 cchh35 Cys2His2 Zinc Finger35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 10,165,237 10,166,640 Zm00001d035701 GRMZM2G175000 cchh4 Cys2His2 Zinc Finger4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 41,698,476 41,703,037 Zm00001d026684 GRMZM2G136494 cchh46 Cys2His2 Zinc Finger46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 149,857,632 149,859,149 Zm00001d034783 GRMZM2G470422 cchh5 Cys2His2 Zinc Finger5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 302,248,572 302,249,757 Zm00001d012430 AC205250.3_FG004 cchh6 Cys2His2 Zinc Finger6 Chr8 174,360,496 174,361,131 Zm00001d018894 GRMZM2G144645 cchh7 Cys2His2 Zinc Finger7 Chr7 8,554,885 8,562,634 Zm00001d016446 GRMZM2G098298 ccp1 cysteine protease1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 162,603,198 162,606,546 Zm00001d020636 GRMZM2G038636 ccp2 cysteine protease2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 125,837,492 125,842,596 Zm00001d026458 GRMZM2G073465 ccp3 cysteine protease3 Chr10 146,241,809 146,245,690 Zm00001d021615 GRMZM2G108849 ccp4 cysteine protease4 aligns to cDNA AY112465.1 Chr7 158,111,622 158,115,784 Zm00001d035689 GRMZM2G066326 ccp5 cysteine protease5 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment to cDNAs Chr6 41,139,965 41,141,457 Zm00001d034528 GRMZM2G170457 ccr1 cytochrome c reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 295,707,225 295,710,471 Zm00001d004997 GRMZM2G064896 ccr2 ubiquinol-cytochrome c reductase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 153,083,988 153,087,202 Zm00001d034196 GRMZM2G038301 ccs1 C-type cytochrome synthesis protein1 Belcher et al., 2015 Chr1 286,308,027 286,310,892 Zm00001d024909 GRMZM2G381691 cct1 CO CO-LIKE TIMING OF CAB1 protein domain1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from coordinates in Hung et al 2012 Chr10 94,430,850 94,433,495 Zm00001d000176 GRMZM2G004483 cct2 CO CO-LIKE TIMING OF CAB1 protein domain2 B73V4_ctg181 47,426 49,963 Zm00001d019279 GRMZM2G082924 cda1 cytidine deaminase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 25,301,424 25,304,588 Zm00001d005459 GRMZM2G008216 cda2 cytidine deaminase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 174,943,009 174,945,711 Zm00001d027373 GRMZM2G008327 cdc2 cell division control protein2 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models EU961894 Chr1 3,960,300 3,964,921 Zm00001d000168 GRMZM2G063192 cdc201 cell division cycle201 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zheng et al., 2016 B73V4_ctg50 189,024 191,498 Zm00001d016034 GRMZM2G130425 cdc202 cell division cycle202 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zheng et al., 2016 Chr5 140,715,515 140,719,221 Zm00001d034368 GRMZM2G134917 cdj1 chaperone DNA J homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 291,055,449 291,058,538 Zm00001d033210 GRMZM2G364069 cdj2 chaperone DNA J2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 254,194,092 254,197,449 Zm00001d014438 GRMZM2G166771 cdk8 cyclin dependent kinase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nunez-Rios et al., 2017 Chr5 46,913,470 46,918,669 Zm00001d042074 GRMZM2G125642 cdo105 Chr3 149,689,421 149,700,461 Zm00001d027441 GRMZM2G119494 cdo1081a Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU969516 Chr1 5,431,259 5,434,466 Zm00001d033753 GRMZM2G126038 cdo122a(nad) Chr1 272,915,846 272,919,834 Zm00001d013424 GRMZM2G145854 cdo122b(nad) Chr5 11,122,309 11,126,118 Zm00001d028359 GRMZM2G061096 cdo1387b(emp70) Chr1 32,043,753 32,048,554 Zm00001d039200 GRMZM2G067877 cdo202a(mcf) Chr6 172,421,714 172,433,606 Zm00001d026322 GRMZM2G029242 cdo244a(crp) Chr10 143,572,991 143,576,712 Zm00001d008752 GRMZM2G144403 cdo328 Chr8 18,999,372 19,006,082 Zm00001d020695 GRMZM2G024775 cdo412b Chr7 128,802,783 128,807,088 Zm00001d035964 GRMZM5G864414 cdo545 Chr6 62,961,816 62,967,802 Zm00001d013745 GRMZM2G044900 cdo795b Chr5 19,099,499 19,106,191 Zm00001d034401 GRMZM2G049547 cdo87b(ptk) Chr1 291,862,046 291,868,576 Zm00001d029048 GRMZM2G056462 cdo938a Chr1 56,094,245 56,104,240 Zm00001d014033 GRMZM5G854036 cdo98a Chr5 29,808,369 29,824,010 Zm00001d032699 GRMZM2G010362 cdo98b Chr1 235,073,263 235,106,928 Zm00001d014773 GRMZM2G115518 cdpk1 calcium dependent protein kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence D84507 Chr5 62,639,884 62,646,464 Zm00001d013109 GRMZM2G320506 cdpk10 calcium-dependent protein kinase 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ007366 Chr5 4,781,512 4,784,720 Zm00001d004812 GRMZM2G047486 cdpk11 calcium dependent protein kinase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 140,809,252 140,813,969 Zm00001d036416 GRMZM2G173928 cdpk13 calcium dependent protein kinase13 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: D84508 Chr6 87,481,068 87,487,593 Zm00001d036008 GRMZM2G178756 cdpk14 calcium dependent protein kinase14 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU946805 Chr6 65,514,626 65,517,557 Zm00001d028582 GRMZM2G441511 cdpk15 calcium dependent protein kinase15 Chr1 39,799,383 39,800,220 Zm00001d029018 GRMZM2G006404 cdpk16 calcium dependent protein kinase16 Chr1 55,041,075 55,043,628 Zm00001d011392 GRMZM2G025387 cdpk17 calcium dependent protein kinase17 Chr8 149,387,614 149,392,198 Zm00001d013105 GRMZM2G027351 cdpk18 calcium dependent protein kinase18 Chr5 4,762,654 4,766,640 Zm00001d021835 GRMZM2G028086 cdpk19 calcium dependent protein kinase19 Chr7 164,162,976 164,166,758 Zm00001d004998 GRMZM2G365815 cdpk2 calcium dependent protein kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU958676 Chr2 153,089,892 153,092,511 Zm00001d010579 GRMZM2G030673 cdpk20 calcium dependent protein kinase20 Chr8 120,806,361 120,811,444 Zm00001d011666 GRMZM2G047479 cdpk21 calcium dependent protein kinase21 Chr8 158,082,120 158,084,527 Zm00001d015100 GRMZM2G157068 cdpk22 calcium dependent protein kinase22 Chr5 75,366,376 75,373,323 Zm00001d009708 GRMZM2G058305 cdpk23 calcium dependent protein kinase23 Chr8 77,013,599 77,017,336 Zm00001d038409 GRMZM2G088361 cdpk24 calcium dependent protein kinase24 Chr6 156,603,002 156,614,078 Zm00001d022166 GRMZM2G109843 cdpk25 calcium dependent protein kinase25 Chr7 171,503,608 171,509,248 Zm00001d043150 GRMZM2G167276 cdpk26 calcium dependent protein kinase26 Chr3 190,207,243 190,210,350 Zm00001d012457 GRMZM2G311220 cdpk27 calcium dependent protein kinase27 Chr8 174,849,024 174,856,985 Zm00001d010659 GRMZM2G340224 cdpk28 calcium dependent protein kinase28 Chr8 123,186,799 123,189,450 Zm00001d052713 GRMZM2G332660 cdpk29 calcium dependent protein kinase29 Chr4 198,407,129 198,409,355 Zm00001d006479 GRMZM2G168706 cdpk3 calcium dependent protein kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of cDNA sequence D85039 to B73_V2 Chr2 209,563,817 209,568,015 Zm00001d026018 GRMZM2G321239 cdpk4 calcium dependent protein kinase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence D87042 alignment to B73_V2 Chr10 136,174,872 136,179,753 Zm00001d002540 GRMZM2G314396 cdpk5 calcium dependent protein kinase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 14,993,653 14,998,930 Zm00001d053016 GRMZM2G035843 cdpk6 calcium dependent protein kinase6 Chr4 209,194,062 209,197,337 Zm00001d051502 GRMZM2G081310 cdpk7 calcium dependent protein kinase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: L15390 Chr4 160,498,471 160,504,465 Zm00001d021623 GRMZM2G154489 cdpk8 calcium dependent protein kinase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U28376 Chr7 158,301,155 158,305,234 Zm00001d040555 GRMZM2G322186 cef1 Zea CEFD homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From Entrez Gene 100284775 Chr3 49,418,717 49,420,159 Zm00001d038533 GRMZM2G158526 cenH3 centromeric histone H3 [not in Entrez Gene Aug 2018] Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to cDNA sequence Chr6 159,380,616 159,390,229 Zm00001d044220 GRMZM2G114315 cenpc1 centromere protein C 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 222,160,707 222,170,731 Zm00001d024723 GRMZM2G101875 cer8 eceriferum8 Chr10 85,128,123 85,133,157 Zm00001d009795 GRMZM2G112336 cesa1 cellulose synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 81,764,683 81,771,357 Zm00001d032776 GRMZM2G445905 cesa10 cellulose synthase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY372244 Chr1 237,886,808 237,891,037 Zm00001d043477 GRMZM2G055795 cesa11 cellulose synthase 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY372245 Chr3 201,448,887 201,454,662 Zm00001d020531 GRMZM2G142898 cesa12 cellulose synthase 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY372246 Chr7 121,208,571 121,213,304 Zm00001d043477 GRMZM2G037413 cesa13 cellulose synthase13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiao et al., 2017 Chr3 201,448,887 201,454,662 Zm00001d037636 GRMZM2G027723 cesa2 cellulose synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 132,563,362 132,570,425 Zm00001d039660 GRMZM2G039454 cesa3 cellulose synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 10,945,251 10,952,016 Zm00001d019149 GRMZM2G424832 cesa4 cellulose synthase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU942461 Chr7 19,277,318 19,283,307 Zm00001d034553 GRMZM2G111642 cesa5 cellulose synthase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 296,072,136 296,078,144 Zm00001d034770 GRMZM2G113137 cesa6 cellulose synthase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 301,722,755 301,728,981 Zm00001d019507 GRMZM2G025231 cesa7 cellulose synthase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 38,301,954 38,308,175 Zm00001d019317 GRMZM2G177631 cesa8 cellulose synthase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 27,567,011 27,572,466 Zm00001d005250 GRMZM2G018241 cesa9 cellulose synthase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 165,690,684 165,696,645 Zm00001d015366 GRMZM2G026117 cf1 camouflage1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 86,475,220 86,478,975 Zm00001d038922 GRMZM5G813259 cfm1 cp RNA splicing factor, CRM domain containing protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 166,977,536 166,982,310 Zm00001d025629 GRMZM2G094072 cfm2 CRM family member2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to sequence EU047713 Chr10 124,622,263 124,638,536 Zm00001d007572 GRMZM2G436001 cfm3 CRM family member3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to sequence EU084957 Chr2 235,053,907 235,060,019 Zm00001d020230 GRMZM2G142740 cfm4 cp RNA splicing factor, CRM domain containing protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 101,295,370 101,299,977 Zm00001d025706 AC214507.3_FG001 cfm6 CRM family member6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ402046 Chr10 126,880,549 126,888,843 zma-MIR156b cg1 corngrass1 Chr3 0 0 Zm00001d047166 GRMZM2G113873 cgs1 cystathionine gamma-synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 120,520,071 120,525,521 Zm00001d037382 GRMZM2G162783 cgt1 C-glucosyl transferase1 Zhang et al., 2018 Chr6 123,791,605 123,793,032 Zm00001d013391 GRMZM5G878347 chb101a chromatin remodeling complex subunit B (Swi3) Chr5 10,268,268 10,276,931 Zm00001d033825 GRMZM2G047038 chb101b chromatin remodeling complex subunit B (Swi3) Gene model association inferred from similarity with B73 RefGen_v3 gene models mybr53 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 274,885,788 274,896,921 Zm00001d034635 GRMZM2G155329 chi1 chalcone flavanone isomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment with sequence EU964968 for chi1, Chr1 298,580,972 298,582,430 Zm00001d012972 GRMZM2G119186 chi3 chalcone flavanone isomerase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BLAST to chi1 sequence, mapping data; and synteny with barley and rice Chr5 2,582,304 2,584,012 Zm00001d018278 GRMZM2G095778 chi4 chalcone flavanone isomerase4 Chr5 217,822,234 217,826,421 Zm00001d016144 GRMZM2G311919 chi5 chalcone flavanone isomerase5 Chr5 146,540,230 146,555,384 Zm00001d013013 GRMZM2G043453 chld1 Mg chelataseD1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 3,206,170 3,213,965 Zm00001d037984 GRMZM2G162672 chlg1 chlorophyll synthase G1 Chr6 144,381,242 144,390,852 Zm00001d026603 GRMZM2G323024 chlh1 Mg chelatase subunit H 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 148,758,023 148,764,012 Zm00001d043988 GRMZM2G453805 chn1 chitinase chem5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 215,679,092 215,679,979 Zm00001d036370 GRMZM2G145461 chn2 chitinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 85,905,987 85,906,962 Zm00001d014842 GRMZM2G389582 chn3 chitinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 65,145,138 65,146,204 Zm00001d019758 GRMZM2G170734 chph1 chlorophyllase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr7 56,865,812 56,867,212 Zm00001d032926 GRMZM2G127421 chph2 chlorophyllase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 243,418,415 243,419,837 Zm00001d007978 GRMZM2G177165 chr101 chromatin complex subunit A 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 244,407,619 244,413,284 Zm00001d033827 GRMZM2G071025 chr106 chromatin complex subunit A 106 Gene model association inferred from similarity with B73 RefGen_v3 gene models from ENTREZ GENE 100273981 Chr1 275,021,147 275,027,856 Zm00001d024816 GRMZM2G097289 chr122 chromatin complex subunit A Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 89,407,915 89,426,926 Zm00001d032801 GRMZM2G435541 chr124 chromatin complex subunit A Gene model association inferred from similarity with B73 RefGen_v3 gene models split gene model Chr1 238,596,562 238,629,956 Zm00001d049605 GRMZM2G574858 chr127 chromatin complex subunit A 127 Chr4 37,186,170 37,193,409 Zm00001d024677 GRMZM2G393742 chr156 chromatin complex subunit A 156 Chr10 83,366,109 83,371,712 Zm00001d022576 GRMZM2G108166 chr166 chromatin complex subunit A 166 Chr7 180,275,715 180,280,398 Zm00001d051324 GRMZM2G178435 chr167 chromatin complex subunit A 167 Chr4 154,315,290 154,320,142 Zm00001d023760 GRMZM6G007923 chs1 chitin synthase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT042386 & DQ244778 Chr10 19,075,995 19,079,402 Zm00001d024009 GRMZM2G009443 cip1 cytokinin inducible protease1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 36,528,738 36,535,462 Zm00001d028949 GRMZM2G174896 cipk3 calcineurin B-like-interacting protein kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 52,582,858 52,587,987 Zm00001d000080 GRMZM2G383240 cipk8 calcineurin B-like-interacting protein kinase8 B73V4_ctg31 421,411 431,957 Zm00001d005748 GRMZM2G330049 cipk9 calcineurin B-like-interacting protein kinase9 Chr2 185,946,481 185,947,866 Zm00001d027667 GRMZM2G028521 citt1 citrate transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 10,614,579 10,622,700 Zm00001d007951 GRMZM2G143602 cka1 CK2 protein kinase alpha 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 243,948,909 243,953,867 Zm00001d034125 GRMZM2G047855 cka2 CK2 protein kinase alpha 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 284,545,422 284,551,392 Zm00001d018669 GRMZM5G845755 cka4 CK2 protein kinase alpha 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 2,251,936 2,257,510 Zm00001d002778 GRMZM5G857992 ckb1 CK2 regulatory subunit B1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 22,322,661 22,328,202 Zm00001d032732 GRMZM2G116885 cki1 cyclin-dependent kinase inhibitor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 236,508,473 236,511,638 Zm00001d014046 GRMZM2G037926 cki2 cyclin-dependent kinase inhibitor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiao et al., 2017 Chr5 30,559,090 30,562,350 Zm00001d027585 GRMZM2G157510 cki3 cyclin-dependent kinase inhibitor3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiao et al., 2017 Chr1 8,485,866 8,489,268 Zm00001d048363 GRMZM2G358931 cki4 cyclin-dependent kinase inhibitor4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiao et al., 2017 Chr9 155,124,086 155,127,652 Zm00001d018149 GRMZM2G101613 cki5 cyclin-dependent kinase inhibitor5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiao, Q Chr5 215,542,515 215,544,271 Zm00001d052174 GRMZM2G084570 cki6 cyclin-dependent kinase inhibitor6 v4 Xiao et al., 2017 Chr4 181,715,802 181,717,531 Zm00001d044927 GRMZM2G343769 cki7 cyclin-dependent kinase inhibitor7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiao et al., 2017 Chr9 7,467,236 7,468,913 Zm00001d048837 GRMZM2G154414 cki8 cyclin-dependent kinase inhibitor8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiao et al., 2017 Chr4 6,173,083 6,174,482 Zm00001d039520 GRMZM2G146644 cko1 cytokinin oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Mameaux et al 2012 Chr3 6,768,568 6,770,834 Zm00001d042148 GRMZM2G050997 cko2 cytokinin oxidase 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from maize Cell Genomics Project (Oct 2013) Chr3 153,591,150 153,593,841 Zm00001d011890 GRMZM2G167220 cko3 cytokinin oxidase 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment to AJ606943, and chr 8 genetic map position (Massonneau 2004) Chr8 164,045,195 164,048,986 Zm00001d043293 GRMZM5G817173 cko4 cytokinin oxidase 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence AW506922 and GU160398 Chr3 194,807,024 194,810,736 Zm00001d012641 GRMZM2G024476 cko4b cytokinin oxidase4b Gene model association inferred from similarity with B73 RefGen_v3 gene models from position in SUPL Table S1 of Vyroubalova et al 2009 Chr8 177,673,222 177,677,285 Zm00001d008862 GRMZM2G325612 cko5 cytokinin oxidase 5 from alignment of AQ844401 and GU160400 Chr8 22,933,354 22,936,966 Zm00001d032046 GRMZM2G348452 ckx10 cytokinin oxidase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of B73_v2 to FJ269181 Chr1 210,548,810 210,553,536 Zm00001d025885 GRMZM2G122340 ckx11 cytokinin oxidase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by Gu et al 2010 Chr10 133,022,288 133,031,500 Zm00001d002989 GRMZM2G008792 ckx12 cytokinin oxidase12 Gene model association inferred from similarity with B73 RefGen_v3 gene models pre Vyroubalova et al 2009 Chr2 28,930,734 28,935,603 Zm00001d032664 GRMZM2G404443 ckx6 cytokinin oxidase6 from GU160401 Chr1 233,548,082 233,551,762 Zm00001d053578 GRMZM2G114427 ckx7 cytokinin oxidase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models as assigned by Gu et al 2010 Chr4 235,114,056 235,116,023 Zm00001d053578 GRMZM2G134634 ckx8 cytokinin oxidase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from SUPL table S1 of Vryoubalova et al 2009 Chr4 235,114,056 235,116,023 Zm00001d053579 GRMZM2G162048 ckx8b cytokinin oxidase8b Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequece GU160402 for cko8 (Gu et al 2010; Vyroubalova et al 2009) Chr4 235,221,490 235,224,289 Zm00001d046356 GRMZM2G303707 ckx9 cytokinin oxidase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models based on AC194337.2-contig42 per Vyroubalova Chr9 83,663,514 83,665,446 Zm00001d013126 GRMZM2G159291 cl10169_-1 aligns to sequence EU973858 assigned to the entrez gene record 100278482 Chr5 5,155,184 5,157,905 Zm00001d034055 GRMZM2G024231 cl11011_1 Chr1 282,598,451 282,608,453 Zm00001d001898 GRMZM2G009994 cl11096_1 Chr2 2,553,344 2,559,999 Zm00001d053858 GRMZM2G052740 cl11409_1a Chr4 242,390,665 242,395,306 Zm00001d007318 GRMZM2G005990 cl1288_1a Chr2 228,269,951 228,282,379 Zm00001d030640 GRMZM2G135045 cl13018_1 Chr1 150,287,615 150,295,914 Zm00001d040678 cl14964_1 Chr3 57,611,250 57,618,983 Zm00001d026584 GRMZM2G150014 cl16117_1 Chr10 148,384,227 148,387,093 Zm00001d052263 CL171_2 Chr4 185,228,834 185,234,452 Zm00001d016770 GRMZM2G438622 cl22768_2 Chr5 175,413,523 175,419,968 Zm00001d003380 GRMZM2G107003 cl22897_1a Chr2 42,239,268 42,240,320 Zm00001d023340 GRMZM2G129804 cl24029_1 Chr10 3,669,883 3,672,428 Zm00001d001896 GRMZM2G104538 cl25041_1a Chr2 2,509,567 2,511,414 Zm00001d039038 GRMZM2G102779 cl2592_1 Chr6 169,020,979 169,022,727 Zm00001d033575 GRMZM2G094698 cl26491_-1 Chr1 267,540,332 267,545,933 Zm00001d005065 GRMZM2G444808 cl26752_1 Chr2 156,948,668 156,951,694 Zm00001d031269 GRMZM2G110143 cl3166_1a Chr1 184,545,305 184,548,977 Zm00001d052231 GRMZM2G021912 cl32627_1e Chr4 184,152,128 184,156,210 Zm00001d025452 GRMZM2G010797 cl32758_1 Chr10 119,056,861 119,059,431 Zm00001d042555 GRMZM2G026855 cl32876_1 Chr3 171,667,233 171,670,207 Zm00001d013196 GRMZM2G114634 cl35669_1 Chr5 6,191,202 6,194,942 Zm00001d047677 GRMZM2G006341 cl37086_1 Chr9 139,088,455 139,094,438 Zm00001d026127 GRMZM2G084491 cl37280_1 Chr10 139,138,426 139,205,090 Zm00001d027581 GRMZM2G018579 cl3927_1a Chr1 8,372,150 8,373,610 Zm00001d040234 GRMZM2G031043 cl40463_1a Chr3 33,191,029 33,198,395 Zm00001d039448 GRMZM2G133314 cl40794_1 Chr3 4,599,630 4,609,909 GRMZM2G142344 cl42326_1 Chr4 191,944,776 191,948,747 Zm00001d004326 GRMZM2G064698 cl4283_2a Chr2 103,393,808 103,396,558 Zm00001d014760 GRMZM2G116243 cl439_1b Chr5 61,826,956 61,833,388 Zm00001d002314 GRMZM2G008060 cl44168_1 overlaps with GRMZM2G308957 Chr2 10,148,440 10,150,441 Zm00001d031178 GRMZM2G131245 cl4488_1 Chr1 181,310,179 181,314,255 Zm00001d037532 GRMZM2G021846 cl46_1 Chr6 128,399,274 128,418,621 Zm00001d022405 GRMZM2G010342 cl48276_1 Chr7 176,865,421 176,884,518 Zm00001d037401 GRMZM2G457789 cl5367_1b Chr6 124,532,947 124,584,221 Zm00001d030094 GRMZM2G090500 cl7929_1 Chr1 105,181,711 105,186,026 Zm00001d050227 GRMZM2G119696 cl8508_1 Chr4 74,759,042 74,763,247 Zm00001d049449 GRMZM2G064868 cld1 cold regulated protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 30,656,934 30,669,525 AC191109.3_FG001 cle14 clavata3/esr-related14 Je et al., 2016 Chr2 228,749,730 228,750,254 Zm00001d047879 GRMZM5G818232 cle16 clavata3/esr-related16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr9 144,101,923 144,102,207 Zm00001d022023 GRMZM2G008651 cle20 clavata3/esr-related20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr7 168,226,252 168,226,512 GRMZM5G826174 cle21 clavata3/esr-related21 Je et al., 2016 Chr1 226,281,053 226,281,753 Zm00001d038680 GRMZM2G070192 cle22 clavata3/esr-related22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr6 162,442,729 162,443,088 Zm00001d014620 GRMZM2G098918 cle23 clavata3/esr-related23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr5 56,109,800 56,110,231 Zm00001d051859 GRMZM2G123818 cle24 clavata3/esr-related24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr4 172,522,475 172,523,174 GRMZM2G525788 cle25 clavata3/esr-related25 from: LOC103644665 Chr1 63,215,440 63,215,543 Zm00001d008722 GRMZM2G473147 cle26 clavata3/esr-related26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr8 17,796,696 17,797,061 Zm00001d025918 GRMZM2G468688 cle27 clavata3/esr-related27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr10 133,758,312 133,758,584 Zm00001d013520 GRMZM5G875999 cle5 clavata3/esr-related5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr5 13,513,911 13,514,693 Zm00001d043427 GRMZM2G052776 cle6 clavata3/esr-related6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 199,485,601 199,485,861 GRMZM2G372364 cle7 clavata3/esr-related7 Je et al., 2016 Chr4 7,570,324 7,571,104 Zm00001d028895 GRMZM2G056373 clpp2 chloroplast protease complex P2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Arabidopsis clpp1 AB022326 & maize BT065143 Chr1 49,992,905 49,996,375 Zm00001d003857 GRMZM2G134668 clx1 calnexin homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 63,033,369 63,037,024 Zm00001d025305 GRMZM2G022180 clx2 calnexin homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 113,480,669 113,484,076 Zm00001d043182 GRMZM5G859195 cmk1 cytidine methyl kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene 100282760 Chr3 190,807,759 190,813,079 Zm00001d015459 GRMZM2G075333 cml1 coumarate ligase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 91,459,227 91,463,857 Zm00001d012674 GRMZM2G116087 cmu1 chorismate mutase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence EU968465.1 GI:195642229 Chr8 178,397,389 178,409,967 Zm00001d015509 GRMZM2G179454 cmu2 chorismate mutase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence EU951879.1 GI:195604333 Chr5 94,540,334 94,543,558 Zm00001d032152 GRMZM2G131205 cncr1 cinnamoyl CoA reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 214,573,739 214,579,407 Zm00001d019669 GRMZM2G131836 cncr2 cinnamoyl CoA reductase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 49,321,600 49,323,862 Zm00001d019265 GRMZM2G097030 cngt1 cytokinin N-glucosyl transferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence FJ748891 Chr7 24,771,102 24,772,823 Zm00001d048292 GRMZM2G169365 cnh1 carbon-nitrogen hydrolase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,002,038 154,006,592 Zm00001d042833 GRMZM2G125411 coi1 coronatine insensitive1 Chr3 181,426,991 181,430,952 Zm00001d010082 GRMZM2G151536 coi2 coronatine insensitive2 Chr8 98,725,100 98,728,770 Zm00001d038273 GRMZM2G353209 coi3 coronatine insensitive3 Chr6 152,958,703 152,962,372 Zm00001d028543 GRMZM2G079112 coi4 coronatine insensitive4 Chr1 38,734,079 38,737,199 Zm00001d037327 GRMZM2G012717 col10 C2C2-CO-like-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 121,369,894 121,371,711 Zm00001d003162 GRMZM2G095598 col11 C2C2-CO-like-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 34,080,161 34,081,769 Zm00001d017939 GRMZM2G041991 col12 2C2-CO-like-transcription factor 12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,407,150 210,409,118 Zm00001d046925 GRMZM2G038783 col13 C2C2-CO-like-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 111,032,442 111,034,142 Zm00001d051684 GRMZM2G042198 col14 C2C2-CO-like-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 166,653,210 166,659,390 Zm00001d029149 GRMZM2G134671 col15 C2C2-CO-like-transcription factor 1 Chr1 60,531,179 60,535,397 Zm00001d031662 GRMZM2G159996 col16 C2C2-CO-like-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 197,918,030 197,921,539 Zm00001d049347 GRMZM2G176173 col17 C2C2-CO-like-transcription factor 17 Chr4 27,315,744 27,316,583 Zm00001d015468 GRMZM2G148772 col18 C2C2-CO-like-transcription factor 18 Chr5 91,970,566 91,972,678 Zm00001d024200 GRMZM2G092363 col19 C2C2-CO-like-transcription factor 19 Chr10 55,274,175 55,275,011 Zm00001d033719 GRMZM2G144346 col2 C2C2-CO-like-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 272,190,270 272,192,279 Zm00001d022500 GRMZM2G414423 col20 C2C2-CO-like-transcription factor 20 Chr7 178,894,022 178,895,945 Zm00001d017176 GRMZM2G021777 col3 C2C2-CO-like-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,032,923 188,034,708 Zm00001d045661 GRMZM2G107886 col4 C2C2-CO-like-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 32,056,769 32,058,471 Zm00001d017885 GRMZM2G075562 col5 C2C2-CO-like-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,614,260 209,620,254 Zm00001d045804 GRMZM2G013398 col6 C2C2-CO-like-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 40,102,185 40,108,023 Zm00001d025770 AC233888.1_FG002 col7 C2C2-CO-like-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 129,045,322 129,046,879 Zm00001d013443 GRMZM2G114137 col8 C2C2-CO-like-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 11,710,780 11,712,488 Zm00001d051684 GRMZM2G167560 col9 C2C2-CO-like-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 166,653,210 166,659,390 Zm00001d046761 GRMZM2G076617 com1 completion of meiotic recombination1 Chr9 104,738,764 104,741,698 Zm00001d045735 GRMZM2G405368 conz1 constans1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 36,009,335 36,013,889 Zm00001d041785 GRMZM2G143354 cop1 coatomer protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 138,022,243 138,030,035 Zm00001d026283 GRMZM2G028929 cop2 coatomer protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,760,846 142,765,876 Zm00001d020623 GRMZM2G003179 copt1 copper transporter1 Chr7 125,321,586 125,322,729 Zm00001d043323 GRMZM2G042412 copt2 copper transporter2 Chr3 196,539,125 196,539,604 Zm00001d053025 GRMZM2G317696 copt3 copper transporter3 Chr4 209,807,648 209,808,160 Zm00001d048318 GRMZM2G178859 cox10a cytochrome c oxidase subunit10a Chr9 154,463,094 154,468,191 Zm00001d027848 GRMZM2G162776 cox10b cytochrome c oxidase subunit10b Chr1 15,120,744 15,125,845 Zm00001d014090 GRMZM2G458208 cpn1 chaperonin 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models overlap with GRMZM2G111477 Chr5 31,979,596 31,985,197 Zm00001d052101 GRMZM2G091189 cpn10 chaperonin10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T18415 Chr4 179,536,713 179,538,773 Zm00001d032789 GRMZM2G416120 cpn2 chaperonin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Z12115 Chr1 238,195,329 238,201,192 Zm00001d018930 GRMZM2G153754 cpp1 CPP-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,617,295 9,622,711 Zm00001d041445 GRMZM2G701689 cpp10 CPP-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 120,191,179 120,204,285 Zm00001d043378 GRMZM2G059678 cpp11 CPP-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,206,233 198,229,237 Zm00001d037461 GRMZM2G342588 cpp12 CPP-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 126,010,753 126,018,314 Zm00001d041444 AC203865.3_FG001 cpp13 CPP-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 120,186,769 120,190,340 Zm00001d031008 GRMZM2G015097 cpp2 CPP-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 173,135,204 173,140,452 Zm00001d010713 GRMZM2G173198 cpp3 CPP-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 125,353,037 125,356,933 Zm00001d038660 GRMZM2G060170 cpp4 CPP-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 161,968,078 161,971,277 Zm00001d031009 GRMZM2G322090 cpp5 CPP-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 173,165,434 173,190,178 Zm00001d033274 GRMZM2G366584 cpp6 CPP-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,013,447 257,022,654 Zm00001d012688 GRMZM2G104246 cpp7 CPP-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 178,683,463 178,701,014 Zm00001d010713 GRMZM2G096600 cpp8 CPP-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 125,353,037 125,356,933 Zm00001d015990 GRMZM2G388148 cpp9 CPP-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 137,506,224 137,522,034 Zm00001d029648 GRMZM2G044481 cpps2 copalyl diphosphate synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to genomic sequence Chr1 81,308,232 81,312,047 Zm00001d024512 GRMZM2G068808 cpps3 copalyl diphosphate synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: CF634281 Chr10 75,069,687 75,075,183 Zm00001d026483 GRMZM2G104294 cpr2 cytochrome P-450 reductase2 Chr10 146,795,024 146,816,445 Zm00001d034736 GRMZM2G156565 cps1 chloroplast protein synthesis1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,979,516 300,987,458 Zm00001d000399 AC215201.3_FG005 cps2 chloroplast protein synthesis2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Not found in Gene Aug 2015 B73V4_ctg4 28,493 32,925 Zm00001d008497 GRMZM5G858471 cps5 chloroplast protein synthesis5 v4 Belcher et al., 2015 Chr8 10,439,104 10,447,983 Zm00001d029632 GRMZM2G048821 cptk1 chloroplast thymidine kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 80,760,581 80,766,373 Zm00001d026277 GRMZM2G032282 cpx2 coproporphyrinogen III oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of cDNA DQ250641 to B73 AGP_v2 (MLS) Chr10 142,707,254 142,721,455 Zm00001d023425 GRMZM2G051637 cr4 crinkly4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,235,583 5,238,288 Zm00001d042268 GRMZM2G032132 crn1 coryne1 Chr3 158,268,237 158,272,672 Zm00001d021716 GRMZM2G083950 crp1 chloroplast RNA processing1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 161,220,659 161,224,485 Zm00001d020900 GRMZM5G802566 crp11 cp 3'-tRNA processing endoribonuclease11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 135,891,863 135,894,153 Zm00001d018891 GRMZM2G377761 crp4 chloroplast RNA processing4 Gene model association inferred from similarity with B73 RefGen_v3 gene models provided by Barkan (2010) Chr7 8,478,320 8,494,304 Zm00001d001865 GRMZM2G040736 crr1 cytokinin response regulator1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics project (Oct 2013) Chr2 2,078,887 2,079,669 Zm00001d026594 GRMZM2G392101 crr2 cytokinin response regulator2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 148,669,998 148,671,302 Zm00001d011849 GRMZM2G319187 crr4 cytokinin response regulator4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 162,775,996 162,782,061 Zm00001d042066 GRMZM6G980248 crr5 cytokinin response regulator5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY104728 Chr3 149,521,452 149,548,954 Zm00001d050768 GRMZM2G096171 crr7 cytokinin response regulator7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 121,766,673 121,769,040 Zm00001d028265 GRMZM2G099797 crr8 cytokinin response regulator8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 28,609,279 28,614,414 Zm00001d032373 GRMZM2G078412 crs1 chloroplast RNA splicing1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of cDNA AF290414 |gi|9837549 to B73_V2 (Jul 2011) Chr1 224,244,775 224,257,054 Zm00001d008559 GRMZM2G132021 crs2 chloroplast RNA splicing2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of B73_v2 to cDNA AF225708 |gi| 6752918. Chr8 12,962,024 12,970,253 Zm00001d048171 GRMZM2G481231 crs4 chloroplast RNA splicing4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 151,310,394 151,315,075 Zm00001d045014 GRMZM2G053196 crs4a chloroplast RNA splicing4a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 10,221,137 10,230,897 Zm00001d019283 GRMZM2G358059 crt2 calreticulin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 25,499,872 25,503,849 Zm00001d052932 GRMZM2G108457 crti1 carotene isomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to sequence published by Vallabhaneni and Wurtzel, 2009. Chr4 205,269,595 205,274,287 Zm00001d007502 GRMZM2G106531 crti2 carotene isomerase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to sequence published by Vallabhaneni and Wurtzel, 2009. Chr2 233,393,208 233,398,004 Zm00001d012868 GRMZM2G144273 crti3 carotene isomerase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr5 1,369,611 1,375,366 Zm00001d014203 GRMZM2G017805 crup1 CruP paralog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence for fl cDNA ZMBFC0139E12 described in suppl data of Bradbury et al 2012 Chr5 36,522,150 36,523,481 Zm00001d016915 GRMZM2G024739 cry1 cryptochrome1 Chr5 179,755,601 179,759,432 Zm00001d003477 GRMZM2G049549 cry2 cryptochrome2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT036578 Chr2 45,426,581 45,430,349 Zm00001d045944 GRMZM2G172152 cry3 cryptochrome3 Chr9 48,378,179 48,386,336 Zm00001d050850 GRMZM2G104262 cry4 cryptochrome4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 126,958,963 126,962,865 Zm00001d028578 GRMZM2G356459 csd1 CSD-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,740,669 39,744,045 Zm00001d053908 GRMZM2G389768 csd2 CSD-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 243,422,436 243,423,185 GRMZM2G141150 csd3 CSD-transcription factor 3 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 72,594,595 72,596,618 GRMZM5G895313 csd4 CSD-transcription factor 4 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,487,131 143,488,239 Zm00001d023810 GRMZM2G015886 csld1 cellulose synthase-like D1 Chr10 22,804,035 22,808,448 Zm00001d042044 csr1 chloroplast srp54 receptor1 v4 Chr3 148,445,216 148,448,764 Zm00001d031747 GRMZM2G318475 csu1132 Chr1 200,675,571 200,679,396 Zm00001d030316 GRMZM2G009465 csu1138 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 122,018,879 122,020,803 Zm00001d013002 GRMZM2G034278 csu134b(thf) homology to AF174486 Chr5 2,973,947 2,975,342 Zm00001d046746 GRMZM2G037485 csu147 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 104,198,101 104,199,039 Zm00001d017118 GRMZM2G030606 csu173 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,974,546 185,976,455 Zm00001d043109 GRMZM2G054821 csu191 Chr3 189,363,211 189,370,191 Zm00001d048649 GRMZM2G131409 csu221 Chr4 2,612,412 2,612,975 Zm00001d039456 GRMZM2G050845 csu230 Chr3 4,838,566 4,841,548 Zm00001d049048 GRMZM2G124644 csu235 Chr4 13,883,904 13,884,785 Zm00001d023309 GRMZM2G068465 csu25b(P450) Chr10 2,640,438 2,644,386 Zm00001d029725 GRMZM2G162292 csu3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 84,224,821 84,227,369 Zm00001d016691 GRMZM2G113332 csu308 Chr5 172,643,939 172,645,561 Zm00001d008230 GRMZM2G081462 csu319 Chr8 2,034,108 2,036,318 Zm00001d011467 GRMZM2G154508 csu31a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 151,280,912 151,281,930 Zm00001d029548 GRMZM2G036543 csu323 Chr1 75,699,185 75,711,640 Zm00001d008820 GRMZM2G147882 csu329 Chr8 21,650,403 21,654,524 Zm00001d039387 GRMZM2G093405 csu32a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 3,142,741 3,145,531 Zm00001d005146 GRMZM2G164440 csu337 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 161,023,220 161,023,567 Zm00001d013819 GRMZM2G132036 csu340 Chr5 21,424,283 21,431,659 Zm00001d002499 GRMZM2G092190 csu425(gct) Chr2 14,086,379 14,100,162 Zm00001d029420 GRMZM2G077897 csu452 Chr1 69,749,777 69,753,725 Zm00001d027541 GRMZM2G096247 csu454(gst) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,882,159 7,883,359 Zm00001d045113 GRMZM2G109720 csu471 Chr9 13,149,723 13,154,901 Zm00001d031640 GRMZM2G135654 csu505(rpL7) Chr1 197,108,702 197,111,394 Zm00001d033704 GRMZM2G057394 csu554a(rnh) Chr1 271,704,791 271,710,881 Zm00001d013453 GRMZM2G123459 csu554b(rnh) Chr5 11,966,175 11,968,379 Zm00001d018633 GRMZM2G120652 csu582 Chr7 1,389,242 1,390,195 Zm00001d027392 GRMZM2G453794 csu589 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,220,852 4,296,236 Zm00001d016704 GRMZM2G073950 csu600 Chr5 173,174,126 173,178,848 Zm00001d046404 GRMZM2G463953 csu623a Chr9 87,563,336 87,563,743 Zm00001d023658 GRMZM2G011136 csu625 Chr10 13,789,308 13,796,140 Zm00001d047679 GRMZM2G006429 csu634 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 139,129,905 139,133,566 Zm00001d042350 GRMZM2G359505 csu636 Chr3 162,539,736 162,542,986 Zm00001d022965 csu696 Chr1 257,829,203 257,830,028 Zm00001d044142 GRMZM2G364528 csu845 Chr3 220,335,813 220,336,259 Zm00001d009488 GRMZM2G021331 csu849(atpb) Gene model association inferred from similarity with B73 RefGen_v3 gene models from p-csu849 (W21766) Chr8 67,043,287 67,046,926 Zm00001d036708 GRMZM2G089491 csu923(sec61) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 98,284,028 98,286,043 Zm00001d025338 GRMZM2G147390 csu948 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU966448 Chr10 114,698,888 114,700,369 Zm00001d000350 GRMZM5G809546 csy1 chloroplast SecY-1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene B73V4_ctg35 44,795 47,751 Zm00001d027886 GRMZM2G064732 ct2 compact plant2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Bommert, et al. 2013 Chr1 16,722,714 16,730,676 Zm00001d003190 GRMZM2G051943 cta1 chitinase A1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 35,066,062 35,067,313 Zm00001d025753 GRMZM2G005633 ctb1 chitinase B1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: M84165 Chr10 128,400,712 128,402,032 Zm00001d022160 GRMZM2G048846 ctn1 caltractin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,442,295 171,444,896 Zm00001d000406 GRMZM2G373106 ctn4 chitinase4 Noonan et al., 2017 B73V4_ctg46 27,798 28,721 Zm00001d015856 GRMZM2G063851 cts1 citrate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: W49861 Chr5 126,813,401 126,819,662 Zm00001d053685 GRMZM2G064023 cts2 citrate synthase2 Chr4 239,005,570 239,012,726 Zm00001d053684 GRMZM2G063909 cts3 citrate synthase3 Chr4 238,977,831 238,989,000 Zm00001d016248 GRMZM2G135588 cts4 citrate synthase4 Chr5 152,956,416 152,961,046 Zm00001d010858 GRMZM2G166089 cul1 cullin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 130,735,309 130,743,521 Zm00001d024855 GRMZM2G166694 cul2 cullin2 Chr10 90,671,654 90,682,705 GRMZM2G463640 cyb6 cytochrome b6 Zaidi et al., 2015 Chr5 21,522,922 21,524,744 Zm00001d010656 GRMZM2G034647 cyc1 cyclin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 123,103,586 123,106,431 Zm00001d019696 GRMZM2G107377 cyc10 cyclin10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Garza-Aguilar et al., 2016 Chr7 51,335,278 51,337,377 Zm00001d005293 GRMZM2G161382 cyc11 cyclin11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Garza-Aguilar et al., 2016 Chr2 168,005,838 168,007,927 Zm00001d021031 GRMZM2G408242 cyc12 cyclin12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 140,949,104 140,954,205 Zm00001d052185 GRMZM2G075117 cyc13 cyclin13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 182,579,495 182,583,632 Zm00001d036360 GRMZM2G073671 cyc3 cyclin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 85,712,835 85,716,668 Zm00001d012560 GRMZM2G310115 cyc4 cyclin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100274285 Chr8 176,648,813 176,651,657 Zm00001d008221 GRMZM2G005619 cyc5 cyclin5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT055761 Chr8 1,656,468 1,659,625 Zm00001d009011 cyc6 cyclin6 V4 Chr8 30,110,204 30,114,064 Zm00001d012560 GRMZM2G310115 cyc7 cyclin7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 176,648,813 176,651,657 Zm00001d002662 GRMZM2G138886 cyc8 cyclin8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Sabelli et al., 2014 Chr2 18,693,524 18,697,258 Zm00001d014756 GRMZM2G017081 cyc9 cyclin9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Jia et al., 2016 Chr5 61,635,981 61,641,076 Zm00001d044673 GRMZM5G899349 cyp1 cytochrome P450 homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 234,567,054 234,570,848 Zm00001d044153 GRMZM2G370745 cyp10 cytochrome P450 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models From match to Genbank sequences. Chr3 220,577,774 220,580,963 Zm00001d044159 GRMZM2G129860 cyp11 cytochrome P450 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence. Chr3 220,748,190 220,754,600 Zm00001d005822 GRMZM2G091588 cyp12 cytochrome P450 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Match to sequence published in Persans et al. Chr2 189,708,364 189,712,407 Zm00001d018488 GRMZM5G837869 cyp13 cytochrome P450 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence. Chr5 221,696,671 221,702,095 Zm00001d029822 GRMZM2G143202 cyp14 cytochrome P450 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence. Chr1 88,696,531 88,703,297 Zm00001d053782 GRMZM2G010221 cyp15 cytochrome P450 15 from Farre et al. 2013 and CSH screen of p-G24C-02 probe of npi593a Chr4 240,980,104 240,984,661 Zm00001d002937 cyp16 cytochrome P450 16 v4 Chr2 27,420,578 27,426,388 Zm00001d022075 GRMZM2G138008 cyp17 cytochrome P-450 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Suzuki et al., 2015 Chr7 169,511,917 169,513,877 Zm00001d029526 GRMZM2G470442 cyp18 cytochrome P-450 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Suzuki et al., 2015 Chr1 74,783,210 74,785,241 Zm00001d018839 GRMZM2G102079 cyp19 cytochrome P-450 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: ACG28049 Chr7 6,964,999 6,966,594 Zm00001d007918 GRMZM2G139467 cyp20 cytochrome P-450 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Richter et al., 2016 Chr2 242,408,695 242,410,359 GRMZM2G054603 cyp21 cytochrome P-450 21 NCBI: not predicted in v4 Chr9 156,449,824 156,452,070 Zm00001d014136 GRMZM2G067591 cyp22 cytochrome P-450 22 Chr5 33,745,314 33,746,963 Zm00001d046207 GRMZM2G018612 cyp23 cytochrome P-450 23 Chr9 71,959,994 71,962,191 Zm00001d039697 GRMZM2G023952 cyp24 cytochrome P-450 24 Chr3 12,344,885 12,347,351 Zm00001d053569 GRMZM2G070508 cyp25 cytochrome P-450 25 Chr4 234,845,163 234,847,523 Zm00001d019415 cyp6 cytochrome P450 v4 Chr7 32,852,022 32,852,396 Zm00001d011419 GRMZM2G021436 cyp7 cytochrome P450 7 Chr8 149,989,038 149,991,368 Zm00001d033020 GRMZM2G167986 cyp8 cytochrome P-450 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 247,311,909 247,314,314 Zm00001d046334 GRMZM2G138248 cyp9 cytochrome P450 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Irmisch et al., 2015 Chr9 81,310,177 81,311,766 Zm00001d008379 GRMZM2G082185 cys1 cysteine synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU969699 Chr8 6,803,766 6,807,373 Zm00001d031136 GRMZM2G005887 cys2 cysteine synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542438 Chr1 179,010,347 179,015,072 Zm00001d000237 GRMZM2G168474 czog1 cis-zeatin O-glucosyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence AF318075 B73V4_ctg44 71,975 73,515 Zm00001d012335 GRMZM2G110511 czog2 cis-zeatin O-glucosyltransferase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 172,652,749 172,654,298 Zm00001d039634 GRMZM2G036340 d1 dwarf plant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Teng et al., 2013; from: JX307637 (Chen et al., 2014) Chr3 9,745,656 9,748,061 Zm00001d045563 GRMZM2G093195 d3 dwarf plant3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 26,822,040 26,825,680 Zm00001d033680 GRMZM2G144744 d8 dwarf plant8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 270,918,085 270,919,977 Zm00001d013465 GRMZM2G024973 d9 dwarf plant9 Chr5 12,228,329 12,230,206 Zm00001d005347 GRMZM2G084881 dar1 monodehydroascorbate reductase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 170,386,767 170,391,584 Zm00001d043991 GRMZM2G070360 dba2 DNA binding activity2 Chr3 215,828,080 215,837,379 Zm00001d026642 GRMZM2G011513 dba3 DNA binding activity3 Chr10 149,278,822 149,280,179 Zm00001d003195 GRMZM2G018876 dbb1 double B-box zinc finger protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 35,306,395 35,307,301 Zm00001d021278 GRMZM2G143718 dbb10 double B-box zinc finger protein10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr7 147,632,776 147,636,889 Zm00001d045323 GRMZM2G028594 dbb11 double B-box zinc finger protein11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr9 18,935,792 18,946,869 Zm00001d025957 GRMZM2G098442 dbb12 double B-box zinc finger protein12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr10 134,741,085 134,742,626 Zm00001d002806 GRMZM2G131982 dbb2 double B-box zinc finger protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr2 23,197,620 23,201,256 Zm00001d039437 GRMZM5G834596 dbb3 double B-box zinc finger protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr3 4,316,527 4,318,099 Zm00001d051018 GRMZM2G019335 dbb4 double B-box zinc finger protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr4 137,141,449 137,142,700 Zm00001d014765 GRMZM2G118884 dbb5 double B-box zinc finger protein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr5 62,282,614 62,284,983 Zm00001d017147 GRMZM2G095299 dbb6 double B-box zinc finger protein6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr5 187,053,602 187,054,914 Zm00001d017412 GRMZM2G110541 dbb7 double B-box zinc finger protein7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr5 195,189,894 195,191,367 Zm00001d036214 GRMZM2G070446 dbb8 double B-box zinc finger protein8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr6 77,322,780 77,327,461 Zm00001d036418 GRMZM2G116475 dbb9 double B-box zinc finger protein9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr6 87,645,024 87,646,346 Zm00001d032295 GRMZM2G061487 dbf1 DRE-binding protein 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU963205; ereb204 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 220,776,886 220,777,674 Zm00001d000179 GRMZM5G889719 dbf2 DRE-binding protein 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models ereb1 assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg181 214,703 215,548 Zm00001d006169 GRMZM2G124037 dbf3 DRE-binding protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 200,397,718 200,398,512 Zm00001d036003 GRMZM2G380377 dbp4 DRE-binding protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to FJ805752 Chr6 65,322,473 65,323,171 Zm00001d052018 GRMZM2G108147 dbptf1 DBP-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 176,597,115 176,600,543 Zm00001d018394 GRMZM2G180430 dbptf2 DBP-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 219,962,014 219,970,575 Zm00001d045128 GRMZM2G149132 dbptf3 DBP-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 13,703,300 13,708,121 Zm00001d046450 GRMZM2G158734 dbptf4 DBP-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 90,491,829 90,495,556 Zm00001d024857 GRMZM2G083459 dcd1 discordia1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 90,991,479 90,996,675 Zm00001d027412 GRMZM2G040762 dcl101 dicer-like 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to sequence EU951021 Chr1 4,724,456 4,736,832 Zm00001d032655 GRMZM2G413853 dcl102 dicer-like 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models from ChromDB sequence & XM_008666626 Chr1 233,262,795 233,282,063 Zm00001d025830 GRMZM2G160473 dcl103 dicer-like 103 Gene model association inferred from similarity with B73 RefGen_v3 gene models from ChromDB sequence Chr10 131,181,940 131,237,004 Zm00001d042432 GRMZM5G814985 dcl104 dicer-like 104 Gene model association inferred from similarity with B73 RefGen_v3 gene models from ChromDB sequence Chr3 167,033,044 167,043,664 Zm00001d013796 GRMZM2G301405 dcl105 dicer-like 105 Gene model association inferred from similarity with B73 RefGen_v3 gene models from ChromDB sequence Chr5 20,375,070 20,392,119 Zm00001d025830 GRMZM2G160473 dcl4 dicer-like4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Petsch et al., 2015 Chr10 131,181,940 131,237,004 Zm00001d005950 GRMZM2G040933 dct1 dicarboxylic acid transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to cDNA AB112937 Chr2 193,717,043 193,722,275 Zm00001d031253 GRMZM2G086258 dct2 dicarboxylic acid transporter2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 alignment to cDNA AB112938 Chr1 183,880,314 183,892,062 Zm00001d004925 GRMZM2G403562 ddt1 DDT-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 149,182,642 149,191,037 Zm00001d050753 GRMZM2G064145 ddt2 DDT-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 120,953,532 120,958,594 Zm00001d016827 GRMZM2G337749 ddt3 DDT-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 177,540,939 177,547,554 Zm00001d022417 GRMZM2G128176 ddt4 DDT-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 177,212,840 177,223,260 Zm00001d011560 AC196465.3_FG006 ddt5 DDT-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,457,261 154,486,289 Zm00001d023391 GRMZM2G314661 ddt6 DDT-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,470,647 4,479,429 Zm00001d023718 GRMZM2G091819 de18 defective18 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of sequence DQ995287 and Bernardi, J et al. 2012. Chr10 16,725,273 16,728,563 Zm00001d019158 AF546188.1_FG007 de30 defective endosperm B30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Based on homology to Genbank Acc No. AY434688 (Kim et al. 2004) Chr7 19,547,036 19,547,758 Zm00001d024303 GRMZM2G368890 def1 defensin-like protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Liu et al., 2016 Chr10 62,903,387 62,904,298 Zm00001d024302 GRMZM2G368861 def2 defensin-like protein2 Liu et al., 2016 Chr10 62,902,288 62,903,162 Zm00001d018254 GRMZM2G149869 def3 defensin-like protein3 Chr5 217,440,263 217,440,881 Zm00001d017292 GRMZM2G153488 def4 defensin-like protein4 Chr5 192,003,418 192,004,251 Zm00001d028818 GRMZM2G321753 dek1 defective kernel1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 47,566,046 47,589,502 Zm00001d053802 GRMZM2G087226 dek10 defective kernel10 Qi et al., 2017 Chr4 241,403,906 241,405,327 Zm00001d034882 GRMZM2G110851 dek2 defective kernel2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Qi et al., 2016 Chr1 304,635,949 304,637,841 Zm00001d033749 GRMZM2G066749 dek35 defective kernel35 Chen et al., 2016 Chr1 272,717,186 272,719,728 Zm00001d013136 GRMZM5G892151 dek36 defective kernel36 Wang et al., 2017 Chr5 5,332,065 5,334,626 Zm00001d003543 GRMZM2G021319 dek37 defective kernel37 Chr2 47,658,250 47,659,893 Zm00001d014595 GRMZM2G048851 dek38 defective kernel38 Chr5 54,656,640 54,665,486 Zm00001d047013 GRMZM2G345128 dek39 defective kernel39 Li et al., 2017 Chr9 115,242,444 115,244,729 Zm00001d010368 GRMZM2G117388 der1 derlin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 111,481,667 111,489,438 Zm00001d012834 GRMZM2G082976 der2 derlin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY854015 Chr5 958,297 964,764 Zm00001d037687 GRMZM2G143817 der3 derlin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY854014 Chr6 133,982,114 133,986,795 Zm00001d034871 GRMZM2G112609 der4 derlin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY854016 Chr1 304,367,515 304,374,498 Zm00001d020970 GRMZM2G004683 dfr1 dihydroflavonoid reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU968270 Chr7 138,208,287 138,210,135 Zm00001d031488 GRMZM2G168893 dfr2 dihydroflavonol-4-reductase2 Chr1 191,775,035 191,776,945 Zm00001d037760 GRMZM2G130749 dgati2 diacylglycerol acyltransferase-typeI2 Chr6 136,606,701 136,613,008 Zm00001d051628 GRMZM2G042356 dgatii1 diacylglycerol acyltransferase-typeII1 Chr4 165,057,547 165,060,492 Zm00001d045927 GRMZM2G050641 dgatii2 diacylglycerol acyltransferase-typeII2 Chr9 47,487,176 47,490,826 Zm00001d024765 GRMZM2G122943 dgatiii1 diacylglycerol acyltransferase-typeIII1 Chr10 87,211,477 87,213,531 Zm00001d030770 GRMZM2G076911 dgk1 diacylglycerol kinase1 Chr1 159,024,989 159,029,990 Zm00001d024212 GRMZM2G094452 dgk2 diacylglycerol kinase2 Chr10 56,828,755 56,838,148 Zm00001d002163 GRMZM2G106578 dgk3 diacylglycerol kinase3 Chr2 6,959,896 6,965,024 Zm00001d029550 GRMZM2G019562 dgk4 diacylglycerol kinase4 Chr1 75,797,114 75,806,603 Zm00001d023979 GRMZM5G827286 dgk5 diacylglycerol kinase5 Chr10 33,922,137 33,926,709 Zm00001d018333 GRMZM2G128214 dgk6 diacylglycerol kinase6 Chr5 218,592,450 218,601,374 Zm00001d043263 GRMZM2G062429 dgk7 diacylglycerol kinase7 Chr3 193,696,180 193,702,740 Zm00001d011034 GRMZM5G855672 dhar1 dehydroascorbate reductase like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models sequence similarity to wheat DHAR cDNA AY074784 Chr8 137,153,416 137,156,549 Zm00001d011035 GRMZM2G005710 dhar2 dehydroascorbate reductase like2 similar to wheat DHAR cDNA AY074784 Chr8 137,157,191 137,159,528 Zm00001d035595 GRMZM2G035502 dhar3 dehydroascorbate reductase like3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to wheat cDNA sequence AY074784 Chr6 35,975,616 35,978,715 Zm00001d037240 GRMZM5G826194 dhar4 glutathione dehydroascorbate reductase4 Chr6 117,483,616 117,495,193 Zm00001d037894 GRMZM2G079440 dhn1 dehydrin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 141,324,495 141,325,549 Zm00001d033483 GRMZM2G169372 dhn13 dehydrin13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,981,642 263,981,944 Zm00001d013647 GRMZM2G448511 dhn14 dehydrin14 Chr5 16,131,695 16,132,021 Zm00001d045321 GRMZM2G098750 dhn2 dehydrin2 Chr9 18,926,278 18,927,731 Zm00001d051420 GRMZM2G373522 dhn3 dehydrin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU944673 Chr4 157,872,166 157,873,662 Zm00001d043551 GRMZM2G031308 dhn6 dehydrin6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 203,608,743 203,613,188 Zm00001d012776 GRMZM2G002786 dhn7 dehydrin7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 180,682,193 180,684,162 Zm00001d041776 GRMZM2G076946 dhr2 dhurrinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 137,250,657 137,254,412 Zm00001d016365 GRMZM2G015132 dla1 dihydrolipoamide S-acetyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 159,330,634 159,338,014 Zm00001d009402 GRMZM2G080116 dlc1 dynein light chain homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics project (Oct 2013) Chr8 62,916,759 62,917,979 Zm00001d022613 GRMZM2G067921 dlf1 delayed flowering1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 181,089,568 181,090,715 Zm00001d036719 GRMZM2G171317 dmag1 DNA-3-methyladenine glycosylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 98,774,782 98,779,038 Zm00001d023430 GRMZM2G113228 dmag2a DNA-2-methyladenine glycosylase II A Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,412,838 5,417,544 Zm00001d039115 GRMZM2G114592 dmag2b DNA-2-methyladenine glycosylase II B Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 170,339,523 170,340,530 Zm00001d044629 GRMZM2G109618 dmc1 disrupted meiotic cDNA homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NP 001141379 (Sidhu et al., 2017) Chr3 233,608,712 233,612,903 Zm00001d042584 GRMZM5G856881 dmes1 diphosphocytidyl methyl erythritol synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens, BF et al. 2014 Chr3 172,740,091 172,743,103 Zm00001d012197 GRMZM2G172032 dmes2 diphosphocytidyl methyl erythritol synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens, BF et al. 2014 Chr8 169,924,646 169,928,100 Zm00001d028128 GRMZM2G005844 dng1 DNA glycosylase superfamily protein1 Chr1 23,601,341 23,609,376 Zm00001d023698 GRMZM2G152757 dnp1 diphosphonucleotide phosphatase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,001,989 16,006,337 Zm00001d043552 GRMZM2G111510 dnp2 diphosphonucleotide phosphatase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF307152 Chr3 203,662,615 203,670,708 Zm00001d031278 dof1 DNA-binding with one finger1 v4 Chr1 184,859,499 184,860,221 Zm00001d038693 GRMZM2G435475 dof10 C2C2-Dof-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,633,220 162,633,915 Zm00001d030727 GRMZM2G123900 dof11 C2C2-Dof-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 156,208,993 156,211,073 Zm00001d013783 GRMZM2G178767 dof12 C2C2-Dof-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 20,028,246 20,077,272 Zm00001d032578 GRMZM2G456452 dof13 C2C2-Dof-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 231,149,171 231,150,619 Zm00001d021591 GRMZM2G134545 dof14 C2C2-Dof-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 157,433,264 157,434,346 Zm00001d024790 GRMZM2G451771 dof15 C2C2-Dof-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,456,372 88,457,198 Zm00001d020837 GRMZM2G089850 dof16 C2C2-Dof-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 134,352,325 134,353,122 Zm00001d051439 GRMZM2G114998 dof17 C2C2-Dof-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 158,534,101 158,536,459 Zm00001d030897 GRMZM2G131897 dof18 C2C2-Dof-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 166,299,983 166,300,456 Zm00001d042736 GRMZM2G135703 dof19 C2C2-Dof-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,528,531 178,529,508 Zm00001d005970 GRMZM2G009406 dof2 DNA binding with one finger2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 194,261,659 194,262,393 Zm00001d038281 GRMZM2G371058 dof20 C2C2-Dof-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,208,694 153,209,677 Zm00001d027846 GRMZM2G162749 dof21 C2C2-Dof-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,060,190 15,063,033 Zm00001d017575 GRMZM2G171852 dof22 C2C2-Dof-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,157,732 200,159,935 Zm00001d026096 GRMZM2G010290 dof23 C2C2-Dof-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 138,350,501 138,351,571 Zm00001d013200 GRMZM2G084130 dof24 C2C2-Dof-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 6,348,722 6,349,831 Zm00001d034163 GRMZM2G108865 dof25 C2C2-Dof-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 285,470,390 285,471,475 Zm00001d013724 GRMZM2G061292 dof26 C2C2-Dof-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,617,764 18,618,771 Zm00001d034651 GRMZM2G017470 dof27 C2C2-Dof-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 298,855,809 298,858,616 Zm00001d034653 GRMZM2G093725 dof28 C2C2-Dof-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 298,949,392 298,950,066 Zm00001d017788 GRMZM2G140694 dof29 C2C2-Dof-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 206,876,258 206,880,405 Zm00001d035651 GRMZM2G179069 dof3 DNA binding with one finger3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 38,682,464 38,684,890 Zm00001d028625 AC233935.1_FG005 dof30 C2C2-Dof-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 41,269,098 41,270,850 Zm00001d012963 GRMZM2G144188 dof31 C2C2-Dof-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,416,250 2,425,046 Zm00001d033093 GRMZM2G011832 dof32 C2C2-Dof-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 250,113,063 250,114,145 Zm00001d012963 GRMZM2G144172 dof33 C2C2-Dof-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,416,250 2,425,046 Zm00001d006463 GRMZM2G064655 dof34 C2C2-Dof-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,994,101 208,995,156 Zm00001d029512 GRMZM2G137502 dof36 C2C2-Dof-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 73,971,569 73,973,965 Zm00001d043402 GRMZM2G394973 dof37 C2C2-Dof-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,907,070 198,907,852 Zm00001d012280 GRMZM2G042218 dof38 C2C2-Dof-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,824,647 171,825,663 Zm00001d033325 GRMZM2G045678 dof39 C2C2-Dof-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 259,066,929 259,067,873 Zm00001d043904 GRMZM2G327189 dof4 C2C2-Dof-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 213,449,817 213,451,294 Zm00001d032999 GRMZM2G138455 dof40 C2C2-Dof-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 246,355,067 246,357,254 Zm00001d026628 GRMZM2G142718 dof41 C2C2-Dof-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 149,177,141 149,178,387 Zm00001d017900 GRMZM2G394941 dof42 C2C2-Dof-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,782,489 209,783,391 Zm00001d051577 GRMZM2G589696 dof43 C2C2-Dof-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 163,295,675 163,298,554 Zm00001d010740 AC209819.3_FG009 dof44 C2C2-Dof-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 126,441,198 126,441,836 Zm00001d012703 GRMZM2G082490 dof45 C2C2-Dof-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 178,952,194 178,952,865 Zm00001d041549 GRMZM2G176063 dof46 C2C2-Dof-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 126,665,476 126,667,691 Zm00001d022525 AC155434.2_FG006 dof47 C2C2-Dof-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 179,337,787 179,341,946 Zm00001d011058 GRMZM5G880268 dof5 C2C2-Dof-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 137,738,410 137,739,805 Zm00001d040362 GRMZM2G089949 dof6 C2C2-Dof-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 40,080,595 40,084,385 Zm00001d039482 GRMZM2G378490 dof7 C2C2-Dof-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 5,495,949 5,496,644 Zm00001d040455 GRMZM2G463525 dof8 C2C2-Dof-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 44,149,350 44,152,864 Zm00001d051700 GRMZM2G449950 dof9 C2C2-Dof-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 167,124,669 167,125,430 Zm00001d039446 GRMZM2G435338 dpold3a DNA polymerase delta subunit 3a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 4,590,953 4,596,170 Zm00001d008890 GRMZM2G005536 dpold3b DNA polymerase delta subunit 3b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 24,123,677 24,129,093 Zm00001d027363 GRMZM2G044247 dpr1 dihydrodipicolinate reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,775,217 3,778,050 Zm00001d046898 GRMZM2G027835 dps1 dihydrodipicolinate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of EU959911 to B73_V3 Chr9 109,488,450 109,491,432 Zm00001d042416 GRMZM2G362850 drh1 DEAD box RNA helicase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY466159 Chr3 166,411,975 166,416,359 Zm00001d048083 GRMZM2G102218 drl2 drooping leaf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models yab7 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,627,346 149,632,516 Zm00001d032423 GRMZM2G123896 drm1 dormancy associated1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY103814 Chr1 225,974,748 225,976,009 Zm00001d049871 GRMZM2G117329 dsc1 discolored kernel1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_V3 alignment to AF006498 Chr4 49,806,179 49,807,432 Zm00001d031667 GRMZM5G872204 dsc2 Discolored-paralog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Takacs, E et al. 2012 Chr1 198,119,172 198,130,785 Zm00001d021087 GRMZM2G059225 dsc3 Discolored-paralog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Takacs, E et al. 2012 Chr7 142,484,402 142,493,269 Zm00001d021887 GRMZM2G006324 dsul1 diSUMO-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Augustine et al, 2016 Chr7 165,376,358 165,377,110 Zm00001d015469 AC210848.3_FG004 dsy2 desynaptic2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Lee et al., 2015 Chr5 91,973,542 91,980,501 Zm00001d015168 GRMZM2G019121 dts1 aspartyl-tRNA synthetase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 78,188,078 78,192,203 Zm00001d000002 GRMZM2G141399 du1 dull endosperm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to seqence JF273457 B73V4_ctg150 193,401 204,736 Zm00001d018544 GRMZM2G433025 duf177 domain of unknown function177 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 222,689,298 222,696,547 Zm00001d002186 GRMZM2G114861 dv1 divergent spindle1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF272754 Chr2 7,609,522 7,614,852 Zm00001d029150 GRMZM2G063048 dvr1 divinyl reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence JX239752.1 Chr1 60,631,458 60,632,663 Zm00001d038087 GRMZM2G013657 dwil1 dwarf & irregular leaf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence reported in Jiang et al., 2012 Chr6 147,379,164 147,385,725 Zm00001d040163 GRMZM2G056975 dxr1 deoxy xylulose reductoisomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From sequence homology to Genbank sequence. Chr3 29,846,486 29,852,954 Zm00001d008427 GRMZM2G036290 dxr2 deoxy xylulose reductoisomerase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr8 8,429,852 8,436,838 Zm00001d038170 GRMZM2G137151 dxs1 deoxy xylulose synthase 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From Cordoba et al., 2011. Chr6 150,418,144 150,422,431 Zm00001d019060 GRMZM2G493395 dxs2 deoxy xylulose synthase 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models see Cordoba et al 2011 Chr7 14,494,700 14,497,925 Zm00001d045383 GRMZM2G173641 dxs3 deoxy xylulose synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of sequence HQ113384 to B73_v2 (Cordoba et al 2011) Chr9 20,241,125 20,246,184 Zm00001d045937 dzs10 delta zein structural10 v4 Chr9 47,916,398 47,916,850 Zm00001d037436 GRMZM2G100018 dzs18 delta zein structural18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 125,302,098 125,302,733 Zm00001d032741 GRMZM2G001699 e2f1 E2F-DP-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 237,008,000 237,012,244 Zm00001d045365 GRMZM2G169709 e2f10 E2F-DP-transcription factor 210 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 19,796,961 19,801,015 Zm00001d023465 GRMZM2G052515 e2f11 E2F-DP-transcription factor 211 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,427,340 6,432,014 Zm00001d037274 GRMZM2G060000 e2f12 E2F-DP-transcription factor 212 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 119,093,152 119,097,181 Zm00001d052288 GRMZM2G361659 e2f13 E2F-DP-transcription factor 213 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 186,086,302 186,089,507 Zm00001d038664 GRMZM5G829408 e2f14 E2F-DP-transcription factor 214 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,201,437 162,205,584 Zm00001d026355 GRMZM2G148506 e2f15 E2F-DP-transcription factor 215 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,165,524 144,168,971 Zm00001d050664 GRMZM2G041701 e2f16 E2F-DP-transcription factor 216 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 112,999,831 113,003,992 Zm00001d003755 AC214168.3_FG001 e2f17 E2F-DP-transcription factor 217 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 57,722,583 57,731,864 Zm00001d014132 GRMZM2G139024 e2f18 E2F-DP-transcription factor 218 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 33,578,544 33,584,855 Zm00001d027709 GRMZM2G086072 e2f19 E2F-DP-transcription factor 219 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 11,671,171 11,678,446 Zm00001d007384 GRMZM2G333591 e2f2 E2F-DP-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 230,438,790 230,442,944 Zm00001d033566 GRMZM2G351232 e2f3 E2F-DP-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 267,283,309 267,286,505 Zm00001d016737 AC233850.1_FG005 e2f4 E2F-DP-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 174,727,108 174,731,885 Zm00001d004512 GRMZM2G050590 e2f5 E2F-DP-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 115,910,521 115,916,044 Zm00001d048412 GRMZM2G063387 e2f6 E2F-DP-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 155,819,418 155,824,302 Zm00001d017986 GRMZM2G378665 e2f7 E2F-DP-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 211,406,416 211,411,375 Zm00001d016907 GRMZM2G404769 e2f8 E2F-DP-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 179,669,837 179,673,125 Zm00001d011597 GRMZM2G462623 e2f9 E2F-DP-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,439,885 155,445,416 Zm00001d022090 GRMZM2G456746 ea1 egg apparatus1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 170,014,769 170,015,026 Zm00001d011882 GRMZM2G129157 ebe1 embryo-sac basal-endosperm layer embryo-surrounding-region Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 163,875,069 163,878,710 Zm00001d037133 GRMZM2G167733 ebe2 embryo-sac basal-endosperm-layer embryo-surrounding-region2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542047 Chr6 113,546,755 113,548,492 Zm00001d036880 GRMZM2G137582 ebf1 EIN3-binding F-box protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 105,523,233 105,526,361 Zm00001d009182 GRMZM2G132903 ech1 enoyl-CoA hydratase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 41,433,035 41,440,080 Zm00001d021815 GRMZM2G107654 eif2 elongation initiation factor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T18419; gene model GRMZM2G150380 on RefGen_v1 corresponds to the gene model GRMZM2G107654 on RefGen_v2. Chr7 163,543,532 163,559,902 Zm00001d039518 GRMZM2G093050 eif3 eukaryotic initiation factor3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF073329 Chr3 6,553,963 6,562,166 Zm00001d014673 GRMZM2G116034 eif4 eucaryotic initiation factor4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF007580 Chr5 58,592,104 58,595,583 Zm00001d036480 GRMZM2G027995 eif4a eukaryotic initiation factor4a Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U73459 Chr6 89,893,907 89,897,716 Zm00001d000300 GRMZM2G165917 eif5 eucaryotic translation initiation factor5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene B73V4_ctg107 25,722 27,077 Zm00001d006760 GRMZM2G113696 eif5a elongation initiation factor5A Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 216,127,454 216,130,302 Zm00001d041682 GRMZM2G002616 eif6 eucaryotic initiation factor6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF076954 Chr3 133,075,625 133,080,137 Zm00001d014065 GRMZM2G022019 eif7 eucaryotic initiation factor7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF076955 Chr5 31,254,129 31,259,724 Zm00001d047563 GRMZM2G317584 eil1 ethylene insensitive-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 135,613,729 135,615,657 Zm00001d031445 AC234203.1_FG011 eil13 EIL-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 190,274,859 190,276,757 Zm00001d007188 GRMZM2G003558 eil2 EIL-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 224,126,723 224,128,510 Zm00001d028974 GRMZM2G033570 eil3 ethylene insensitive-like3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 53,368,438 53,370,381 Zm00001d020939 GRMZM2G006752 eil4 EIL-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 137,263,513 137,265,342 Zm00001d050861 AC210616.4_FG005 eil5 EIL-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 127,298,106 127,299,431 Zm00001d022530 GRMZM2G151811 eil6 EIL-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 179,471,476 179,472,840 Zm00001d003451 GRMZM2G044322 eil7 EIL-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 44,789,073 44,790,671 Zm00001d016924 GRMZM2G040481 eil8 EIL-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 180,142,976 180,144,265 Zm00001d039341 GRMZM2G068217 ein2 ethylene insensitive 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY359584 Chr3 2,111,719 2,119,789 Zm00001d017280 GRMZM2G370991 ein3 ethylene insensitive3 Chr5 191,573,773 191,578,115 Zm00001d009868 GRMZM2G151193 elfa1 elongation factor alpha1 Chr8 86,006,161 86,009,235 Zm00001d036904 GRMZM2G343543 elfa10 elongation factor 1-alpha10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 106,006,145 106,009,433 Zm00001d037905 AC233866.1_FG006 elfa11 elongation factor alpha11 Chr6 141,652,564 141,655,295 Zm00001d037875 GRMZM2G149768 elfa2 elongation factor alpha2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 140,722,761 140,725,875 Zm00001d037873 GRMZM2G154218 elfa3 elongation factor alpha3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 140,618,302 140,621,444 Zm00001d046449 GRMZM2G153541 elfa9 elongation factor 1-alpha9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from NM_001112117.1 Chr9 90,421,943 90,425,048 Zm00001d036959 GRMZM2G122871 elfg1 elongation factor gamma1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 107,398,589 107,403,318 Zm00001d007827 GRMZM2G355752 elip1 early light inducible protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from homology with Arabidopsis elip AF134132; Rodriguez et al, 2013 Chr2 240,431,883 240,432,461 Zm00001d018940 GRMZM2G425728 elip2 early light inducible protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from homology with Arabidopsis elip AF134132; Rodriguez et al, 2013 Chr7 9,985,533 9,990,001 Zm00001d011876 GRMZM5G861678 elm1 elongated mesocotyl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 163,614,240 163,618,286 Zm00001d046492 GRMZM2G101004 elm2 elongated mesocotyl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from primers in Shi et al., 2013 Chr9 92,290,431 92,299,586 Zm00001d054079 GRMZM2G384293 emb14 embryo defective 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models homology to Arabidopsis NOA1; NM_180335 (per Zhang et al., 2013) and from KC460269 (Li et al., 2015) Chr4 245,974,145 245,978,028 Zm00001d018366 GRMZM2G119691 emb17 embryo defective17 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: GenBank JQ811769 Chr5 219,238,426 219,241,502 Zm00001d046555 GRMZM2G136559 emb18 embryo specific18 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Genbank AJ431193 Chr9 95,832,622 95,834,867 Zm00001d034962 GRMZM5G884466 emb2 embryo specific2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al, 2012 Chr1 306,901,992 306,921,360 Zm00001d019166 GRMZM2G095078 embp1 EM binding protein1 homologue Chr7 19,967,615 19,972,466 Zm00001d033992 GRMZM2G078416 emp10 empty pericarp10 Cai et al., 2017 Chr1 280,585,851 280,594,549 Zm00001d049796 GRMZM2G388778 emp108 empty pericarp108 Chr4 44,971,523 44,972,893 Zm00001d052450 GRMZM2G353301 emp11 empty pericarp11 Ren et al., 2017 Chr4 190,301,720 190,308,562 Zm00001d011559 GRMZM2G060516 emp16 empty pericarp16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiu et al, 2016 Chr8 154,455,231 154,456,667 Zm00001d022480 AC212684.3_FG012 emp17 empty pericarp17 Yang et al., 2017 Chr7 178,455,391 178,457,655 Zm00001d034253 GRMZM2G471348 emp18 empty pericarp18 Chr1 288,021,954 288,024,917 Zm00001d005675 GRMZM2G039155 emp2 empty pericarp 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 183,064,274 183,068,668 Zm00001d033869 GRMZM2G092198 emp4 empty pericarp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of mRNA DQ291135 Chr1 276,803,098 276,804,885 Zm00001d042039 GRMZM2G060536 emp5 empty pericarp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from GenBank JX308939 Chr3 148,145,123 148,148,309 Zm00001d005959 GRMZM2G048392 emp6 empty pericarp6 Chettoor et al., 2014 Chr2 193,820,450 193,821,676 Zm00001d008298 GRMZM2G041231 emp7 empty pericarp7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sun et al., 2015 Chr8 4,550,744 4,552,774 Zm00001d036125 GRMZM2G014705 end1 early nodulin homolog1 Chr6 73,478,014 73,479,134 Zm00001d000418 GRMZM2G144610 endo1 endosperm specific protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg121 28,928 30,307 Zm00001d023430 GRMZM2G113228 endo3 endonuclease3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,412,838 5,417,544 Zm00001d050196 GRMZM2G073079 eng1 endo-1,3-1,4-beta-D-glucanase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 72,786,474 72,789,077 Zm00001d045431 GRMZM2G064302 eno1 enolase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 21,923,413 21,927,989 Zm00001d030373 GRMZM2G048371 eno2 enolase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from NM_001111901 Chr1 127,221,590 127,227,817 Zm00001d019967 GRMZM2G110548 epl101 enhancer of polycomb-like protein101 Chr7 81,037,496 81,041,060 Zm00001d017152 GRMZM2G129189 epr4 endochitinase precursor4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 187,133,409 187,134,532 Zm00001d045450 GRMZM5G877500 eps1 enolpyruvylshikimate phosphate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 22,538,569 22,542,325 Zm00001d009596 GRMZM2G158024 era1 E. coli Ras-like protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr8 72,389,684 72,393,869 Zm00001d030163 GRMZM2G144155 erd3 early responsive to dehydration3 Chr1 109,742,559 109,745,194 Zm00001d017591 GRMZM2G434203 ereb10 AP2-EREBP-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,872,270 200,873,106 AC209257.4_FG006 ereb100 AP2-EREBP-transcription factor 100 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,427,827 153,429,877 Zm00001d028017 GRMZM2G003466 ereb101 AP2-EREBP-transcription factor 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 20,410,911 20,411,813 Zm00001d020595 GRMZM2G052667 ereb102 AP2-EREBP-transcription factor 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 124,130,947 124,133,914 Zm00001d039424 GRMZM2G133168 ereb103 AP2-EREBP-transcription factor 103 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 3,934,183 3,934,776 Zm00001d017480 GRMZM5G816314 ereb104 AP2-EREBP-transcription factor 104 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 197,251,323 197,252,009 Zm00001d002618 GRMZM2G042756 ereb105 AP2-EREBP-transcription factor 105 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 16,960,148 16,960,816 Zm00001d048991 AC198403.3_FG001 ereb106 AP2-EREBP-transcription factor 106 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 11,781,874 11,782,518 Zm00001d017466 GRMZM2G057386 ereb107 AP2-EREBP-transcription factor 107 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,743,195 196,744,184 Zm00001d031499 GRMZM2G480434 ereb108 AP2-EREBP-transcription factor 108 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,022,614 192,023,222 Zm00001d020267 GRMZM2G141679 ereb109 AP2-EREBP-transcription factor 109 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 103,377,384 103,378,274 Zm00001d053195 GRMZM2G076896 ereb111 AP2-EREBP-transcription factor 111 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 219,203,452 219,206,136 Zm00001d030513 GRMZM2G039870 ereb112 AP2-EREBP-transcription factor 112 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 140,679,257 140,680,084 Zm00001d010175 GRMZM2G457562 ereb113 AP2-EREBP-transcription factor 113 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 103,046,515 103,049,001 Zm00001d018731 GRMZM2G008234 ereb114 AP2-EREBP-transcription factor 114 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 3,330,940 3,335,717 Zm00001d021208 GRMZM2G069146 ereb115 AP2-EREBP-transcription factor 115 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,038,525 146,039,307 Zm00001d021089 GRMZM2G131281 ereb116 AP2-EREBP-transcription factor 116 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,530,712 142,532,073 Zm00001d011134 GRMZM2G113078 ereb117 AP2-EREBP-transcription factor 117 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 140,017,045 140,019,085 Zm00001d008546 GRMZM2G081892 ereb118 AP2-EREBP-transcription factor 118 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 12,513,751 12,515,017 Zm00001d031673 GRMZM2G309731 ereb119 AP2-EREBP-transcription factor 119 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 198,259,709 198,260,293 Zm00001d009622 GRMZM2G100982 ereb12 AP2-EREBP-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 73,601,361 73,602,152 Zm00001d028066 AC200038.4_FG011 ereb120 AP2-EREBP-transcription factor 120 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,903,337 21,911,942 Zm00001d045204 GRMZM2G301860 ereb122 AP2-EREBP-transcription factor 122 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 15,996,069 15,996,644 Zm00001d028068 GRMZM2G461907 ereb123 AP2-EREBP-transcription factor 123 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,936,312 21,937,568 Zm00001d048297 GRMZM2G399098 ereb124 AP2-EREBP-transcription factor 124 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,094,049 154,095,017 Zm00001d025298 GRMZM2G023708 ereb125 AP2-EREBP-transcription factor 125 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 113,224,465 113,225,283 Zm00001d043782 GRMZM2G169654 ereb126 AP2-EREBP-transcription factor 126 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,069,089 210,070,258 Zm00001d051451 GRMZM2G000520 ereb127 AP2-EREBP-transcription factor 127 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 159,111,690 159,112,469 Zm00001d019475 AC233933.1_FG001 ereb128 AP2-EREBP-transcription factor 128 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 35,728,209 35,728,997 Zm00001d016616 GRMZM2G016434 ereb129 AP2-EREBP-transcription factor 129 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 170,223,307 170,225,943 Zm00001d052152 GRMZM2G011110 ereb13 AP2-EREBP-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 181,353,441 181,354,229 Zm00001d027878 GRMZM2G399072 ereb130 AP2-EREBP-transcription factor 130 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,356,238 16,360,518 Zm00001d003884 GRMZM2G087059 ereb131 AP2-EREBP-transcription factor 131 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 65,022,354 65,024,176 Zm00001d050948 GRMZM2G165257 ereb132 AP2-EREBP-transcription factor 132 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 133,138,782 133,139,666 Zm00001d038320 GRMZM2G100727 ereb133 AP2-EREBP-transcription factor 133 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,382,390 154,383,061 Zm00001d043491 GRMZM2G474326 ereb134 AP2-EREBP-transcription factor 134 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 201,681,540 201,682,688 Zm00001d036251 GRMZM2G328197 ereb135 AP2-EREBP-transcription factor 135 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 79,944,763 79,945,710 Zm00001d018191 GRMZM2G021369 ereb136 AP2-EREBP-transcription factor 136 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 216,112,775 216,113,527 Zm00001d031861 GRMZM2G028386 ereb137 AP2-EREBP-transcription factor 137 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 204,458,557 204,459,636 Zm00001d015639 GRMZM2G079653 ereb138 AP2-EREBP-transcription factor 138 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 102,583,546 102,584,181 Zm00001d018158 GRMZM2G103085 ereb139 AP2-EREBP-transcription factor 139 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 215,716,411 215,717,121 Zm00001d052087 GRMZM2G018398 ereb14 AP2-EREBP-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 179,070,181 179,072,822 Zm00001d050137 GRMZM2G348307 ereb140 AP2-EREBP-transcription factor 140 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 68,398,270 68,400,314 Zm00001d041981 GRMZM2G097182 ereb141 AP2-EREBP-transcription factor 141 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 146,542,859 146,543,596 Zm00001d033353 GRMZM2G010100 ereb142 AP2-EREBP-transcription factor 142 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 260,045,773 260,047,029 Zm00001d020540 GRMZM2G141219 ereb143 AP2-EREBP-transcription factor 143 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 121,545,625 121,549,412 Zm00001d016260 GRMZM2G005301 ereb144 AP2-EREBP-transcription factor 144 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 154,200,894 154,201,658 Zm00001d036889 GRMZM2G106591 ereb145 AP2-EREBP-transcription factor 145 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 105,660,981 105,662,401 Zm00001d009573 GRMZM2G021790 ereb146 AP2-EREBP-transcription factor 146 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 71,470,305 71,471,572 Zm00001d043205 GRMZM2G310368 ereb147 AP2-EREBP-transcription factor 147 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 191,580,135 191,580,848 Zm00001d009103 GRMZM2G053503 ereb148 AP2-EREBP-transcription factor 148 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 36,535,940 36,537,052 Zm00001d025281 GRMZM2G425798 ereb149 AP2-EREBP-transcription factor 149 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 112,504,950 112,507,200 Zm00001d052026 GRMZM2G111415 ereb15 AP2-EREBP-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 176,839,153 176,840,184 Zm00001d031501 GRMZM2G033656 ereb150 AP2-EREBP-transcription factor 150 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,063,299 192,064,027 Zm00001d019096 GRMZM2G379652 ereb153 AP2-EREBP-transcription factor 153 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 16,182,358 16,183,347 Zm00001d002867 GRMZM2G026926 ereb154 AP2-EREBP-transcription factor 154 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 25,029,642 25,031,000 Zm00001d052365 GRMZM2G060465 ereb155 AP2-EREBP-transcription factor 155 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 188,309,258 188,309,908 Zm00001d026447 GRMZM2G421033 ereb156 AP2-EREBP-transcription factor 156 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,983,350 145,983,982 Zm00001d016848 GRMZM2G087040 ereb157 AP2-EREBP-transcription factor 157 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 178,257,482 178,258,778 Zm00001d043204 GRMZM2G002119 ereb158 AP2-EREBP-transcription factor 158 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 191,471,796 191,472,356 Zm00001d034605 GRMZM2G009598 ereb159 AP2-EREBP-transcription factor 159 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 297,620,879 297,621,595 Zm00001d017592 GRMZM2G137341 ereb16 AP2-EREBP-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,022,603 201,023,298 Zm00001d045044 GRMZM2G171179 ereb160 AP2-EREBP-transcription factor 160 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 10,942,420 10,945,088 Zm00001d048004 GRMZM2G021573 ereb161 AP2-EREBP-transcription factor 161 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 147,698,120 147,702,310 Zm00001d038907 GRMZM2G059939 ereb162 AP2-EREBP-transcription factor 162 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 166,776,865 166,778,085 Zm00001d024468 GRMZM2G022359 ereb163 AP2-EREBP-transcription factor 163 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 72,229,235 72,232,453 Zm00001d038001 GRMZM2G093595 ereb164 AP2-EREBP-transcription factor 164 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 144,781,755 144,782,501 Zm00001d039019 GRMZM2G317596 ereb165 AP2-EREBP-transcription factor 165 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,819,645 168,820,517 Zm00001d019098 GRMZM2G478965 ereb166 AP2-EREBP-transcription factor 166 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 16,383,295 16,384,383 Zm00001d032095 GRMZM2G050851 ereb167 AP2-EREBP-transcription factor 167 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,364,322 212,366,865 Zm00001d030862 GRMZM2G039112 ereb168 AP2-EREBP-transcription factor 168 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 164,035,614 164,036,858 Zm00001d031498 GRMZM2G016079 ereb169 AP2-EREBP-transcription factor 169 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,005,744 192,006,331 Zm00001d052229 GRMZM2G029323 ereb17 AP2-EREBP-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 183,995,749 183,996,699 Zm00001d051239 GRMZM2G300924 ereb170 AP2-EREBP-transcription factor 170 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 149,655,139 149,656,476 Zm00001d038087 GRMZM2G013657 ereb171 AP2-EREBP-transcription factor 171 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,379,164 147,385,725 Zm00001d031796 GRMZM2G369472 ereb172 AP2-EREBP-transcription factor 172 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 202,103,550 202,104,359 Zm00001d047860 GRMZM2G007406 ereb173 AP2-EREBP-transcription factor 173 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 143,638,759 143,639,535 Zm00001d042717 GRMZM2G149756 ereb174 AP2-EREBP-transcription factor 174 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,106,747 178,109,443 Zm00001d045262 GRMZM2G429378 ereb175 AP2-EREBP-transcription factor 175 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 17,416,763 17,417,710 Zm00001d051355 GRMZM2G072926 ereb176 AP2-EREBP-transcription factor 176 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,723,238 155,723,924 Zm00001d019734 GRMZM2G123119 ereb177 AP2-EREBP-transcription factor 177 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 54,535,486 54,536,259 Zm00001d016623 GRMZM2G047999 ereb178 AP2-EREBP-transcription factor 178 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 170,440,595 170,441,392 Zm00001d027924 GRMZM2G129674 ereb179 AP2-EREBP-transcription factor 179 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,775,779 17,777,344 Zm00001d018081 GRMZM2G055204 ereb18 AP2-EREBP-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 213,912,954 213,913,979 Zm00001d027925 GRMZM2G018984 ereb180 AP2-EREBP-transcription factor 180 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,807,124 17,808,643 Zm00001d027928 AC206951.3_FG016 ereb181 AP2-EREBP-transcription factor 181 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,833,120 17,833,935 Zm00001d027929 AC206951.3_FG017 ereb182 AP2-EREBP-transcription factor 182 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,839,868 17,840,788 Zm00001d007119 GRMZM2G458437 ereb183 AP2-EREBP-transcription factor 183 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 222,724,965 222,725,855 Zm00001d034204 GRMZM2G028151 ereb184 AP2-EREBP-transcription factor 184 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 286,726,372 286,730,435 Zm00001d002747 GRMZM2G028969 ereb185 AP2-EREBP-transcription factor 185 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,380,521 21,381,279 Zm00001d008872 AC187157.4_FG001 ereb186 AP2-EREBP-transcription factor 186 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 23,393,783 23,394,550 Zm00001d018050 GRMZM2G130459 ereb187 AP2-EREBP-transcription factor 187 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 213,161,649 213,165,885 Zm00001d029679 GRMZM2G477287 ereb188 AP2-EREBP-transcription factor 188 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 82,474,257 82,474,886 Zm00001d019744 GRMZM2G060517 ereb189 AP2-EREBP-transcription factor 189 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 55,350,694 55,351,104 Zm00001d036536 GRMZM2G175543 ereb19 AP2-EREBP-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 91,341,686 91,342,279 Zm00001d026486 GRMZM2G104260 ereb190 AP2-EREBP-transcription factor 190 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,894,287 146,895,167 Zm00001d016262 GRMZM2G047918 ereb191 AP2-EREBP-transcription factor 191 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 154,574,992 154,575,720 Zm00001d039989 GRMZM2G129777 ereb192 AP2-EREBP-transcription factor 192 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 21,877,778 21,879,721 Zm00001d040651 GRMZM2G169382 ereb193 AP2-EREBP-transcription factor 193 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 56,282,555 56,283,711 Zm00001d050948 GRMZM2G120401 ereb194 AP2-EREBP-transcription factor 194 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 133,138,782 133,139,666 Zm00001d017462 GRMZM2G466044 ereb195 AP2-EREBP-transcription factor 195 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,589,211 196,590,059 Zm00001d038585 GRMZM2G020150 ereb196 AP2-EREBP-transcription factor 196 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,539,493 160,540,155 Zm00001d002075 GRMZM2G174784 ereb197 AP2-EREBP-transcription factor 197 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 5,456,239 5,459,958 Zm00001d002762 GRMZM2G055180 ereb198 AP2-EREBP-transcription factor 198 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,962,709 21,963,548 Zm00001d032077 GRMZM2G163745 ereb199 AP2-EREBP-transcription factor 199 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 211,750,252 211,750,944 Zm00001d026191 GRMZM2G080516 ereb2 AP2-EREBP-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,619,551 140,620,363 Zm00001d022461 GRMZM2G025062 ereb200 AP2-EREBP-transcription factor 200 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 178,147,095 178,148,306 Zm00001d021892 GRMZM2G384386 ereb201 AP2-EREBP-transcription factor 201 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,528,436 165,529,362 Zm00001d005798 GRMZM2G148333 ereb202 AP2-EREBP-transcription factor 202 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,023,745 189,025,630 Zm00001d046651 GRMZM2G104866 ereb203 AP2-EREBP-transcription factor 203 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 100,458,973 100,459,869 Zm00001d026271 GRMZM2G438202 ereb205 AP2-EREBP-transcription factor 205 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,611,393 142,612,061 Zm00001d017207 GRMZM2G366434 ereb206 AP2-EREBP-transcription factor 206 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,933,076 188,937,726 Zm00001d045120 GRMZM2G156006 ereb207 AP2-EREBP-transcription factor 207 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 13,432,181 13,432,923 Zm00001d044004 GRMZM2G160971 ereb208 AP2-EREBP-transcription factor 208 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 216,213,660 216,214,559 Zm00001d049364 GRMZM2G089995 ereb209 AP2-EREBP-transcription factor 209 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 27,940,728 27,941,339 Zm00001d025409 GRMZM2G175525 ereb21 AP2-EREBP-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 117,748,319 117,749,080 Zm00001d007033 GRMZM2G125460 ereb210 AP2-EREBP-transcription factor 210 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 220,493,755 220,494,609 Zm00001d005892 GRMZM2G138396 ereb211 AP2-EREBP-transcription factor 211 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 191,897,839 191,898,630 Zm00001d026448 GRMZM2G076602 ereb212 AP2-EREBP-transcription factor 212 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,059,085 146,062,110 Zm00001d010048 GRMZM2G006745 ereb22 AP2-EREBP-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 96,823,511 96,826,858 Zm00001d021207 GRMZM2G069126 ereb23 AP2-EREBP-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,034,693 146,035,409 Zm00001d002025 GRMZM2G086573 ereb24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,628,845 4,634,985 Zm00001d036298 GRMZM2G119865 ereb25 AP2-EREBP-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 82,562,696 82,563,229 Zm00001d028919 GRMZM2G317160 ereb26 AP2-EREBP-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 51,465,066 51,470,982 Zm00001d037165 GRMZM2G084264 ereb27 AP2-EREBP-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 114,596,733 114,597,452 Zm00001d023535 GRMZM2G544539 ereb28 AP2-EREBP-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,153,462 9,156,390 Zm00001d012584 GRMZM2G132223 ereb29 AP2-EREBP-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 176,883,525 176,884,022 Zm00001d017477 GRMZM5G842961 ereb30 AP2-EREBP-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 197,146,884 197,147,717 Zm00001d044857 GRMZM5G852704 ereb31 AP2-EREBP-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 5,518,177 5,519,226 Zm00001d050787 GRMZM2G139740 ereb32 AP2-EREBP-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 122,810,261 122,810,842 Zm00001d045378 GRMZM2G073982 ereb33 AP2-EREBP-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,099,934 20,101,949 Zm00001d039077 GRMZM5G846057 ereb34 AP2-EREBP-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 169,626,430 169,627,293 Zm00001d028070 GRMZM2G415251 ereb35 AP2-EREBP-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,975,168 21,977,063 Zm00001d021205 GRMZM2G069082 ereb36 AP2-EREBP-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,027,044 146,027,784 Zm00001d015305 GRMZM2G322672 ereb37 AP2-EREBP-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 83,928,232 83,928,795 Zm00001d027870 GRMZM2G419901 ereb38 AP2-EREBP-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,005,938 16,006,903 Zm00001d046292 GRMZM2G073047 ereb39 AP2-EREBP-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 78,537,231 78,537,959 Zm00001d028524 GRMZM2G015281 ereb4 AP2-EREBP-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 38,080,422 38,081,126 GRMZM2G164591 ereb40 AP2-EREBP-transcription factor 40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,788,916 146,790,031 Zm00001d007840 GRMZM2G146688 ereb41 AP2-EREBP-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 240,624,534 240,627,667 Zm00001d038584 GRMZM2G020016 ereb42 AP2-EREBP-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,527,296 160,527,928 Zm00001d007236 GRMZM2G399598 ereb43 AP2-EREBP-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 225,397,842 225,399,820 Zm00001d029884 GRMZM5G806839 ereb44 AP2-EREBP-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 91,990,667 91,991,467 Zm00001d002011 GRMZM2G067463 ereb45 AP2-EREBP-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,324,615 4,325,127 Zm00001d015759 GRMZM2G085678 ereb46 AP2-EREBP-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 116,972,852 116,973,938 Zm00001d002079 GRMZM2G174917 ereb47 AP2-EREBP-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 5,505,054 5,505,812 Zm00001d048296 GRMZM2G376255 ereb48 AP2-EREBP-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,056,208 154,057,131 Zm00001d009468 GRMZM2G159592 ereb49 AP2-EREBP-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 65,782,410 65,783,537 Zm00001d051350 GRMZM2G048621 ereb5 AP2-EREBP-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,610,012 155,610,749 Zm00001d039324 GRMZM2G142179 ereb50 AP2-EREBP-transcription factor 50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,876,337 1,877,401 Zm00001d024436 GRMZM2G055070 ereb51 AP2-EREBP-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 70,790,076 70,790,636 Zm00001d042588 GRMZM2G105266 ereb52 AP2-EREBP-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 172,856,158 172,857,057 Zm00001d042492 GRMZM2G141638 ereb53 AP2-EREBP-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 169,433,935 169,438,362 Zm00001d024324 GRMZM2G020054 ereb54 AP2-EREBP-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 64,620,725 64,621,285 Zm00001d052102 GRMZM2G097081 ereb57 AP2-EREBP-transcription factor 57 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 179,564,558 179,565,262 Zm00001d034920 GRMZM2G381441 ereb58 AP2-EREBP-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 305,637,480 305,638,337 Zm00001d049058 GRMZM5G837876 ereb59 AP2-EREBP-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 14,139,093 14,139,833 Zm00001d002744 GRMZM2G172936 ereb6 AP2-EREBP-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,315,391 21,316,053 Zm00001d032144 GRMZM2G131266 ereb60 AP2-EREBP-transcription factor 60 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 214,378,154 214,380,573 Zm00001d002760 GRMZM2G475678 ereb61 AP2-EREBP-transcription factor 61 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,850,071 21,851,141 Zm00001d006653 GRMZM2G011236 ereb62 AP2-EREBP-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,547,650 213,548,585 Zm00001d042593 GRMZM2G307152 ereb63 AP2-EREBP-transcription factor 63 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 173,057,147 173,057,683 Zm00001d019216 GRMZM2G171569 ereb64 AP2-EREBP-transcription factor 64 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 22,130,022 22,130,944 Zm00001d006170 GRMZM2G124011 ereb65 AP2-EREBP-transcription factor 65 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 200,403,153 200,403,895 Zm00001d017478 GRMZM2G041839 ereb66 AP2-EREBP-transcription factor 66 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 197,222,832 197,223,605 Zm00001d047339 GRMZM2G114820 ereb67 AP2-EREBP-transcription factor 67 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 126,963,041 126,964,782 Zm00001d002620 GRMZM2G368838 ereb68 AP2-EREBP-transcription factor 68 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 16,974,028 16,974,666 Zm00001d037941 GRMZM2G085964 ereb69 AP2-EREBP-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 142,909,977 142,911,255 Zm00001d052167 GRMZM2G173771 ereb7 AP2-EREBP-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 181,560,436 181,561,128 Zm00001d049309 AC213666.3_FG003 ereb70 AP2-EREBP-transcription factor 70 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 25,775,470 25,775,961 Zm00001d048208 GRMZM2G113060 ereb71 AP2-EREBP-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,517,945 152,518,838 Zm00001d035835 GRMZM2G135452 ereb72 AP2-EREBP-transcription factor 72 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 54,257,239 54,258,228 GRMZM2G060876 ereb73 AP2-EREBP-transcription factor 73 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,849,278 165,850,111 Zm00001d014113 GRMZM2G024871 ereb74 AP2-EREBP-transcription factor 74 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 32,981,437 32,981,850 GRMZM2G060249 ereb75 AP2-EREBP-transcription factor 75 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,822,785 165,823,252 Zm00001d017366 GRMZM2G139765 ereb76 AP2-EREBP-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 193,684,947 193,686,296 Zm00001d043116 GRMZM2G451031 ereb77 AP2-EREBP-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 189,581,664 189,585,104 Zm00001d049903 GRMZM2G060206 ereb78 AP2-EREBP-transcription factor 78 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 51,462,096 51,462,470 Zm00001d031728 GRMZM2G175856 ereb79 AP2-EREBP-transcription factor 79 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,720,829 199,721,512 Zm00001d053707 GRMZM2G146028 ereb8 AP2-EREBP-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,645,670 239,646,296 Zm00001d011499 GRMZM2G151542 ereb80 AP2-EREBP-transcription factor 80 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 152,569,157 152,570,068 Zm00001d035512 GRMZM2G416701 ereb81 AP2-EREBP-transcription factor 81 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 30,481,710 30,486,777 Zm00001d019116 GRMZM2G019443 ereb82 AP2-EREBP-transcription factor 82 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 17,758,679 17,759,647 Zm00001d012585 GRMZM2G132185 ereb83 AP2-EREBP-transcription factor 83 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 176,892,933 176,893,658 Zm00001d038216 GRMZM2G481668 ereb84 AP2-EREBP-transcription factor 84 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,806,188 151,806,748 Zm00001d025910 GRMZM2G040664 ereb86 AP2-EREBP-transcription factor 86 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 133,559,160 133,560,374 Zm00001d002761 GRMZM5G805505 ereb87 AP2-EREBP-transcription factor 87 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,893,444 21,894,391 Zm00001d021214 GRMZM2G018138 ereb88 AP2-EREBP-transcription factor 88 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,343,053 146,343,709 Zm00001d049889 GRMZM2G156737 ereb89 AP2-EREBP-transcription factor 89 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 50,775,492 50,776,550 Zm00001d037531 GRMZM2G323172 ereb9 AP2-EREBP-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 128,390,186 128,395,804 Zm00001d018305 GRMZM2G110333 ereb90 AP2-EREBP-transcription factor 90 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 218,213,866 218,216,075 Zm00001d003871 GRMZM2G079825 ereb91 AP2-EREBP-transcription factor 91 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 64,226,755 64,227,570 Zm00001d000339 GRMZM2G174347 ereb92 AP2-EREBP-transcription factor 92 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg23 49,432 50,133 Zm00001d010676 GRMZM2G066158 ereb93 AP2-EREBP-transcription factor 93 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 123,949,136 123,949,753 Zm00001d020043 GRMZM2G363052 ereb94 AP2-EREBP-transcription factor 94 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 88,466,229 88,469,073 Zm00001d027687 AC198979.4_FG009 ereb95 AP2-EREBP-transcription factor 95 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 11,155,935 11,156,159 Zm00001d008968 GRMZM2G044077 ereb96 AP2-EREBP-transcription factor 96 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 27,760,205 27,761,182 Zm00001d002364 GRMZM2G068967 ereb97 AP2-EREBP-transcription factor 97 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 10,906,553 10,907,221 Zm00001d053859 GRMZM2G052720 ereb98 AP2-EREBP-transcription factor 98 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 242,396,086 242,396,676 Zm00001d049058 GRMZM2G073258 ereb99 AP2-EREBP-transcription factor 99 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 14,139,093 14,139,833 Zm00001d013486 GRMZM2G102601 ers14 ethylene receptor1-14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,646,141 12,651,335 Zm00001d033642 GRMZM2G073668 ers25 ethylene receptor1-25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,395,044 269,400,163 Zm00001d047398 GRMZM2G012012 es1 embryo sac1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment with cDNA AF180131 GI:12830540 (MS Ap3 2011) Chr9 128,745,208 128,745,486 Zm00001d047372 GRMZM2G128301 es2 embryo sac2 Gene model association inferred from similarity with B73 RefGen_v3 gene models based on cDNA AF180132 GI:12830542 Chr9 128,017,173 128,017,448 Zm00001d047372 GRMZM2G128301 es3 embryo sac3 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of cDNA AF180132 GI:12830542 Chr9 128,017,173 128,017,448 Zm00001d047372 GRMZM2G009359 es4 embryo sac4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of A188 cDNA AF180134.1 GI:12830546 Chr9 128,017,173 128,017,448 Zm00001d037988 AC233879.1_FG002 esp1 embryo specific protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X55388 Chr6 144,427,562 144,428,509 Zm00001d037985 GRMZM2G162659 esp5 embryo specific protein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 144,391,967 144,392,983 Zm00001d027820 GRMZM2G046086 esr1 embryo surrounding region1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,479,050 14,479,445 Zm00001d027819 GRMZM2G315601 esr2 embryo surrounding region2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,448,014 14,448,412 Zm00001d027821 GRMZM2G140302 esr3 embryo surrounding region3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X99970 Chr1 14,492,187 14,492,564 Zm00001d053112 GRMZM2G048353 esr6 embryo surrounding region6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 214,258,440 214,258,980 Zm00001d044415 GRMZM2G157574 et1 etched1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 227,490,616 227,495,187 Zm00001d025050 GRMZM2G420801 etr2 ethylene receptor homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 101,678,128 101,682,933 Zm00001d004372 GRMZM2G089010 etr40 ethylene receptor homolog40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 106,904,147 106,908,784 Zm00001d034015 GRMZM2G147687 exg1 exoglucanase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100191390 Chr1 281,226,728 281,232,212 Zm00001d043047 GRMZM2G339122 expa1 alpha expansin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 187,342,506 187,347,984 Zm00001d018031 GRMZM2G105844 expa2 alpha expansin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,483,686 212,485,307 Zm00001d025018 GRMZM2G074585 expa3 alpha expansin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 99,917,607 99,918,841 Zm00001d034663 GRMZM2G368886 expa4 alpha-expansin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 299,194,181 299,196,764 Zm00001d038476 GRMZM2G361064 expa5 alpha expansin5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 158,313,985 158,316,132 Zm00001d027520 GRMZM2G095968 expa6 expansin-like6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,356,309 7,358,599 Zm00001d047146 GRMZM2G146551 expb1 beta expansin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY197353 Chr9 120,060,911 120,062,380 Zm00001d048384 GRMZM2G089699 expb10a beta expansin10a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,293,350 155,294,431 Zm00001d040609 GRMZM2G007685 expb10c beta expansin10c Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY104999 (chr 3 hit) Chr3 53,438,352 53,439,161 Zm00001d040608 GRMZM2G164785 expb10d beta expansin10d Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ525684 Chr3 53,284,329 53,285,135 Zm00001d017733 GRMZM2G127106 expb11 beta expansin11 from: EU961014 Chr5 205,534,901 205,535,713 Zm00001d029899 GRMZM2G021621 expb2 beta expansin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 93,193,094 93,195,786 Zm00001d027283 GRMZM2G474194 expb3 beta expansin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 1,715,993 1,716,949 Zm00001d019560 GRMZM2G154178 expb4 beta expansin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 42,572,171 42,573,747 Zm00001d047089 GRMZM2G013671 expb5 beta expansin5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 118,067,914 118,069,999 Zm00001d029913 GRMZM2G176595 expb6 beta expansin6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 93,847,218 93,848,525 Zm00001d029906 GRMZM2G342246 expb7 beta expansin7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (Oct 2013) Chr1 93,520,069 93,521,826 Zm00001d047087 GRMZM2G013002 expb8 beta expansin8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF332181 Chr9 118,041,045 118,043,785 Zm00001d025201 GRMZM2G099696 fab1 fatty acid biosynthesis1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT040366 Chr10 108,840,806 108,848,622 Zm00001d047743 GRMZM2G128971 fad7 fatty acid desaturase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: D63952 Chr9 140,447,306 140,450,284 Zm00001d028742 GRMZM2G074401 fad8 fatty acid desaturase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: D63953 Chr1 44,975,070 44,978,277 Zm00001d046444 GRMZM2G022558 fae2 fatty acid elongase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ292770 Chr9 90,216,733 90,219,166 Zm00001d032467 AC210173.4_FG005 fah1 ferulic acid 5-hydroxylase1 Chr1 227,648,295 227,649,464 Zm00001d013862 GRMZM2G100158 fah2 ferulic acid 5-hydroxylase2 Chr5 23,180,469 23,183,875 Zm00001d028472 GRMZM2G001663 farl1 FAR1-like-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 35,965,499 35,970,651 Zm00001d021545 GRMZM2G406651 farl10 FAR1-like-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 155,507,985 155,512,108 Zm00001d021617 GRMZM2G048987 farl11 FAR1-like-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 158,166,110 158,171,728 Zm00001d021799 GRMZM2G129311 farl12 FAR1-like-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 163,131,766 163,135,920 Zm00001d022142 GRMZM2G114461 farl13 FAR1-like-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 171,061,547 171,066,128 Zm00001d046441 GRMZM2G148940 farl14 FAR1-like-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 89,992,407 89,995,226 Zm00001d026485 GRMZM2G104268 farl15 FAR1-like-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,872,939 146,890,622 Zm00001d034282 GRMZM2G463730 farl2 FAR1-like-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,419,713 288,426,810 Zm00001d034813 GRMZM2G155980 farl3 FAR1-like-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 302,791,729 302,795,556 Zm00001d039612 GRMZM2G083374 farl4 FAR1-like-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,050,686 9,081,730 Zm00001d041923 GRMZM2G034868 farl5 FAR1-like-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 143,812,482 143,817,371 Zm00001d049493 GRMZM2G302323 farl6 FAR1-like-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 32,339,623 32,342,172 Zm00001d016772 GRMZM2G043250 farl7 FAR1-like-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,546,931 175,549,078 Zm00001d017164 GRMZM2G117108 farl8 FAR1-like-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 187,386,561 187,393,392 Zm00001d017165 GRMZM2G106653 farl9 FAR1-like-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 187,559,811 187,568,783 Zm00001d046454 GRMZM2G406603 fat1 fatty acyl thioesterase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 90,618,251 90,622,738 Zm00001d045387 GRMZM5G829544 fat2 fatty acyl-ACP thioesterase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Li et al 2011 Chr9 20,378,245 20,382,973 Zm00001d030074 GRMZM2G003318 fbn1 fibrillin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 103,634,381 103,637,965 Zm00001d045205 GRMZM2G481291 fbxl1 F-box domain and LRR containing protein1 Chr9 16,041,474 16,043,191 Zm00001d003320 GRMZM2G165836 fcp1 fon2-like cle protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al. 2016 Chr2 40,126,366 40,127,328 Zm00001d043098 GRMZM2G133213 fcr1 ferric-chelate reductase (NADH)1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 189,164,370 189,168,123 Zm00001d038529 GRMZM2G157263 fcr2 ferric-chelate reductase (NADH)2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,350,688 159,355,063 Zm00001d045555 GRMZM5G847530 fdad1 false DAD1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT041642 Chr9 26,647,373 26,649,610 Zm00001d018468 GRMZM5G824600 fdh1 formaldehyde dehydrogenase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 221,346,595 221,353,674 Zm00001d045965 GRMZM2G049811 fdh2 formate dehydrogenase2 Chr9 50,417,671 50,421,825 Zm00001d022227 GRMZM2G056407 fdl1 fused leaves1 Gene model association inferred from similarity with B73 RefGen_v3 gene models La Rocca et al., 2015 Chr7 173,165,811 173,167,796 Zm00001d035001 GRMZM2G122337 fdx1 ferredoxin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 1,392,078 1,392,530 Zm00001d035003 GRMZM2G048313 fdx2 ferredoxin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 1,425,009 1,425,431 Zm00001d034760 GRMZM2G053458 fdx3 ferredoxin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 301,511,660 301,512,118 Zm00001d035002 GRMZM2G122327 fdx5 ferredoxin5 Chr6 1,395,899 1,396,315 Zm00001d038291 GRMZM2G106190 fdx6 ferredoxin6 Chr6 153,560,369 153,560,833 Zm00001d051012 GRMZM2G104925 fea2 fasciated ear2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 136,765,871 136,767,712 Zm00001d040130 GRMZM2G166524 fea3 fasciated ear3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr3 28,711,131 28,713,722 Zm00001d037317 GRMZM2G133331 fea4 fasciated ear4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 120,724,112 120,726,773 Zm00001d038855 GRMZM2G121262 fen1 flap endonuclease1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 165,902,624 165,906,657 Zm00001d052316 GRMZM2G325575 fer1 ferritin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 186,976,119 186,978,547 Zm00001d023225 GRMZM2G147266 fer2 ferritin homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 826,372 828,398 Zm00001d032529 GRMZM5G869779 fgp2 folylpolyglutamate synthetase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li, et al. 2014 Chr1 229,632,719 229,640,091 Zm00001d022388 GRMZM2G036609 fgs1 ferredoxin-dependent glutamate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 176,589,186 176,606,869 Zm00001d027462 GRMZM2G129243 fha1 FHA-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,819,752 5,825,029 Zm00001d049225 AC211652.4_FG002 fha10 FHA-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 21,651,502 21,656,668 Zm00001d013060 GRMZM2G701297 fha11 FHA-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,053,398 4,061,564 Zm00001d013342 GRMZM2G105822 fha12 FHA-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 8,966,512 8,968,095 Zm00001d013765 GRMZM2G081221 fha13 FHA-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,660,256 19,664,911 Zm00001d013976 GRMZM2G006246 fha14 FHA-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 26,945,788 26,950,335 Zm00001d037971 GRMZM2G113156 fha15 FHA-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 143,885,595 143,894,219 Zm00001d048454 GRMZM2G172021 fha17 FHA-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 156,673,659 156,679,530 Zm00001d025545 GRMZM2G136344 fha18 FHA-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 121,846,235 121,850,530 Zm00001d031593 GRMZM2G424241 fha2 FHA-transcription factor 2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,672,265 195,678,558 Zm00001d033153 GRMZM2G086138 fha3 FHA-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,246,763 252,255,194 Zm00001d033884 GRMZM2G359217 fha4 FHA-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 277,357,877 277,359,445 Zm00001d004810 GRMZM2G133716 fha6 FHA-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 140,744,018 140,750,309 Zm00001d005240 GRMZM2G150608 fha7 FHA-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 165,391,566 165,398,971 Zm00001d007652 GRMZM2G391164 fha8 FHA-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 236,954,507 236,959,237 Zm00001d044666 GRMZM2G177895 fha9 FHA-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 234,416,397 234,417,575 Zm00001d001960 GRMZM2G062396 fht1 flavanone 3-hydroxylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 3,559,183 3,560,951 Zm00001d029218 GRMZM2G703582 fht2 flavanone 3-hydroxylase2 v4 v3 position distinct from GRMZM2G382569; v4 location is merged Chr1 62,747,068 62,748,525 Zm00001d049608 GRMZM2G118205 fie1 fertilization independent endosperm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 37,421,922 37,427,789 Zm00001d024698 GRMZM2G148924 fie2 fertilization independent endosperm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 83,962,005 83,966,353 Zm00001d051688 GRMZM2G010937 fim1 fimbrin homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project Chr4 166,783,445 166,789,500 Zm00001d007445 GRMZM2G107945 fkf1 flavin-binding kelch repeat f-box1 Chr2 231,913,591 231,917,937 Zm00001d053091 GRMZM2G106363 fkf2 flavin-binding kelch repeat f-box2 Chr4 213,273,271 213,276,371 Zm00001d003398 GRMZM2G094532 fl1 floury endosperm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of EF536720 to B73_v2 assembly Chr2 43,019,871 43,020,779 Zm00001d049243 GRMZM2G397687 fl2 floury2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 22,579,361 22,580,152 Zm00001d009292 GRMZM2G006585 fl3 floury3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017; assigned by the Grassius project to platz12 (Yilmaz et al 2009) Chr8 52,707,946 52,709,109 Zm00001d048851 GRMZM2G353272 fl4 floury4 Gene model association inferred from similarity with B73 RefGen_v3 gene models From: Wang et al., 2014 (one member of tandem repeated 19kD alpha zein z1A-1 gene cluster) Chr4 6,353,980 6,354,684 Zm00001d018184 GRMZM2G152801 fls1 flavonol synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Falcone-Ferreyra et al., 2012 Chr5 215,975,576 215,976,694 Zm00001d018181 GRMZM2G069298 fls2 flavonol synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Falcone-Ferreyra et al., 2012 Chr5 215,925,493 215,926,588 Zm00001d034345 GRMZM2G058760 fnr1 ferredoxin NADP reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 290,272,584 290,276,056 Zm00001d018794 GRMZM2G011858 fnr2 ferredoxin NADP reductase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 5,353,809 5,359,209 Zm00001d047452 GRMZM2G167336 fns1 flavone synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Rius et al., 2016 Chr9 130,652,403 130,653,974 Zm00001d029744 GRMZM2G099467 fnsi1 flavone synthase typeI1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Falcone Ferreyra et al., 2015 Chr1 85,068,069 85,072,051 Zm00001d027423 GRMZM2G475380 fnsi2 flavone synthase typeI2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Falcone Ferreyra et al., 2015 Chr1 4,909,652 4,914,685 Zm00001d024946 GRMZM2G148441 fnsii1 flavone synthase typeII1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Morohashi et al., 2012 Chr10 96,325,810 96,327,827 Zm00001d008325 GRMZM2G134941 fpf1 flowering-promoting factor1 Chr8 5,225,241 5,225,564 Zm00001d022148 GRMZM2G108767 fpox1 fowlpox viral protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,253,896 171,257,994 Zm00001d009431 GRMZM2G168681 fps1 farnesyl pyrophosphate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 64,107,616 64,111,865 Zm00001d011673 GRMZM2G147721 fps2 farnesyl diphosphate synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Richter et al 2015 Chr8 158,269,867 158,274,000 Zm00001d043727 GRMZM2G098569 fps3 farnesyl diphosphate synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Richter et al 2015 Chr3 208,452,423 208,456,825 Zm00001d042536 GRMZM2G086845 frk1 fructokinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 171,065,302 171,068,300 Zm00001d035037 GRMZM2G051677 frk2 fructokinase2 Chr6 2,749,867 2,752,420 Zm00001d003559 GRMZM2G068557 fro2 ferric-chelate reductase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 48,066,763 48,071,352 Zm00001d027500 GRMZM2G392863 fsgt1 flower-specific gamma-thionin1 Chr1 6,797,799 6,798,604 Zm00001d023534 GRMZM2G001904 ftcl1 5-formyltetrahydrofolate cyclo-ligase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guan et al., 2014 Chr10 9,078,177 9,084,700 Zm00001d047424 ftfh1 flavonoid 3,5-hydroxylase1 Chr9 129,619,898 129,624,238 Zm00001d045366 GRMZM2G122793 ftr1 ferredoxin-thioredoxin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 19,826,408 19,831,154 Zm00001d027359 GRMZM2G062210 fus6 fusca homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,651,033 3,661,251 Zm00001d039260 GRMZM2G087804 g2 golden plant2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 750,258 754,984 Zm00001d038511 GRMZM2G167673 ga16,17ox1 gibberellin 16,17-oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen, et al. (2012) Chr6 158,957,756 158,969,636 Zm00001d034898 AC203966.5_FG005 ga20ox1 gibberellin 20-oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001112453 Chr1 305,074,531 305,075,830 Zm00001d007894 GRMZM2G021051 ga20ox2 gibberellin 20-oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001143386 Chr2 241,897,454 241,898,638 Zm00001d042611 GRMZM2G368411 ga20ox3 gibberellin 20-oxidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen, et al. (2012) Chr3 173,559,174 173,562,022 Zm00001d013725 GRMZM2G060940 ga20ox4 gibberellin 20-oxidase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001156071 Chr5 18,631,981 18,633,840 Zm00001d012212 GRMZM2G049418 ga20ox5 gibberellin 20-oxidase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen, et al. (2012) Chr8 170,115,789 170,118,570 Zm00001d037565 GRMZM2G078798 ga2ox1 gibberellin 2-oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Bolduc et al 2012 Chr6 129,802,297 129,807,428 Zm00001d012712 GRMZM2G031724 ga2ox10 gibberellin 2-oxidase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen, et al. (2012) Chr8 179,086,672 179,088,998 GRMZM2G127757 ga2ox11 gibberellin 2-oxidase11 Nelissen, et al. (2012) Chr6 158,703,759 158,705,083 Zm00001d018617 GRMZM2G177104 ga2ox12 gibberellin 2-oxidase12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen, et al. (2012) Chr7 1,105,512 1,106,576 Zm00001d039394 GRMZM2G031432 ga2ox13 gibberellin 2-oxidase13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen, et al. (2012) Chr3 3,274,307 3,276,532 Zm00001d002999 GRMZM2G006964 ga2ox2 gibberellin 2-oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001154780 Chr2 29,175,293 29,178,113 Zm00001d043411 GRMZM2G022679 ga2ox3 gibberellin 2-oxidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: FL100324 Chr3 199,019,233 199,021,284 Zm00001d017294 GRMZM2G153359 ga2ox4 gibberellin 2-oxidase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EC858802 Chr5 192,007,580 192,011,428 Zm00001d040737 GRMZM2G176963 ga2ox5 gibberellin 2-oxidase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen, et al. (2012) Chr3 60,952,847 60,960,982 Zm00001d037724 GRMZM2G051619 ga2ox6 gibberellin 2-oxidase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 135,240,118 135,243,717 Zm00001d038695 GRMZM2G427618 ga2ox7 gibberellin 2-oxidase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001154796 Chr6 162,656,616 162,658,442 Zm00001d038996 GRMZM2G155686 ga2ox8 gibberellin 2-oxidase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001137734 Chr6 168,446,326 168,448,293 Zm00001d008909 GRMZM2G152354 ga2ox9 gibberellin 2-oxidase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001157265 Chr8 24,852,743 24,855,080 Zm00001d037627 GRMZM2G044358 ga3ox1 gibberellin 3-oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: JX307639 Chr6 132,317,697 132,319,277 Zm00001d033174 GRMZM2G073725 gap1 Golgi associated protein homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U89897 Chr1 252,797,116 252,799,804 Zm00001d044254 GRMZM2G061695 gar1 gibberellin responsive1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 223,085,735 223,089,594 Zm00001d026160 GRMZM2G429000 gar2 gibberellin responsive2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU952874 Chr10 140,066,627 140,067,028 Zm00001d011225 GRMZM2G142705 gar3 gibberellin responsive3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AB018589 Chr8 143,689,328 143,691,031 Zm00001d005005 GRMZM2G025002 gata1 C2C2-GATA-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 153,300,918 153,302,288 Zm00001d048391 GRMZM2G532534 gata10 C2C2-GATA-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 155,410,694 155,411,701 Zm00001d002811 GRMZM2G404973 gata11 C2C2-GATA-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,362,233 23,364,607 Zm00001d037605 AC194965.4_FG004 gata12 C2C2-GATA-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 131,419,763 131,421,563 Zm00001d012757 GRMZM2G044576 gata13 C2C2-GATA-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 180,032,642 180,034,434 Zm00001d053949 GRMZM5G879778 gata14 C2C2-GATA-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 244,127,654 244,131,267 Zm00001d016361 GRMZM2G031983 gata15 C2C2-GATA-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 159,219,012 159,221,123 Zm00001d029896 GRMZM2G113098 gata16 C2C2-GATA-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 92,897,029 92,898,887 Zm00001d011771 GRMZM2G138967 gata17 C2C2-GATA-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 161,288,497 161,289,891 Zm00001d034751 GRMZM2G114775 gata18 C2C2-GATA-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 301,301,000 301,302,433 Zm00001d025988 GRMZM2G421212 gata19 C2C2-GATA-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,344,276 135,347,905 Zm00001d009193 GRMZM2G104390 gata2 C2C2-GATA-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 42,033,253 42,035,233 Zm00001d009604 GRMZM5G887975 gata21 C2C2-GATA-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 72,785,057 72,785,843 Zm00001d053940 AC184831.3_FG005 gata22 C2C2-GATA-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 243,894,205 243,896,498 Zm00001d034386 GRMZM2G110295 gata23 C2C2-GATA-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 291,553,608 291,555,291 Zm00001d018421 GRMZM2G163200 gata24 C2C2-GATA-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 220,398,106 220,404,278 Zm00001d038801 AC202864.3_FG002 gata25 C2C2-GATA-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,734,361 164,736,397 Zm00001d009668 GRMZM2G397616 gata26 C2C2-GATA-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 75,139,891 75,141,593 Zm00001d040775 GRMZM2G052616 gata27 C2C2-GATA-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 64,946,021 64,948,546 Zm00001d047081 GRMZM2G101058 gata28 C2C2-GATA-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 117,752,835 117,754,586 Zm00001d046354 GRMZM2G039586 gata29 C2C2-GATA-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 83,394,090 83,396,208 Zm00001d017409 GRMZM2G140669 gata3 C2C2-GATA-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 195,097,522 195,099,545 Zm00001d052431 GRMZM2G464037 gata30 C2C2-GATA-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 189,828,211 189,829,629 Zm00001d041883 GRMZM2G067171 gata31 C2C2-GATA-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 142,276,945 142,278,755 Zm00001d010785 GRMZM2G135381 gata32 C2C2-GATA-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 127,752,529 127,754,303 Zm00001d023540 GRMZM2G048850 gata33 C2C2-GATA-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,446,733 9,447,398 Zm00001d033945 GRMZM2G396451 gata34 C2C2-GATA-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 279,348,660 279,365,014 Zm00001d043969 GRMZM2G123909 gata35 C2C2-GATA-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 215,346,971 215,347,825 AC184831.3_FG008 gata36 C2C2-GATA-transcription factor 36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,100,691 239,101,536 Zm00001d051981 GRMZM2G379005 gata4 C2C2-GATA-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,840,987 175,846,170 Zm00001d002790 GRMZM2G077002 gata5 C2C2-GATA-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,704,567 22,708,332 Zm00001d025953 GRMZM2G054615 gata6 C2C2-GATA-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,612,927 134,615,457 Zm00001d023539 GRMZM2G118214 gata7 C2C2-GATA-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,373,447 9,375,293 Zm00001d023541 GRMZM2G324131 gata8 C2C2-GATA-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,501,110 9,503,125 Zm00001d031135 GRMZM2G009530 gata9 C2C2-GATA-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 179,005,355 179,009,556 Zm00001d039065 GRMZM2G011932 gbf1 G-box binding factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) to bzip18 Chr6 169,491,185 169,496,107 Zm00001d034949 GRMZM2G131939 gbp1 GTP-binding protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 306,490,318 306,502,810 Zm00001d033422 GRMZM2G045314 gbp2 GTP binding protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,592,398 262,598,732 Zm00001d035224 GRMZM2G392516 gbptf1 GeBP-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 14,927,596 14,930,694 Zm00001d037158 GRMZM2G008558 gbptf10 GeBP-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 114,233,341 114,234,231 Zm00001d024905 GRMZM2G006871 gbptf11 GeBP-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 94,232,837 94,233,649 Zm00001d022266 GRMZM2G082318 gbptf12 GeBP-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,958,884 173,960,008 Zm00001d035295 GRMZM2G155252 gbptf13 GeBP-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 19,729,794 19,731,113 Zm00001d053298 GRMZM2G125239 gbptf14 GeBP-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 224,897,414 224,899,075 Zm00001d035234 GRMZM2G036966 gbptf15 GeBP-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 15,908,223 15,911,138 Zm00001d018198 GRMZM2G174240 gbptf16 GeBP-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 216,319,722 216,320,618 Zm00001d018208 GRMZM2G083886 gbptf17 GeBP-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 216,608,861 216,609,928 Zm00001d029287 GRMZM2G026417 gbptf18 GeBP-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 64,853,687 64,854,838 Zm00001d013138 GRMZM5G868875 gbptf19 GeBP-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,339,098 5,339,871 GRMZM2G065506 gbptf2 GeBP-transcription factor 2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 131,400,636 131,401,747 Zm00001d049991 GRMZM2G423292 gbptf20 GeBP-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 58,070,649 58,072,019 Zm00001d040254 EF517601.1_FG010 gbptf21 GeBP-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 34,201,668 34,202,867 Zm00001d033706 GRMZM2G041818 gbptf3 GeBP-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 271,804,516 271,808,051 Zm00001d044953 GRMZM2G066373 gbptf4 GeBP-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 8,154,859 8,155,761 Zm00001d013451 GRMZM2G162405 gbptf5 GeBP-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 11,953,659 11,957,891 Zm00001d006945 GRMZM2G075122 gbptf6 GeBP-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 219,975,248 219,976,357 Zm00001d020688 GRMZM2G092409 gbptf7 GeBP-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 128,444,311 128,445,856 Zm00001d005865 GRMZM2G134866 gbptf8 GeBP-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 191,165,955 191,167,271 Zm00001d047421 GRMZM2G030458 gbptf9 GeBP-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 129,533,221 129,534,348 Zm00001d019479 GRMZM2G008263 gbss1b granule-bound starch synthase1b Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EF471312 Chr7 36,171,251 36,178,389 Zm00001d006177 GRMZM2G412911 gcs1 generative cell specific1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 200,734,879 200,745,262 Zm00001d023699 GRMZM2G399183 gcsh1 glycine cleavage system protein H1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,081,385 16,082,904 Zm00001d023437 GRMZM2G104310 gdcp1 glycine decarboxylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,599,455 5,606,101 Zm00001d034420 GRMZM2G178415 gdh1 glutamic dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 292,477,033 292,483,300 Zm00001d025984 GRMZM2G427097 gdh2 glutamic dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 135,302,916 135,307,138 Zm00001d042143 GRMZM2G065585 geb1 glucan endo-1,3-beta-glucosidase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Christensen et al., 2015 Chr3 153,385,868 153,387,244 Zm00001d033423 GRMZM2G046101 geb7 glucan endo-1,3-beta-glucosidase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,653,205 262,655,634 Zm00001d044646 GRMZM2G005849 gfa1 glucosamine fructose-6-phosphate aminotransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT036425 Chr3 233,922,381 233,938,435 Zm00001d015211 GRMZM2G015578 gg1 G-protein gamma subunit1 Chr5 79,551,939 79,555,712 Zm00001d033287 GRMZM6G935329 gg2 G-protein gamma subunit2 Chr1 257,636,497 257,639,583 Zm00001d018034 GRMZM2G105644 ggh1 geranylgeranyl hydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr5 212,543,656 212,546,035 Zm00001d040356 GRMZM2G419111 ggh2 geranylgeranyl hydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr3 39,647,289 39,648,626 Zm00001d006678 AC194970.5_FG001 ggps1 geranylgeranyl pyrophosphate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence Chr2 214,097,373 214,099,059 Zm00001d021929 GRMZM2G102550 ggps2 geranylgeranyl pyrophosphate synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence Chr7 166,016,446 166,018,185 Zm00001d008370 GRMZM2G058404 ggps3 geranylgeranyl pyrophosphate synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence Chr8 6,617,307 6,618,398 Zm00001d017540 GRMZM2G005909 ggps4 geranylgeranyl pyrophosphate synthase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence Chr5 199,061,996 199,063,027 Zm00001d039856 GRMZM2G451327 ggt1 geranylgeranyl transferase1 Chr3 16,786,916 16,799,630 Zm00001d008826 GRMZM2G107101 gi1 gigantea1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Frank Harmon, pers comm Chr8 21,787,238 21,795,721 Zm00001d039589 GRMZM5G844173 gi2 gigantea2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Frank Harmon, pers comm Chr3 8,521,898 8,533,430 Zm00001d033905 GRMZM2G180246 gif1 growth-regulating-factor-interacting factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen et al., 2015 Chr1 278,134,999 278,138,569 Zm00001d048833 GRMZM2G154169 gif2 growth-regulating-factor-inteacting factor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 6,134,868 6,138,876 Zm00001d023767 gif3 growth-regulating-factor-inteacting factor3 v4 Chr10 19,457,326 19,463,711 Zm00001d020557 GRMZM2G114642 gl1 glossy1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 122,228,805 122,234,943 Zm00001d039631 GRMZM2G118243 gl13 glossy13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2013 Chr3 9,567,326 9,577,428 Zm00001d004198 GRMZM5G806387 gl14 glossy14 Zheng et al., 2018 Chr2 91,038,189 91,040,615 Zm00001d046621 GRMZM2G160730 gl15 glossy15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 99,138,564 99,141,663 Zm00001d002353 GRMZM2G098239 gl2 glossy2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 10,743,536 10,746,206 Zm00001d008622 GRMZM2G481843 gl26 glossy26 Chr8 15,000,230 15,005,452 Zm00001d052397 GRMZM2G162434 gl3 glossy3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Liu et al., 2012 Chr4 189,105,110 189,106,135 Zm00001d051787 GRMZM2G003501 gl4 glossy4 Chr4 169,781,767 169,783,224 Zm00001d017941 GRMZM2G478140 gl4b 3-ketoacyl-CoA synthase gl4b low confidence Chr5 210,498,173 210,500,108 Zm00001d041578 GRMZM2G139786 gl6 glossy6 Li et al., 2018 Chr3 128,055,991 128,056,665 Zm00001d017111 AC205703.4_FG006 gl8 glossy8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 185,769,105 185,772,037 Zm00001d050992 GRMZM2G087323 gl8b 3-ketoacyl reductase GL8B Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT066740 Chr4 135,837,972 135,841,317 Zm00001d013269 GRMZM2G473711 gla3 beta-glucanase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,519,465 7,521,714 Zm00001d033447 GRMZM2G067919 glb1 globulin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 262,991,884 262,994,316 Zm00001d034413 GRMZM2G026703 glb2 globulin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 292,247,305 292,249,329 Zm00001d038597 GRMZM2G410134 glb3 globulin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Maize Cell Genomics Project (Oct 2013) Chr6 160,677,919 160,678,539 Zm00001d008567 GRMZM2G153704 glct1 glucose translocator1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT040792 Chr8 13,146,141 13,153,362 Zm00001d004956 GRMZM2G469969 gldh1 galactono lactone dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of B73_v2 to cDNA AY109467 (Mar 2013 MS) Chr2 150,578,240 150,597,318 Zm00001d044785 GRMZM2G026833 glk1 G2-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AF318580 Chr9 2,407,990 2,410,336 GRMZM2G083472 glk10 G2-like-transcription factor 10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,165,088 58,167,724 Zm00001d020019 GRMZM2G064197 glk101 G2-like-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 86,094,098 86,099,698 Zm00001d017726 AC233960.1_FG003 glk11 G2-like-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 205,300,454 205,303,606 Zm00001d036802 GRMZM2G401835 glk12 G2-like-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 101,302,742 101,304,618 Zm00001d039637 GRMZM2G348238 glk14 G2-like-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,819,488 9,821,687 Zm00001d019536 GRMZM2G162409 glk15 G2-like-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 40,980,861 40,986,910 Zm00001d001936 GRMZM2G035370 glk16 G2-like-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,114,134 3,117,099 Zm00001d029020 GRMZM2G006477 glk17 G2-like-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 55,053,507 55,060,129 Zm00001d015226 GRMZM2G010920 glk18 G2-like-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 80,066,943 80,069,666 Zm00001d040630 GRMZM2G396825 glk19 G2-like-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 55,088,527 55,091,474 Zm00001d046174 GRMZM2G333083 glk2 G2-like-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 69,209,057 69,211,639 Zm00001d017563 GRMZM2G106185 glk20 G2-like-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,683,772 199,686,910 Zm00001d049511 GRMZM2G315506 glk22 G2-like-transcription factor 22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 32,889,820 32,894,110 Zm00001d033310 GRMZM2G039074 glk23 G2-like-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 258,515,868 258,524,876 Zm00001d015521 GRMZM2G060485 glk24 G2-like-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 95,621,404 95,625,832 Zm00001d010634 AC234155.1_FG002 glk25 G2-like-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,651,175 122,654,847 Zm00001d028984 GRMZM2G009060 glk26 G2-like-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 53,531,029 53,533,986 Zm00001d007962 GRMZM2G173882 glk27 G2-like-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 244,254,163 244,256,107 Zm00001d018697 GRMZM2G100176 glk28 G2-like-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,704,641 2,705,350 Zm00001d051527 GRMZM2G070865 glk29 G2-like-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 161,520,154 161,525,256 Zm00001d010280 GRMZM2G471600 glk3 G2-like-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 107,186,649 107,187,548 Zm00001d048448 GRMZM2G374986 glk30 G2-like-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 156,609,608 156,610,275 Zm00001d036638 GRMZM2G100709 glk31 G2-like-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 95,883,200 95,891,164 Zm00001d046981 GRMZM2G454449 glk32 G2-like-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 114,152,611 114,155,554 Zm00001d037015 AC219020.4_FG002 glk33 G2-like-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 109,124,594 109,127,083 Zm00001d046947 GRMZM2G081671 glk34 G2-like-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 112,272,641 112,275,279 Zm00001d005087 GRMZM5G846506 glk35 G2-like-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 157,736,007 157,737,776 Zm00001d002439 GRMZM2G125704 glk36 G2-like-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,647,395 12,650,397 Zm00001d002649 GRMZM2G069525 glk37 G2-like-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 18,092,188 18,095,739 Zm00001d032384 GRMZM2G113742 glk38 G2-like-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 224,850,672 224,860,595 Zm00001d016175 GRMZM2G477238 glk39 G2-like-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 148,523,498 148,526,256 Zm00001d023402 GRMZM2G159119 glk4 G2-like-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,740,647 4,742,679 Zm00001d026106 GRMZM2G090230 glk41 G2-like-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 138,569,154 138,572,986 Zm00001d041376 GRMZM2G370425 glk42 G2-like-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 114,786,221 114,787,925 Zm00001d038527 GRMZM2G701218 glk43 G2-like-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,314,690 159,317,806 Zm00001d034160 GRMZM2G124540 glk44 G2-like-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 285,335,178 285,337,132 Zm00001d032784 GRMZM2G379656 glk45 G2-like-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 238,041,004 238,043,016 Zm00001d017702 GRMZM2G060834 glk47 G2-like-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,630,766 204,635,304 Zm00001d027492 GRMZM5G887276 glk48 G2-like-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,524,381 6,529,577 Zm00001d050404 GRMZM2G168002 glk49 G2-like-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 86,263,641 86,265,848 Zm00001d023411 GRMZM2G016370 glk5 G2-like-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,023,685 5,025,660 Zm00001d030911 GRMZM2G034563 glk50 G2-like-transcription factor50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 166,811,332 166,812,308 Zm00001d038191 GRMZM2G398055 glk51 G2-like-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,070,539 151,071,477 Zm00001d026542 GRMZM2G124495 glk52 G2-like-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,942,412 147,945,498 Zm00001d015407 GRMZM2G052544 glk53 G2-like-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 88,561,896 88,565,000 Zm00001d042892 GRMZM2G074908 glk54 G2-like-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 183,117,455 183,119,171 Zm00001d024532 GRMZM2G123308 glk55 G2-like-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 76,729,754 76,734,531 Zm00001d011785 GRMZM2G067702 glk56 G2-like-transcription factor 56 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 161,545,498 161,546,157 Zm00001d038546 GRMZM2G117854 glk58 G2-like-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,661,656 159,665,659 Zm00001d022526 AC155434.2_FG005 glk59 G2-like-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 179,348,954 179,352,026 Zm00001d032190 GRMZM2G117193 glk6 G2-like-transcription factor 6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 216,310,588 216,316,345 Zm00001d020020 GRMZM2G173943 glk7 G2-like-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 86,219,721 86,224,081 Zm00001d013202 GRMZM2G171468 glk8 G2-like-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 6,405,099 6,407,194 Zm00001d030891 AC234520.1_FG003 glk9 G2-like-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 166,009,842 166,012,367 Zm00001d026501 GRMZM2G098290 gln1 glutamine synthetase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 147,240,629 147,249,381 Zm00001d033747 GRMZM2G024104 gln2 glutamine synthetase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 272,704,775 272,707,957 Zm00001d048050 GRMZM2G046601 gln3 glutamine synthetase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 148,903,155 148,910,943 Zm00001d017958 GRMZM5G872068 gln4 glutamine synthetase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 210,867,625 210,871,221 Zm00001d051804 GRMZM2G036464 gln5 glutamine synthetase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 170,036,696 170,039,992 Zm00001d028260 GRMZM2G050514 gln6 glutamine synthetase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 28,169,233 28,171,917 Zm00001d037513 GRMZM2G064096 glp1 germin-like protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU958158 Chr6 127,667,045 127,667,683 Zm00001d042152 GRMZM2G155348 glpdh1 glycerol-3-phosphate dehydrogenase1 Chr3 153,901,323 153,906,929 Zm00001d012567 GRMZM2G090747 glpdh2 glycerol-3-phosphate dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,775,799 176,779,233 Zm00001d010670 GRMZM2G173195 glpdh3 glycerol-3-phosphate dehydrogenase3 Chr8 123,786,952 123,790,784 Zm00001d041962 GRMZM6G161711 glpdh4 glycerol-3-phosphate dehydrogenase4 Chr3 145,905,008 145,908,254 Zm00001d019218 GRMZM2G063258 glpdh5 glycerol-3-phosphate dehydrogenase5 Chr7 22,313,088 22,317,208 Zm00001d024967 GRMZM2G446108 glpdh6 glycerol-3-phosphate dehydrogenase6 Chr10 97,249,804 97,279,351 Zm00001d023994 GRMZM2G016890 glu1 beta glucosidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 35,174,831 35,179,918 Zm00001d024037 GRMZM2G008247 glu2 beta-glucosidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 38,844,199 38,849,055 Zm00001d024000 GRMZM2G014844 glu3 beta-glucosidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU957786 Chr10 35,675,292 35,679,293 Zm00001d024245 GRMZM2G181192 glx1 glyoxylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY241545 Chr10 59,264,330 59,271,577 Zm00001d049234 GRMZM2G078143 gly1 glycine1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU962459 Chr4 22,022,728 22,027,004 Zm00001d007842 GRMZM2G452178 gn1 gnarley1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 240,672,864 240,679,141 Zm00001d018810 GRMZM2G129246 go1 glycolate oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 5,842,587 5,845,546 Zm00001d052268 GRMZM2G080079 gol1 goliath1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 185,307,585 185,310,033 Zm00001d028931 GRMZM2G165919 gols1 galactinol synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 51,977,839 51,979,551 Zm00001d047582 GRMZM5G872256 gols3 galactinol synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 136,350,922 136,352,658 Zm00001d043217 GRMZM2G113414 gos1 GOS2 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 192,241,636 192,243,077 Zm00001d043382 GRMZM2G094712 got1 glutamate-oxaloacetate transaminase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 Chr3 198,283,208 198,288,738 Zm00001d018386 GRMZM5G836910 got2 glutamate-oxaloacetate transaminase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 219,773,951 219,778,845 Zm00001d016198 GRMZM2G146677 got3 glutamate-oxaloacetic transaminase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of B73)V2 to sequence BT016777.1 Chr5 150,300,976 150,305,724 Zm00001d042685 GRMZM2G400604 got4 glutamate-oxaloacetate transaminase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from CornCyc 4.0 and Gramene (2014) Arabidopsis Orthlog Chr3 176,827,382 176,830,753 Zm00001d010190 GRMZM2G033799 got5 glutamate-oxaloacetate transaminase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Tausta et al 2014 Chr8 103,456,053 103,460,657 Zm00001d003429 GRMZM2G337113 gpa1 glyceraldehyde-3-phosphate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 44,100,341 44,102,181 Zm00001d025593 GRMZM2G039723 gpa2 glyceraldehyde-3-phosphate dehydrogenase2 Chr10 123,448,537 123,450,324 Zm00001d042813 GRMZM2G083195 gpat1 glycerol-3-phosphosphate acyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU962835 Chr3 181,000,679 181,003,338 Zm00001d027488 GRMZM5G845611 gpb1 glyceraldehyde phosphate dehydrogenase B1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU956029 Chr1 6,407,153 6,409,815 Zm00001d049641 GRMZM2G046804 gpc1 glyceraldehyde-3-phosphate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 38,551,544 38,555,126 Zm00001d035156 GRMZM2G180625 gpc2 glyceraldehyde-3-phosphate dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 7,238,033 7,242,155 Zm00001d051001 GRMZM2G071630 gpc3 glyceraldehyde-3-phosphate dehydrogenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 136,187,079 136,190,530 Zm00001d017121 GRMZM2G176307 gpc4 glyceraldehyde-3-phosphate dehydrogenase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT042907 Chr5 186,104,976 186,109,690 Zm00001d003252 GRMZM2G130230 gpdh1 glucose-6-phosphate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 37,956,894 37,965,162 Zm00001d038056 GRMZM2G062527 gpm109a Chr6 146,555,470 146,556,601 Zm00001d003470 GRMZM2G031028 gpm119 Chr2 45,281,416 45,286,675 Zm00001d018085 GRMZM2G160211 gpm17 Chr5 213,951,246 213,951,617 Zm00001d020242 GRMZM2G306935 gpm18 Chr7 101,925,496 101,931,975 Zm00001d022247 GRMZM2G099207 gpm2 Chr7 173,562,438 173,564,183 Zm00001d018494 GRMZM5G840612 gpm21 Chr5 221,797,234 221,800,106 Zm00001d025938 GRMZM2G038394 gpm256 Chr10 134,152,838 134,158,958 Zm00001d048080 GRMZM2G034575 gpm310 Chr9 149,454,969 149,461,485 Zm00001d031132 GRMZM2G094742 gpm4 Chr1 178,992,773 178,997,888 Zm00001d029039 GRMZM2G320325 gpm405 Chr1 55,700,209 55,704,962 Zm00001d046400 GRMZM2G174738 gpm46 Gene model association inferred from similarity with B73 RefGen_v3 gene models from aligment to BT016800 [Fig 1 Kirchberger et al 2007) Chr9 87,391,092 87,394,703 Zm00001d040364 GRMZM2G089982 gpm465 Chr3 40,090,612 40,092,906 Zm00001d014716 GRMZM2G397247 gpm5 Chr5 60,301,620 60,307,045 Zm00001d045534 GRMZM2G119411 gpm6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 25,743,368 25,757,898 Zm00001d002501 GRMZM2G031981 gpm7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 14,135,350 14,155,809 Zm00001d013040 GRMZM2G024657 gpm707 Chr5 3,606,324 3,612,670 Zm00001d009866 GRMZM2G067080 gpm734 Chr8 85,801,961 85,806,980 Zm00001d000302 GRMZM2G166035 gpm803b from Entrez-Gene alignment to B73_v2 B73V4_ctg107 36,639 40,287 Zm00001d006790 GRMZM2G017351 gpm863 Chr2 216,755,232 216,764,301 Zm00001d018060 GRMZM2G070045 gpm874b note ambiguous identity note ambiguous identity Chr5 213,494,647 213,524,574 Zm00001d019518 GRMZM2G016622 gpm930 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 39,337,832 39,338,887 Zm00001d050428 GRMZM2G035268 gpn1 glyceraldehyde-3-phosphate deHaseN1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 87,289,139 87,294,301 Zm00001d000021 GRMZM2G180720 gpt1 glucose 6-phosphate/phosphate translocator1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF020813 B73V4_ctg150 1,459,856 1,464,045 Zm00001d047813 GRMZM2G098784 gras1 GRAS-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 142,473,442 142,477,283 Zm00001d017513 GRMZM2G110579 gras10 GRAS-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 198,244,236 198,246,356 Zm00001d021998 GRMZM2G097456 gras11 GRAS-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 167,723,761 167,725,131 Zm00001d044065 GRMZM5G826526 gras12 GRAS-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 218,260,054 218,261,481 Zm00001d052464 GRMZM2G140094 gras13 GRAS-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 190,503,131 190,505,583 Zm00001d007713 GRMZM2G070371 gras14 GRAS-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 237,959,528 237,961,327 GRMZM5G874545 gras15 GRAS-transcription factor 15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 232,137,122 232,158,937 Zm00001d033166 GRMZM2G335814 gras16 GRAS-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,616,117 252,618,315 Zm00001d015815 GRMZM2G143433 gras17 GRAS-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 123,354,228 123,355,478 Zm00001d035873 GRMZM2G011947 gras18 GRAS-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 58,019,428 58,020,376 Zm00001d021973 GRMZM2G172657 gras19 GRAS-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 167,371,997 167,373,775 Zm00001d011881 GRMZM2G129154 gras2 GRAS-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 163,868,830 163,870,179 Zm00001d030500 GRMZM2G116638 gras21 GRAS-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 139,651,718 139,653,346 Zm00001d026050 GRMZM2G173429 gras22 GRAS-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 137,005,720 137,007,591 Zm00001d042907 GRMZM2G157679 gras23 GRAS-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 183,642,446 183,644,875 Zm00001d052463 GRMZM2G140085 gras24 GRAS-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 190,499,638 190,502,261 Zm00001d003657 GRMZM2G420280 gras25 GRAS-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 52,665,039 52,666,535 Zm00001d048603 GRMZM5G868355 gras26 GRAS-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,051,644 1,057,496 Zm00001d029474 GRMZM2G110067 gras27 GRAS-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 72,302,363 72,303,943 Zm00001d049249 GRMZM2G342217 gras28 GRAS-transcription factor 28 Chr4 22,848,841 22,851,983 Zm00001d023248 AC198366.3_FG004 gras29 GRAS-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 1,456,929 1,458,449 Zm00001d030744 GRMZM2G179325 gras3 GRAS-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 157,566,433 157,567,911 Zm00001d025133 GRMZM2G176537 gras30 GRAS-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 105,808,862 105,810,346 Zm00001d002718 GRMZM5G825321 gras31 GRAS-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 20,400,045 20,402,210 Zm00001d045589 GRMZM2G051785 gras32 GRAS-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 27,423,699 27,425,201 Zm00001d029855 GRMZM2G079470 gras33 GRAS-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 90,443,929 90,445,866 Zm00001d048604 GRMZM2G163427 gras34 GRAS-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,058,559 1,060,856 Zm00001d002023 GRMZM2G386362 gras35 GRAS-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,587,796 4,589,602 Zm00001d030838 GRMZM2G348780 gras36 GRAS-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 162,461,903 162,463,566 Zm00001d005029 GRMZM2G015080 gras37 GRAS-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 154,743,078 154,746,493 Zm00001d021946 GRMZM2G098517 gras38 GRAS-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 166,769,647 166,771,323 Zm00001d017129 GRMZM2G408012 gras39 GRAS-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 186,410,705 186,413,913 Zm00001d042127 GRMZM2G082387 gras4 GRAS-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 152,192,576 152,193,919 Zm00001d034664 GRMZM2G368909 gras40 GRAS-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 299,204,252 299,206,111 Zm00001d048199 GRMZM5G885274 gras41 GRAS-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,292,837 152,294,447 Zm00001d045507 AC234164.1_FG004 gras42 GRAS-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 24,956,261 24,958,111 Zm00001d048600 GRMZM5G895672 gras43 GRAS-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,042,494 1,044,431 Zm00001d048199 GRMZM2G028039 gras45 GRAS-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,292,837 152,294,447 Zm00001d044065 GRMZM2G001426 gras46 GRAS-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 218,260,054 218,261,481 Zm00001d041498 GRMZM2G089782 gras47 GRAS-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 124,367,636 124,370,607 Zm00001d048588 GRMZM2G018254 gras48 GRAS-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 712,461 714,365 Zm00001d006551 GRMZM5G821439 gras49 GRAS-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 210,843,272 210,854,196 Zm00001d041919 GRMZM2G146018 gras5 GRAS-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 143,639,361 143,640,839 Zm00001d041536 GRMZM2G159475 gras50 GRAS domain family50 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene Chr3 126,130,758 126,132,890 Zm00001d003553 GRMZM2G028608 gras51 GRAS-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 47,859,916 47,861,739 Zm00001d002573 GRMZM2G109869 gras52 GRAS-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,738,092 15,739,963 Zm00001d027292 GRMZM2G060265 gras53 GRAS-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 2,019,934 2,021,379 Zm00001d021826 GRMZM2G106548 gras54 GRAS-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 163,785,585 163,786,943 Zm00001d013385 GRMZM2G104342 gras55 GRAS-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,169,946 10,171,655 Zm00001d038518 GRMZM2G037286 gras56 GRAS-transcription factor 56 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,108,179 159,109,672 Zm00001d035670 GRMZM2G089662 gras57 GRAS-transcription factor 57 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 40,169,888 40,172,068 Zm00001d029607 GRMZM2G132794 gras58 GRAS-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009); also From: Slewinski et al., 2014 Chr1 79,004,272 79,006,164 Zm00001d048624 AC204621.4_FG006 gras59 GRAS-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,538,337 1,539,457 Zm00001d011070 GRMZM2G346706 gras6 GRAS-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 138,014,214 138,016,097 Zm00001d035671 GRMZM2G089636 gras60 GRAS-transcription factor 60 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 40,181,265 40,183,145 Zm00001d028526 GRMZM2G055263 gras61 GRAS-transcription factor 61 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 38,187,938 38,189,632 Zm00001d038609 GRMZM2G313078 gras62 GRAS-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,900,038 160,901,318 Zm00001d022034 GRMZM2G418899 gras63 GRAS-transcription factor 63 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 168,331,519 168,332,583 Zm00001d007248 GRMZM2G425366 gras64 GRAS-transcription factor 64 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 225,609,655 225,611,470 Zm00001d033834 GRMZM2G133169 gras65 GRAS-transcription factor 65 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 275,262,743 275,264,398 AC200124.3_FG005 gras66 GRAS-transcription factor 66 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 62,906,676 62,907,011 Zm00001d028603 GRMZM2G049159 gras67 GRAS-transcription factor 67 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,510,526 40,516,015 Zm00001d048601 GRMZM2G073823 gras68 GRAS-transcription factor 68 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,045,391 1,047,319 Zm00001d038225 GRMZM2G153333 gras69 GRAS-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,983,412 151,987,196 Zm00001d042472 GRMZM2G013016 gras7 GRAS-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 168,768,639 168,770,255 Zm00001d046783 GRMZM2G114680 gras70 GRAS-transcription factor 70 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 105,852,291 105,853,661 Zm00001d047123 GRMZM2G117949 gras71 GRAS-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 119,342,278 119,342,634 Zm00001d048602 GRMZM2G073805 gras72 GRAS-transcription factor 72 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,048,188 1,050,188 Zm00001d006744 GRMZM2G125501 gras73 GRAS-transcription factor 73 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 215,722,019 215,723,389 Zm00001d047266 GRMZM2G359304 gras74 GRAS-transcription factor 74 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 124,861,500 124,863,107 Zm00001d006701 GRMZM2G431309 gras75 GRAS-transcription factor 75 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 214,683,529 214,685,193 Zm00001d051461 GRMZM2G028438 gras76 GRAS-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 159,541,879 159,543,702 Zm00001d037901 GRMZM5G889326 gras77 GRAS-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 141,534,061 141,535,449 Zm00001d026158 GRMZM2G037792 gras79 GRAS-transcription factor 79 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,012,416 140,014,572 Zm00001d051387 GRMZM2G098800 gras80 GRAS-transcription factor 80 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 156,767,880 156,770,006 Zm00001d022116 GRMZM2G169636 gras81 GRAS-transcription factor 81 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 170,723,712 170,725,349 Zm00001d048682 GRMZM2G106356 gras82 GRAS-transcription factor 82 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 3,226,716 3,228,605 Zm00001d048603 GRMZM2G073779 gras83 GRAS-transcription factor 83 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,051,644 1,057,496 Zm00001d048681 GRMZM2G106336 gras84 GRAS-transcription factor 84 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 3,223,779 3,225,488 Zm00001d006721 GRMZM2G019060 gras85 GRAS-transcription factor 85 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 215,252,093 215,253,853 Zm00001d023247 GRMZM2G317287 gras86 GRAS-transcription factor 86 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 1,452,722 1,454,992 Zm00001d053163 GRMZM2G091656 gras9 GRAS-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 217,428,587 217,430,008 Zm00001d003401 GRMZM2G102499 grf1 general regulatory factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 43,088,493 43,092,367 Zm00001d025617 GRMZM2G078641 grf2 general regulatory factor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 124,144,806 124,148,744 Zm00001d018260 GRMZM5G893117 grf9 growth-regulating factor9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 217,546,954 217,548,912 Zm00001d033876 GRMZM2G178261 grftf1 GRF-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 277,130,907 277,134,992 Zm00001d052112 GRMZM2G105335 grftf10 GRF-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 180,147,356 180,150,053 Zm00001d037117 GRMZM5G850129 grftf11 GRF-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 112,965,440 112,967,072 Zm00001d000238 GRMZM2G067743 grftf12 GRF-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg49 34,019 35,965 Zm00001d017602 GRMZM2G045977 grftf13 GRF-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,330,993 201,332,190 Zm00001d013346 GRMZM5G853392 grftf14 GRF-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,051,468 9,063,110 Zm00001d007465 GRMZM2G099862 grftf15 GRF-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 232,275,513 232,278,861 Zm00001d006348 GRMZM2G004619 grftf2 GRF-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 205,258,531 205,260,875 Zm00001d021362 GRMZM2G096709 grftf3 GRF-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 149,911,394 149,914,056 Zm00001d033396 GRMZM2G018414 grftf4 GRF-transcription factor 4 Chr1 261,791,305 261,794,041 Zm00001d026240 GRMZM2G129147 grftf5 GRF-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 141,714,589 141,718,409 Zm00001d017742 GRMZM2G034876 grftf6 GRF-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 205,734,245 205,737,675 Zm00001d035965 GRMZM2G098594 grftf7 GRF-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 62,968,941 62,972,074 Zm00001d002429 GRMZM2G041223 grftf8 GRF-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,492,416 12,496,032 Zm00001d051456 GRMZM2G124566 grftf9 GRF-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 159,322,444 159,323,547 Zm00001d022590 GRMZM2G005732 GRMZM2G005732 Chr7 180,509,587 180,543,685 Zm00001d018324 GRMZM2G008367 GRMZM2G008367 Chr5 218,457,249 218,457,797 Zm00001d035056 GRMZM2G015708 GRMZM2G015708 Chr6 3,352,342 3,357,658 Zm00001d016311 GRMZM2G021110 GRMZM2G021110 Sanchez et al., 2017 Chr5 156,652,377 156,668,073 Zm00001d002971 GRMZM2G021694 GRMZM2G021694 Gene model association inferred from similarity with B73 RefGen_v3 gene models From Sequence in Yang et al., 2016 Chr2 28,374,464 28,376,302 Zm00001d013709 GRMZM2G023347 GRMZM2G023347 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 18,220,021 18,227,041 Zm00001d020364 GRMZM2G025646 GRMZM2G025646 Chr7 109,507,759 109,509,454 Zm00001d016351 GRMZM2G028366 GRMZM2G028366 Chr5 158,826,371 158,834,671 Zm00001d011504 GRMZM2G030167 GRMZM2G030167 Chr8 152,696,181 152,705,526 Zm00001d041640 GRMZM2G032198 GRMZM2G032198 Chr3 131,076,999 131,080,509 Zm00001d007240 GRMZM2G033962 GRMZM2G033962 Gene model association inferred from similarity with B73 RefGen_v3 gene models Jamann et al., 2017 Chr2 225,519,590 225,524,863 Zm00001d034382 GRMZM2G035890 GRMZM2G035890 Chr1 291,401,832 291,403,841 Zm00001d032576 GRMZM2G036455 GRMZM2G036455 Chr1 231,120,510 231,123,615 Zm00001d033454 GRMZM2G039373 GRMZM2G039373 Chr1 263,067,917 263,072,723 Zm00001d033300 GRMZM2G043191 GRMZM2G043191 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 258,063,193 258,065,454 Zm00001d019277 GRMZM2G046532 GRMZM2G046532 Chr7 25,228,779 25,229,478 Zm00001d005335 GRMZM2G047727 GRMZM2G047727 Chr2 169,840,387 169,840,530 Zm00001d008777 GRMZM2G047949 GRMZM2G047949 Chr8 19,654,741 19,663,889 Zm00001d032103 GRMZM2G048522 GRMZM2G048522 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 213,126,776 213,129,233 Zm00001d006238 GRMZM2G050193 GRMZM2G050193 Chr2 202,615,728 202,622,663 Zm00001d003188 GRMZM2G051921 GRMZM2G051921 Chr2 35,038,971 35,040,155 Zm00001d021930 GRMZM2G055216 GRMZM2G055216 Chr7 166,043,423 166,047,307 Zm00001d035214 GRMZM2G055238 GRMZM2G055238 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 10,070,049 10,071,716 Zm00001d027454 GRMZM2G055704 GRMZM2G055704 v4 Chr1 5,603,127 5,604,467 Zm00001d002020 GRMZM2G059740 GRMZM2G059740 Chr2 4,479,323 4,481,492 Zm00001d036233 GRMZM2G060870 GRMZM2G060870 Chr6 78,373,473 78,381,861 Zm00001d021757 GRMZM2G060993 GRMZM2G060993 Chr7 162,458,730 162,460,286 Zm00001d003515 GRMZM2G062559 GRMZM2G062559 Chr2 46,328,464 46,330,364 Zm00001d038340 GRMZM2G066153 GRMZM2G066153 Chr6 154,857,022 154,859,451 Zm00001d020752 GRMZM2G072240 GRMZM2G072240 Chr7 131,210,348 131,213,927 Zm00001d013937 GRMZM2G073351 GRMZM2G073351 Chr5 25,431,430 25,434,346 Zm00001d021698 GRMZM2G075438 GRMZM2G075438 Chr7 160,625,147 160,627,766 Zm00001d030670 GRMZM2G075456 GRMZM2G075456 Chr1 152,150,826 152,153,067 Zm00001d013222 GRMZM2G077034 GRMZM2G077034 Chr5 6,718,595 6,719,557 Zm00001d039471 GRMZM2G077227 GRMZM2G077227 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 5,157,787 5,160,649 Zm00001d018151 GRMZM2G083138 GRMZM2G083138 Chr5 215,569,988 215,588,200 Zm00001d005346 GRMZM2G085153 GRMZM2G085153 Chr2 170,380,531 170,384,466 Zm00001d046888 GRMZM2G085218 GRMZM2G085218 Gene model association inferred from similarity with B73 RefGen_v3 gene models Jamann et al., 2017 Chr9 108,884,356 108,885,024 Zm00001d048711 GRMZM2G085854 GRMZM2G085854 Chr4 3,843,348 3,844,823 Zm00001d005328 GRMZM2G085939 GRMZM2G085939 Chr2 169,705,296 169,710,634 Zm00001d052683 GRMZM2G097297 GRMZM2G097297 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 197,237,690 197,239,606 Zm00001d026055 GRMZM2G098676 GRMZM2G098676 Venado et al, 2017 Chr10 137,223,044 137,225,822 Zm00001d042393 GRMZM2G101217 GRMZM2G101217 Chr3 164,355,992 164,361,838 Zm00001d006798 GRMZM2G102625 GRMZM2G102625 Chr2 216,935,090 216,965,652 Zm00001d045685 GRMZM2G105364 GRMZM2G105364 Chr9 33,208,139 33,209,281 Zm00001d020014 GRMZM2G106903 GRMZM2G106903 Chr7 85,615,135 85,627,490 Zm00001d027694 GRMZM2G112728 GRMZM2G112728 Chr1 11,299,491 11,303,586 Zm00001d030236 GRMZM2G117940 GRMZM2G117940 Chr1 115,306,970 115,307,682 Zm00001d048950 GRMZM2G117942 GRMZM2G117942 Chr4 10,553,796 10,554,681 Zm00001d047425 GRMZM2G119067 GRMZM2G119067 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 129,655,579 129,671,140 Zm00001d005253 GRMZM2G124103 GRMZM2G124103 Chr2 165,939,745 165,942,452 Zm00001d042140 GRMZM2G125032 GRMZM2G125032 Chr3 153,224,735 153,226,799 GRMZM2G128395 GRMZM2G128395 Low confidence Chr10 113,784,034 113,785,350 GRMZM2G128995 GRMZM2G128995 Chr8 77,266,793 77,270,611 Zm00001d043019 GRMZM2G132169 GRMZM2G132169 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 186,606,093 186,608,615 Zm00001d043174 GRMZM2G138074 GRMZM2G138074 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 190,625,724 190,628,445 Zm00001d046624 GRMZM2G145104 GRMZM2G145104 Xu et al., 2017 Chr9 99,409,598 99,416,154 Zm00001d020762 GRMZM2G145152 GRMZM2G145152 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 131,549,688 131,551,010 Zm00001d036366 GRMZM2G145518 GRMZM2G145518 Chr6 85,857,785 85,858,714 Zm00001d011975 GRMZM2G447406 GRMZM2G147226 Chr8 165,490,510 165,506,030 Zm00001d017293 GRMZM2G153368 GRMZM2G153368 Chr5 192,003,421 192,010,358 Zm00001d008285 GRMZM2G153434 GRMZM2G153434 Chr8 4,076,176 4,083,815 Zm00001d050089 GRMZM2G153722 GRMZM2G153722 Gene model association inferred from similarity with B73 RefGen_v3 gene models Pace et al., 2015 Chr4 65,078,952 65,090,738 Zm00001d029885 GRMZM2G154580 GRMZM2G154580 Gene model association inferred from similarity with B73 RefGen_v3 gene models Jamann et al., 2017 Chr1 92,217,234 92,219,505 Zm00001d025019 GRMZM2G157313 GRMZM2G157313 Chr10 99,972,964 99,975,683 Zm00001d021710 GRMZM2G158062 GRMZM2G158062 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 160,976,058 160,981,308 Zm00001d004754 GRMZM2G159503 GRMZM2G159503 Chr2 136,422,827 136,423,366 Zm00001d031450 GRMZM2G161004 GRMZM2G161004 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 190,370,386 190,373,502 Zm00001d042637 GRMZM2G167253 GRMZM2G167253 Chr3 174,787,067 174,792,369 Zm00001d012475 GRMZM2G169695 GRMZM2G169695 Chr8 175,178,145 175,184,442 Zm00001d049330 GRMZM2G174449 GRMZM2G174449 Chr4 26,654,487 26,655,827 Zm00001d005190 GRMZM2G175576 GRMZM2G175576 Chr2 163,038,225 163,041,426 Zm00001d042461 GRMZM2G177227 GRMZM2G177227 Chr3 168,478,175 168,480,329 Zm00001d021291 GRMZM2G179024 GRMZM2G179024 Chr7 148,065,548 148,071,232 Zm00001d017992 GRMZM2G179768 GRMZM2G179768 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 211,553,897 211,554,963 Zm00001d035206 GRMZM2G301884 GRMZM2G301884 Chr6 9,899,027 9,902,389 Zm00001d053715 GRMZM2G304712 GRMZM2G304712 Chr4 239,764,267 239,765,769 Zm00001d020332 GRMZM2G315431 GRMZM2G315431 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 107,145,738 107,147,834 Zm00001d034373 GRMZM2G329181 GRMZM2G329181 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 291,111,822 291,114,965 Zm00001d013054 GRMZM2G350428 GRMZM2G350428 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr5 3,895,207 3,898,568 Zm00001d047269 GRMZM2G359322 GRMZM2G359322 Gene model association inferred from similarity with B73 RefGen_v3 gene models Jamann et al., 2017 Chr9 124,897,628 124,898,960 Zm00001d004491 GRMZM2G359974 GRMZM2G359974 Chr2 114,834,796 114,836,127 Zm00001d006212 GRMZM2G367834 GRMZM2G367834 Chr2 201,957,643 201,964,027 Zm00001d022072 GRMZM2G370081 GRMZM2G370081 Chr7 169,436,693 169,442,713 Zm00001d053997 GRMZM2G374088 GRMZM2G374088 Chr4 244,821,758 244,829,813 Zm00001d041645 GRMZM2G374405 GRMZM2G374405 Chr3 131,385,139 131,385,393 Zm00001d031731 GRMZM2G380227 GRMZM2G380227 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 200,023,769 200,025,791 Zm00001d008681 GRMZM2G380414 GRMZM2G380414 Chr8 16,986,395 16,986,763 Zm00001d010671 GRMZM2G380561 GRMZM2G380561 Chr8 123,808,321 123,811,312 Zm00001d005333 GRMZM2G386138 GRMZM2G386138 Chr2 169,798,951 169,799,577 Zm00001d001990 GRMZM2G391746 GRMZM2G391746 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr2 4,060,451 4,060,702 Zm00001d020857 GRMZM2G404929 GRMZM2G404929 Chr7 134,894,272 134,896,380 Zm00001d006611 GRMZM2G418415 GRMZM2G418415 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 212,555,875 212,556,879 Zm00001d008924 GRMZM2G423617 GRMZM2G423617 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr8 25,432,719 25,433,141 Zm00001d026498 GRMZM2G427603 GRMZM2G427603 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr10 147,196,018 147,196,308 Zm00001d002557 GRMZM2G430500 GRMZM2G430500 Chr2 15,316,483 15,316,830 Zm00001d025323 GRMZM2G443509 GRMZM2G443509 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 114,052,762 114,058,481 Zm00001d005189 GRMZM2G455491 GRMZM2G455491 Chr2 163,016,710 163,020,248 Zm00001d020858 GRMZM2G464985 GRMZM2G464985 Chr7 134,901,536 134,904,779 Zm00001d042057 GRMZM2G479112 GRMZM2G479112 Chr3 148,970,593 148,972,670 Zm00001d019092 GRMZM2G480050 GRMZM2G480050 Gene model association inferred from similarity with B73 RefGen_v3 gene models Je et al., 2016 Chr7 15,921,034 15,921,977 Zm00001d048660 GRMZM5G815098 GRMZM5G815098 Chr4 2,847,383 2,847,973 Zm00001d015065 GRMZM5G872147 GRMZM5G872147 Sanchez et al, 2017 Chr5 73,929,573 73,937,751 Zm00001d010537 GRMZM5G883149 GRMZM5G883149 Chr8 119,697,753 119,699,902 Zm00001d019259 GRMZM5G892627 GRMZM5G892627 Chr7 24,363,166 24,364,886 Zm00001d021273 GRMZM5G899476 GRMZM5G899476 Chr7 147,467,203 147,467,622 Zm00001d031168 GRMZM2G080603 grp1 glycine-rich protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 180,447,018 180,448,137 Zm00001d023734 GRMZM2G009448 grp2 glycine-rich protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 17,851,766 17,855,585 Zm00001d014100 GRMZM2G154954 grp3 glycine-rich protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 32,482,212 32,482,991 Zm00001d004728 GRMZM2G025205 grp4 glycine rich protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AB014475 Chr2 134,139,577 134,140,330 Zm00001d003081 GRMZM2G150295 grx1 glutaredoxin homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from T12674 Chr2 31,389,813 31,393,200 Zm00001d035445 GRMZM2G111579 gsh1 gamma-glutamylcysteine synthetase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 25,930,825 25,935,845 Zm00001d034035 GRMZM2G421491 gsht1 glutathione transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_2 alignment to sequence accession FJ573212 Chr1 281,760,570 281,764,626 Zm00001d027769 GRMZM2G172322 gsr1 glutathione reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 13,177,255 13,183,634 Zm00001d018033 GRMZM2G105791 gss1 starch synthase homolog1 v4 Chr5 212,494,773 212,500,400 Zm00001d012675 GRMZM2G116273 gst1 glutathione-S-transferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 178,411,857 178,414,647 Zm00001d027542 GRMZM2G096153 gst10 glutathione transferase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,885,525 7,886,863 Zm00001d027539 GRMZM2G119499 gst11 glutathione transferase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,844,326 7,845,737 Zm00001d027540 GRMZM2G096269 gst12 glutathione S-transferase12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,878,334 7,879,915 Zm00001d048353 GRMZM2G126781 gst13 glutathione transferase13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,861,537 154,862,959 Zm00001d029801 GRMZM2G175134 gst14 glutathione transferase14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 87,469,723 87,475,392 Zm00001d010870 GRMZM2G150474 gst15 glutathione transferase15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 131,542,385 131,544,754 Zm00001d021470 GRMZM5G895383 gst16 glutathione transferase16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 153,075,349 153,079,559 Zm00001d016860 GRMZM2G064255 gst17 glutathione transferase17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 178,504,960 178,508,727 Zm00001d041772 GRMZM2G019090 gst18 glutathione transferase18 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF244683 Chr3 136,996,989 137,007,669 Zm00001d036951 GRMZM2G335618 gst19 glutathione transferase19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 107,194,843 107,195,520 Zm00001d024839 GRMZM2G132093 gst2 glutathione S-transferase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Christensen et al. 2015 Chr10 90,384,434 90,385,822 Zm00001d043787 GRMZM2G447632 gst20 glutathione transferase20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 210,237,044 210,238,359 Zm00001d042096 GRMZM2G428168 gst21 glutathione transferase21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 150,586,826 150,587,533 Zm00001d024963 GRMZM2G330635 gst22 glutathione transferase22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 96,969,512 96,970,459 Zm00001d020780 GRMZM2G416632 gst23 glutathione transferase23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 132,447,942 132,449,006 Zm00001d018220 GRMZM2G032856 gst24 glutathione transferase24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,862,591 216,863,616 Zm00001d048558 GRMZM2G161905 gst25 glutathione transferase25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 158,667,068 158,667,751 Zm00001d049657 GRMZM2G363540 gst26 glutathione transferase26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 38,891,516 38,892,238 Zm00001d011154 GRMZM2G077206 gst27 glutathione transferase27 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to AF244692 Chr8 140,938,753 140,939,834 Zm00001d042102 GRMZM2G146475 gst28 glutathione transferase28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 150,720,597 150,721,538 Zm00001d042095 GRMZM2G127789 gst29 glutathione transferase29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 150,585,101 150,586,111 Zm00001d029708 GRMZM2G044383 gst30 glutathione transferase30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,411,025 83,411,720 Zm00001d027557 GRMZM2G475059 gst31 glutathione transferase31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,129,042 8,130,156 Zm00001d029700 GRMZM2G041685 gst32 glutathione transferase32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,119,704 83,120,481 Zm00001d029696 GRMZM2G145069 gst34 glutathione transferase34 v4 Chr1 82,924,832 82,926,012 Zm00001d048559 GRMZM2G161891 gst35 glutathione transferase35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 158,676,251 158,677,196 Zm00001d029704 GRMZM2G178079 gst37 glutathione transferase37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,198,362 83,199,180 Zm00001d029707 GRMZM2G066369 gst38 glutathione transferase38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,264,283 83,265,235 Zm00001d029706 GRMZM2G028821 gst39 glutathione transferase39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,226,938 83,228,043 Zm00001d042216 GRMZM2G146246 gst4 glutathione S-transferase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 156,422,305 156,423,867 Zm00001d029701 GRMZM2G054653 gst40 glutathione transferase40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,132,970 83,133,833 Zm00001d038192 GRMZM2G097989 gst41 glutathione transferase41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,106,706 151,108,105 Zm00001d029699 GRMZM2G025190 gst42 glutathione transferase42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,058,555 83,059,659 Zm00001d034356 GRMZM2G308687 gst5 glutathione transferase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 290,470,998 290,471,672 Zm00001d018809 GRMZM2G129357 gst6 glutathione transferase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 5,834,880 5,838,491 Zm00001d042104 GRMZM2G028556 gst7 glutathione transferase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 150,759,060 150,760,119 Zm00001d043344 GRMZM2G156877 gst8 glutathione transferase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 197,152,506 197,154,049 Zm00001d048354 GRMZM2G126763 gst9 glutathione transferase9 Chr9 154,871,684 154,872,915 Zm00001d028129 GRMZM2G005624 gt1 grassy tillers1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Whipple et al 2011 Chr1 23,625,801 23,627,370 Zm00001d014998 GRMZM5G806358 gtc102 global transcription factor C (Spt16) Chr5 71,503,072 71,509,439 Zm00001d026405 GRMZM2G177412 gtr1 glutamyl-tRNA reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: W21756; B73_v2 model provided by A Huffaker May 2013 for propep2 Chr10 145,315,798 145,319,169 Zm00001d039547 GRMZM2G048012 gts1 Glutamine--tRNA ligase cytoplasmic1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 7,812,566 7,818,795 Zm00001d030624 GRMZM2G432850 gun1 genomes uncoupled1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 149,517,794 149,522,592 Zm00001d023427 GRMZM2G464328 gun4 genomes uncoupled4 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr10 5,286,289 5,287,104 Zm00001d020591 GRMZM2G138689 gz50 50kD gamma zein Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF371263 Chr7 123,954,263 123,955,189 Zm00001d041378 GRMZM2G069886 hac101a Chr3 114,791,126 114,801,047 Zm00001d030914 GRMZM2G335438 hac101b histone acetyltransferase101b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,903,822 166,924,697 Zm00001d046579 GRMZM2G042231 haf101b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 96,779,812 96,809,887 Zm00001d014175 GRMZM2G046021 hag101 histone acetyl transferase GNAT/MYST 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) to hagtf23 Chr5 34,988,400 34,994,302 Zm00001d003258 GRMZM2G100872 hag103a histone acetyl transferase GNAT/MYST103a Gene model association inferred from similarity with B73 RefGen_v3 gene models hagtf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 38,097,924 38,102,928 Zm00001d025713 GRMZM2G359735 hag103b histone acetyl transferase GNAT/MYST103b Gene model association inferred from similarity with B73 RefGen_v3 gene models hagtf42 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 127,154,778 127,159,945 Zm00001d027703 AC209858.4_FG004 hagtf1 GNAT-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 11,493,216 11,495,046 Zm00001d004046 GRMZM2G126856 hagtf12 GNAT-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 78,654,099 78,655,004 Zm00001d004611 GRMZM2G162056 hagtf13 GNAT-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 121,662,299 121,662,886 Zm00001d007387 GRMZM5G875676 hagtf14 GNAT-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 230,449,349 230,454,131 Zm00001d042003 GRMZM2G371912 hagtf15 GNAT-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 146,955,644 146,958,515 Zm00001d044368 GRMZM2G333775 hagtf16 GNAT-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 226,325,648 226,326,241 Zm00001d044446 GRMZM2G137961 hagtf17 GNAT-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 228,293,972 228,296,826 Zm00001d049501 GRMZM2G055141 hagtf18 GNAT-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 32,640,368 32,643,706 Zm00001d051663 GRMZM2G011624 hagtf19 GNAT-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 165,937,945 165,938,436 Zm00001d028074 GRMZM2G114184 hagtf2 GNAT-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 22,016,444 22,018,586 Zm00001d052680 GRMZM2G059302 hagtf20 GNAT-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 197,106,177 197,117,342 Zm00001d013087 GRMZM2G431445 hagtf21 GNAT-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,531,531 4,532,118 Zm00001d013596 GRMZM2G176723 hagtf22 GNAT-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 15,094,771 15,095,668 Zm00001d015508 GRMZM2G479325 hagtf24 GNAT-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 94,528,626 94,530,376 Zm00001d017691 GRMZM2G169326 hagtf25 GNAT-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,333,624 204,344,512 Zm00001d018218 GRMZM2G046288 hagtf26 GNAT-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 216,753,835 216,756,759 Zm00001d036716 GRMZM2G049730 hagtf27 GNAT-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,531,308 98,533,026 Zm00001d037529 GRMZM2G402538 hagtf28 GNAT-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 128,190,263 128,195,748 Zm00001d038054 GRMZM2G062657 hagtf29 GNAT-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 146,525,775 146,534,899 Zm00001d032548 GRMZM2G131618 hagtf3 GNAT-transcription factor 3 assigned by the Grassius project, (Yilmaz et al 2009)assigned by the Grassius project, (Yilmaz et al 2009) Chr1 230,202,990 230,203,968 Zm00001d038490 GRMZM2G701207 hagtf30 GNAT-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,527,082 158,528,668 Zm00001d018677 GRMZM2G458082 hagtf31 GNAT-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,375,647 2,377,309 Zm00001d019343 GRMZM2G302778 hagtf32 GNAT-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 28,785,037 28,786,860 Zm00001d021956 GRMZM5G813007 hagtf33 GNAT-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 167,089,441 167,095,239 Zm00001d010192 GRMZM2G034495 hagtf34 GNAT-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 103,464,635 103,466,114 Zm00001d046823 GRMZM2G050137 hagtf35 GNAT-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 107,325,990 107,327,852 Zm00001d048194 GRMZM2G096352 hagtf36 GNAT-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,171,884 152,176,225 Zm00001d048286 GRMZM2G136389 hagtf37 GNAT-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 153,893,462 153,897,261 Zm00001d048407 AC149475.2_FG007 hagtf38 GNAT-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 155,701,484 155,702,161 Zm00001d048574 GRMZM2G134426 hagtf39 GNAT-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 159,326,202 159,349,212 Zm00001d032556 GRMZM2G135849 hagtf4 GNAT-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 230,440,139 230,441,090 Zm00001d024169 GRMZM2G137715 hagtf40 GNAT-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 52,321,108 52,329,461 Zm00001d025640 GRMZM2G057554 hagtf41 GNAT-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 124,760,949 124,764,322 Zm00001d026391 GRMZM5G818977 hagtf43 GNAT-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,991,865 144,994,560 Zm00001d034143 GRMZM2G099305 hagtf6 GNAT-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 285,008,208 285,010,916 Zm00001d034417 GRMZM2G031062 hagtf7 GNAT-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,390,330 292,390,911 Zm00001d034418 GRMZM2G342856 hagtf8 GNAT-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,463,721 292,464,302 Zm00001d034419 GRMZM2G478798 hagtf9 GNAT-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,476,450 292,477,004 Zm00001d006918 GRMZM2G044126 ham101 histone acetyl transferase MYST family 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 219,348,782 219,353,657 Zm00001d020182 GRMZM5G851405 hat1 histone acetyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 98,081,497 98,087,107 Zm00001d048020 GRMZM2G067402 hb1 hemoglobin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to cDNA AF236080 Chr9 148,178,266 148,179,408 Zm00001d037140 GRMZM2G004334 hb10 Homeobox-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 113,744,465 113,748,815 Zm00001d029736 GRMZM2G064466 hb100 Homeobox-transcription factor 100 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 84,581,725 84,587,077 Zm00001d008942 GRMZM2G111964 hb101 Homeobox-transcription factor 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 26,279,366 26,280,197 Zm00001d027852 GRMZM2G139963 hb102 Homeobox-transcription factor 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,193,281 15,196,077 Zm00001d006687 GRMZM2G062244 hb107 Homeobox-transcription factor 107 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 214,450,310 214,451,531 GRMZM2G060050 hb108 Homeobox-transcription factor 108 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,753,231 6,754,253 Zm00001d020670 GRMZM2G127537 hb11 Homeobox-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 127,456,340 127,458,007 Zm00001d033404 GRMZM2G061101 hb110 Homeobox-transcription factor 110 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 262,057,100 262,063,813 Zm00001d032316 GRMZM2G003304 hb112 Homeobox-transcription factor 112 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 221,942,141 221,946,939 Zm00001d011560 GRMZM2G060541 hb113 Homeobox-transcription factor 113 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,457,261 154,486,289 Zm00001d037895 GRMZM2G381748 hb114 Homeobox-transcription factor 114 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 141,328,415 141,331,089 Zm00001d051749 GRMZM2G021339 hb115 Homeobox-transcription factor 115 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 168,776,069 168,778,157 Zm00001d043231 GRMZM2G386276 hb118 Homeobox-transcription factor 118 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 192,587,492 192,592,698 Zm00001d031061 GRMZM2G003509 hb119 Homeobox-transcription factor 119 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 175,170,463 175,176,066 Zm00001d048227 AC233899.1_FG004 hb12 Homeobox-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,791,018 152,793,577 Zm00001d020804 GRMZM2G056600 hb120 Homeobox-transcription factor 120 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,411,779 133,413,849 Zm00001d030191 GRMZM2G131476 hb121 Homeobox-transcription factor 121 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 112,125,984 112,127,811 Zm00001d026537 GRMZM2G028622 hb122 Homeobox-transcription factor 122 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,855,536 147,856,873 Zm00001d010060 GRMZM2G074645 hb123 Homeobox-transcription factor 123 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 97,570,198 97,574,373 Zm00001d033246 GRMZM2G023291 hb124 Homeobox-transcription factor 124 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 255,864,303 255,869,980 Zm00001d006195 GRMZM2G034113 hb126 Homeobox-transcription factor 126 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 201,274,832 201,276,496 Zm00001d030532 GRMZM2G119999 hb127 Homeobox-transcription factor 127 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 142,193,026 142,194,949 Zm00001d021268 GRMZM2G041462 hb128 Homeobox-transcription factor 128 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 147,335,002 147,336,496 Zm00001d031745 GRMZM2G142962 hb129 Homeobox-transcription factor 129 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 200,647,593 200,649,580 Zm00001d021934 GRMZM2G104204 hb13 Homeobox-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 166,183,894 166,185,410 Zm00001d028986 GRMZM2G314064 hb130 Homeobox-transcription factor 130 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 53,579,645 53,583,324 Zm00001d005584 GRMZM2G111204 hb131 Homeobox-transcription factor 131 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 179,525,467 179,531,907 Zm00001d000247 GRMZM2G118063 hb17 Homeobox-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg123 9,585 17,517 Zm00001d024701 GRMZM2G004957 hb18 Homeobox-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 84,124,039 84,129,119 Zm00001d038718 GRMZM2G168898 hb2 hemoglobin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models alingns to cDNA DQ171946 Chr6 163,324,435 163,325,813 Zm00001d048471 GRMZM2G060507 hb20 Homeobox-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 156,890,103 156,894,363 Zm00001d046223 GRMZM2G076272 hb21 Homeobox-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 73,064,270 73,067,798 Zm00001d048312 GRMZM2G178741 hb22 Homeobox-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,433,350 154,435,731 Zm00001d000303 GRMZM2G166041 hb24 Homeobox-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg107 44,572 45,477 Zm00001d041489 GRMZM2G178102 hb25 Homeobox-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 123,607,100 123,613,712 Zm00001d008612 GRMZM2G010929 hb26 Homeobox-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 14,469,570 14,471,588 Zm00001d015671 GRMZM2G426140 hb27 Homeobox-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 105,092,463 105,093,878 Zm00001d015265 GRMZM2G033138 hb28 Homeobox-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 81,987,671 81,994,006 Zm00001d009562 GRMZM2G125294 hb29 Homeobox-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 70,193,548 70,205,812 Zm00001d039002 GRMZM2G122750 hb3 Homeobox-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,609,968 168,621,490 Zm00001d027435 GRMZM2G327059 hb30 Homeobox-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,202,748 5,208,577 Zm00001d033378 GRMZM2G011588 hb33 Homeobox-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 261,046,942 261,053,205 Zm00001d005692 GRMZM2G002915 hb34 Homeobox-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 183,562,202 183,564,363 Zm00001d018285 GRMZM2G333565 hb35 Homeobox-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 217,924,879 217,926,686 Zm00001d033898 GRMZM2G396114 hb36 Homeobox-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 277,881,879 277,892,452 Zm00001d013547 GRMZM2G148098 hb37 Homeobox-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 14,028,554 14,034,708 Zm00001d035907 GRMZM2G013617 hb38 Homeobox-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 59,432,425 59,435,437 Zm00001d045400 GRMZM2G106276 hb4 Homeobox-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,678,179 20,679,403 Zm00001d042228 GRMZM2G158403 hb40 Homeobox-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 156,887,633 156,898,805 Zm00001d017422 GRMZM2G117164 hb41 Homeobox-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 195,636,860 195,637,865 Zm00001d014628 GRMZM2G477415 hb42 Homeobox-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 56,552,093 56,553,397 Zm00001d014630 GRMZM2G307397 hb43 Homeobox-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 56,629,737 56,631,089 Zm00001d014629 GRMZM2G307400 hb44 Homeobox-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 56,627,074 56,628,308 Zm00001d028304 GRMZM2G126808 hb45 Homeobox-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 29,830,012 29,832,203 Zm00001d044081 GRMZM2G126239 hb46 Homeobox-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 218,481,322 218,485,402 Zm00001d038811 GRMZM2G474656 hb47 Homeobox-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,911,115 164,915,840 Zm00001d042864 GRMZM2G154641 hb48 Homeobox-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 182,383,771 182,388,532 Zm00001d033005 GRMZM2G097349 hb49 Homeobox-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 246,790,551 246,792,861 Zm00001d027991 GRMZM2G132367 hb5 Homeobox-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 19,584,556 19,586,616 Zm00001d008869 AC187157.4_FG005 hb52 Homeobox-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 23,362,875 23,368,001 Zm00001d002754 GRMZM2G044752 hb53 Homeobox-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,690,129 21,691,754 Zm00001d005951 GRMZM2G041127 hb54 Homeobox-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 193,728,105 193,730,506 Zm00001d020046 GRMZM2G126170 hb55 Homeobox-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 88,533,002 88,549,660 Zm00001d050834 GRMZM2G047715 hb56 Homeobox-transcription factor 56 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 125,421,188 125,423,374 Zm00001d004234 GRMZM2G060444 hb57 Homeobox-transcription factor 57 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 94,228,544 94,231,577 Zm00001d005875 GRMZM2G366130 hb59 Homeobox-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 191,461,110 191,462,620 Zm00001d053151 GRMZM2G458728 hb6 Homeobox-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 216,317,487 216,322,672 Zm00001d036118 GRMZM2G068672 hb60 Homeobox-transcription factor 60 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 72,944,758 72,946,052 Zm00001d047995 GRMZM2G105834 hb62 Homeobox-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 147,605,077 147,607,285 Zm00001d027802 GRMZM2G004641 hb64 Homeobox-transcription factor 64 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 13,863,300 13,867,102 Zm00001d034515 GRMZM2G151266 hb65 Homeobox-transcription factor 65 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 295,313,706 295,336,499 Zm00001d002799 GRMZM2G351330 hb66 Homeobox-transcription factor 66 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,972,434 22,973,879 Zm00001d001948 GRMZM2G047448 hb67 Homeobox-transcription factor 67 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,416,796 3,418,004 Zm00001d032681 GRMZM2G469551 hb69 Homeobox-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 234,066,734 234,078,059 Zm00001d050310 GRMZM2G122076 hb7 Homeobox-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 80,432,810 80,437,142 Zm00001d025964 GRMZM2G396527 hb70 Homeobox-transcription factor 70 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,976,903 134,978,448 Zm00001d018225 GRMZM2G145690 hb71 Homeobox-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 216,949,284 216,953,293 Zm00001d024410 GRMZM2G170958 hb73 Homeobox-transcription factor 73 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 69,483,649 69,484,945 Zm00001d002234 GRMZM2G001289 hb75 Homeobox-transcription factor 75 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 8,463,903 8,470,216 Zm00001d038355 GRMZM2G125976 hb76 Homeobox-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,172,016 155,176,200 Zm00001d045398 GRMZM2G134260 hb77 Homeobox-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,631,978 20,633,771 Zm00001d029934 GRMZM2G148074 hb78 Homeobox-transcription factor 78 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 95,220,121 95,221,774 Zm00001d034212 GRMZM2G135447 hb8 Homeobox-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 286,887,707 286,896,784 Zm00001d036510 GRMZM5G830671 hb81 Homeobox-transcription factor 81 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 90,930,027 90,931,239 Zm00001d052133 GRMZM2G126646 hb83 Homeobox-transcription factor 83 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 180,558,735 180,563,266 Zm00001d031182 GRMZM2G099319 hb84 Homeobox-transcription factor 84 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 181,575,354 181,579,654 Zm00001d009802 GRMZM2G008286 hb86 Homeobox-transcription factor 86 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 82,152,551 82,155,226 Zm00001d046405 GRMZM2G163641 hb87 Homeobox-transcription factor 87 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 87,582,999 87,584,881 Zm00001d043076 GRMZM2G038252 hb88 Homeobox-transcription factor 88 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 188,444,921 188,448,749 Zm00001d012751 GRMZM2G351018 hb9 Homeobox-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 179,755,488 179,769,766 Zm00001d050487 GRMZM2G419252 hb90 Homeobox-transcription factor 90 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 92,644,355 92,646,442 Zm00001d026351 GRMZM2G122897 hb91 Homeobox-transcription factor 91 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,099,075 144,105,329 Zm00001d007525 GRMZM2G318412 hb93 Homeobox-transcription factor 93 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 233,973,935 233,975,586 Zm00001d004230 GRMZM2G438260 hb96 Homeobox-transcription factor 96 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 94,054,835 94,067,869 Zm00001d014201 GRMZM5G803812 hb98 Homeobox-transcription factor 98 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 36,222,862 36,225,042 Zm00001d043915 GRMZM2G159357 hb99 Homeobox-transcription factor 99 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 213,742,292 213,756,288 Zm00001d016298 GRMZM2G161435 hbtf2 Homeobox-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 156,109,006 156,112,456 Zm00001d003913 GRMZM5G898735 hcf106 high chlorophyll fluorescence106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 66,964,007 66,969,688 Zm00001d025267 GRMZM2G151529 hcf106c high chlorophyll fluorescence106c Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 111,824,838 111,828,519 Zm00001d043201 GRMZM2G002165 hcf148 high chlorophyll fluorescence148 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr3 191,430,494 191,436,524 Zm00001d028901 GRMZM2G121960 hcf3 high chlorophyll fluorescence3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Hammani et al 2012 Chr1 50,190,087 50,200,187 Zm00001d026697 GRMZM2G038013 hcf60 high chlorophyll fluorescence60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr10 150,284,617 150,285,015 Zm00001d050150 GRMZM2G030628 hcp101a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 69,407,277 69,429,725 Zm00001d053919 GRMZM2G060669 hcp101b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,647,953 243,651,842 Zm00001d027946 GRMZM2G061806 hct1 hydroxycinnamoyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al.,2015 Chr1 18,086,164 18,087,981 Zm00001d012274 GRMZM2G034360 hct10 hydroxycinnamoyltransferase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 171,718,376 171,721,067 Zm00001d020530 GRMZM2G156296 hct11 hydroxycinnamoyltransferase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models called hct11 per Erich Grotewold Chr7 121,046,188 121,056,362 Zm00001d031893 GRMZM2G179703 hct12 hydroxycinnamoyltransferase12 Chr1 205,617,823 205,620,362 Zm00001d032527 GRMZM2G129266 hct13 hydroxycinnamoyltransferase13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 229,515,984 229,517,919 Zm00001d027948 GRMZM2G114918 hct2 hydroxycinnamoyltransferase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al.,2015 Chr1 18,147,157 18,148,937 Zm00001d037073 GRMZM2G127251 hct3 hydroxycinnamoyltransferase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al.,2015 Chr6 111,482,487 111,483,803 Zm00001d030542 GRMZM2G030436 hct4 hydroxycinnamoyltransferase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al.,2015 Chr1 142,569,190 142,571,156 Zm00001d003129 GRMZM2G158083 hct5 hydroxycinnamoyltransferase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al.,2015 Chr2 33,327,793 33,333,386 Zm00001d017186 GRMZM2G035584 hct6 hydroxycinnamoyltransferase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 188,273,103 188,277,915 Zm00001d039840 AC215260.3_FG003 hct7 hydroxycinnamoyltransferase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al.,2015 Chr3 16,366,920 16,369,185 Zm00001d039956 GRMZM2G178769 hct8 hydroxycinnamoyltransferase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al.,2015 Chr3 20,568,290 20,571,434 Zm00001d032148 GRMZM2G131165 hct9 hydroxycinnamoyltransferase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al.,2015 Chr1 214,491,081 214,496,190 Zm00001d003813 GRMZM2G119703 hda102 histone deacetylase Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF440228 Chr2 60,626,145 60,637,075 Zm00001d050139 GRMZM2G136067 hda108 histone deacetylase Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 68,410,505 68,416,118 Zm00001d006780 GRMZM2G457889 hda109 histone deacetylase Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU952105 Chr2 216,491,788 216,503,386 Zm00001d018864 GRMZM2G107309 hda110 histone deacetylase Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 541972 Chr7 7,675,154 7,687,966 Zm00001d017139 GRMZM2G137409 hds1 hydroxymethylbutenyl diphosphate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models GBWI-67591 (MaizeCyc), GRMZM2G137409 Chr5 186,706,299 186,712,746 Zm00001d011139 GRMZM2G100146 hdt102 histone deacetylase102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 140,120,555 140,123,091 Zm00001d038832 GRMZM2G159032 hdt103 histone deacetylase103 Chr6 165,376,374 165,379,007 Zm00001d012092 GRMZM5G898314 hdt104 histone deacetylase 104 from sequence DY532002 Chr8 168,113,678 168,117,049 Zm00001d018863 GRMZM2G107457 hen1 hua enhancer1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from FJ910136 Chr7 7,668,475 7,673,706 Zm00001d039512 GRMZM2G104081 hex1 hexokinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU971594 & Zhou et al., 2014; Zhang et al., 2014 Chr3 6,248,365 6,252,317 Zm00001d038792 GRMZM2G432801 hex2 hexokinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU972171 & Zhou et al., 2014; Zhang et al., 2014 Chr6 164,389,095 164,395,441 Zm00001d010796 GRMZM2G058745 hex3 hexokinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT068218 & Zhou et al., 2014; Zhang et al., 2014 Chr8 128,039,610 128,045,077 Zm00001d042146 GRMZM2G068913 hex4 hexokinase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2014; Zhang et al., 2014 Chr3 153,564,761 153,570,791 Zm00001d043511 GRMZM5G856653 hex5 hexokinase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2014; Zhang et al., 2014 Chr3 202,355,009 202,361,480 Zm00001d043607 GRMZM2G171373 hex6 hexokinase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2014; Zhang et al., 2014 Chr3 204,995,530 205,005,583 Zm00001d037689 GRMZM2G051806 hex7 hexokinase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2014; Zhang et al., 2014 Chr6 134,063,370 134,066,401 Zm00001d037861 GRMZM2G046686 hex8 hexokinase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2014; Zhang et al., 2014 Chr6 140,078,685 140,083,862 Zm00001d011889 GRMZM2G467069 hex9 hexokinase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2014; Zhang et al., 2014 Chr8 164,038,137 164,044,860 Zm00001d005230 GRMZM2G304548 hfi1 corn-activated Hageman factor inhibitor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 164,746,346 164,746,813 Zm00001d046558 GRMZM2G173358 hggt1 homogentisate geranylgeranyl transferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Likka et al 2013 Chr9 95,895,575 95,899,061 Zm00001d006387 GRMZM2G410644 hggt2 homogentisate geranylgeranyltransferase3 Chr2 206,364,249 206,367,453 Zm00001d039491 GRMZM5G848876 hggt3 homogentisate geranylgeranyltransferase3 Chr3 5,766,074 5,768,360 Zm00001d050265 GRMZM2G117755 hir1 hypersensitive induced reaction1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 77,232,457 77,236,007 Zm00001d005648 GRMZM2G150762 hir2 hypersensitive induced response2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez gene 541820 Chr2 181,901,483 181,904,315 Zm00001d039173 GRMZM2G070659 hir3 hypersensitive induced reaction3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 171,777,021 171,780,090 Zm00001d018981 GRMZM2G401308 his1a histone1a Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AW060063 Chr7 11,773,225 11,774,574 Zm00001d047787 GRMZM2G305046 his2a1 histone2A1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 141,785,644 141,786,727 Zm00001d020580 GRMZM2G071959 his2b1 histone2b1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 123,664,001 123,664,456 Zm00001d050100 GRMZM2G119071 his2b2 histone2b2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 65,618,139 65,618,591 Zm00001d005789 GRMZM2G057852 his2b3 histone 2B3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez gene 100274242 Chr2 188,710,662 188,711,219 Zm00001d042930 GRMZM2G306258 his2b4 histone 2B4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene Chr3 184,418,117 184,418,903 Zm00001d051591 GRMZM2G342515 his2b5 histone 2B5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU970863 Chr4 163,976,517 163,976,981 Zm00001d025913 GRMZM2G046841 his2b6 Chr10 133,665,354 133,665,806 Zm00001d017977 GRMZM2G151223 hk1 histidine kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to sequence accession AB042270 Chr5 211,161,703 211,171,628 Zm00001d042312 GRMZM2G471529 hk2 histidine kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to sequence accession AB102956 Chr3 160,473,898 160,480,245 Zm00001d014297 GRMZM2G158252 hk3 histidine kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to sequence accession AB102957 Chr5 40,021,551 40,049,955 Zm00001d033786 GRMZM2G155767 hk4 histidine kinase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 273,671,338 273,678,008 Zm00001d046928 GRMZM2G025579 hk5 histidine kinase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 111,174,328 111,183,242 Zm00001d051812 GRMZM2G125943 hk6 histidine kinase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 170,321,473 170,328,486 Zm00001d031802 GRMZM5G881887 hm1 Helminthosporium carbonum susceptibility1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 202,214,939 202,217,025 Zm00001d046811 GRMZM2G086773 hm2 Helminthosporium carbonum susceptibility2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 106,801,933 106,804,839 Zm00001d027405 GRMZM2G136859 hma1 heavy metal associated1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,536,701 4,538,190 Zm00001d014858 GRMZM5G834758 hmg1 high mobility group protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 65,680,729 65,683,012 Zm00001d031233 AC186524.3_FG005 hmg101 HMG-transcription factor 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,947,174 182,951,362 Zm00001d006306 GRMZM2G162284 hmg103 HMG-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 204,114,307 204,116,336 Zm00001d036355 GRMZM2G150348 hmg11 HMG-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,387,744 85,388,687 Zm00001d037615 GRMZM5G842484 hmg12 HMG-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 131,885,556 131,892,995 Zm00001d021433 GRMZM2G066528 hmg13 HMG-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 152,095,387 152,097,351 Zm00001d017555 GRMZM2G013821 hmg2 high mobility group box protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT041105; hmg10 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,470,076 199,472,102 Zm00001d051427 GRMZM2G156785 hmg3 high mobility group protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models From: Entrez Gene Chr4 158,189,751 158,191,758 Zm00001d043946 GRMZM2G024247 hmg4 HMG-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 214,388,200 214,392,378 Zm00001d051142 GRMZM2G144398 hmg5 HMG-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 145,646,263 145,647,300 Zm00001d016082 GRMZM2G060253 hmg9 HMG-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 143,463,525 143,465,976 Zm00001d032239 GRMZM2G106133 hmga102 high mobility group family A 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ131371 & AF291748 Chr1 218,500,155 218,501,623 Zm00001d048060 GRMZM6G310687 hmt1 homocysteine S-methyltransferase 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 149,093,185 149,097,158 Zm00001d043302 GRMZM2G039166 hmt4 homocysteine S-methyltransferase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF297047 Chr3 195,189,435 195,191,634 Zm00001d014304 GRMZM2G074804 hnh1 HNH endonuclease domain-containing protein1 Chr5 40,355,253 40,362,818 Zm00001d036894 GRMZM2G043277 ho2 heme oxygenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from chr 6 hit of EU962994 (Shi et al., 2013) Chr6 105,839,573 105,842,396 Zm00001d046493 GRMZM2G157936 ho3 heme oxygenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from second chr 9 hit of EU962994 (Shi et al., 2013) Chr9 92,349,534 92,350,909 Zm00001d002601 GRMZM2G080274 hon101 histone one (H1) 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene 541973 Chr2 16,461,905 16,462,911 Zm00001d013066 GRMZM2G121221 hon106a histone H1 106a aligns to AI737183 accession associated with RFLP probe Chr5 4,147,202 4,148,651 Zm00001d034479 GRMZM2G164020 hon110 histone one (H1) Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (Oct 2013) Chr1 294,118,392 294,119,816 Zm00001d010758 GRMZM2G136369 hox1 homeobox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from X67561 (chr 8); hb103 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr8 127,166,352 127,183,436 Zm00001d038812 GRMZM2G094935 hox2 homeobox2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X67561 (chr 6 hit); hb92 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,961,618 164,983,809 Zm00001d043452 GRMZM2G314546 hox3 homeobox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY109382 & assigned by the Grassius project, (Yilmaz et al 2009) to hb32 Chr3 200,451,086 200,464,251 Zm00001d031961 GRMZM2G016439 hp1 histidine-containing phosphotransfer protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (2013) Chr1 208,050,358 208,053,463 Zm00001d005344 GRMZM2G014154 hp2 histidine-containing phosphotransfer protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene Chr2 170,204,369 170,207,404 Zm00001d049952 GRMZM2G451604 hp3 histidine-containing phosphotransfer protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 55,175,484 55,178,540 Zm00001d054067 GRMZM6G986387 hpl1 hydroperoxide lyase1 from alignment to sequence AY540745 Chr4 245,806,161 245,807,669 Zm00001d015356 GRMZM2G088396 hppd1 4-hydroxyphenylpyruvate dioxygenase 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 86,084,655 86,086,755 Zm00001d046909 GRMZM2G048472 hpt1 homogentisate phytyltransferase1 Chr9 110,047,719 110,058,786 Zm00001d007581 GRMZM2G015285 hrbp1 harpin binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100383635 Chr2 235,123,301 235,124,690 GRMZM2G168651 hrg1 hydroxyproline rich glycoprotein1 from alignment with M36912, M36913 and M36914 Chr2 55,391,917 55,393,690 Zm00001d004689 GRMZM2G085924 hsbp1 herbicide safener binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 131,242,393 131,243,911 Zm00001d045724 GRMZM2G065355 hsbp2 heat shock factor binding protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene 100283717 Chr9 35,182,183 35,184,071 Zm00001d046913 GRMZM2G139082 hscf1 heat shock complementing factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 110,228,864 110,232,333 Zm00001d005888 GRMZM2G002131 hsftf1 HSF-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 191,778,849 191,782,862 Zm00001d021263 GRMZM2G165272 hsftf10 HSF-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 147,163,459 147,165,213 Zm00001d034433 GRMZM2G133023 hsftf11 HSF-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,905,093 292,912,832 Zm00001d046204 GRMZM2G173090 hsftf12 HSF-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 71,750,080 71,751,360 Zm00001d027757 GRMZM2G165972 hsftf13 HSF-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,714,065 12,716,389 Zm00001d028269 GRMZM2G118485 hsftf14 HSF-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 28,714,876 28,733,871 Zm00001d038746 AC206165.3_FG007 hsftf15 HSF-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 163,786,743 163,788,401 Zm00001d010812 AC205471.4_FG003 hsftf16 HSF-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 128,602,960 128,604,732 Zm00001d033987 GRMZM2G003489 hsftf17 HSF-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 280,368,696 280,370,932 Zm00001d016255 GRMZM2G105348 hsftf18 HSF-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 153,717,773 153,719,275 Zm00001d029270 AC216247.3_FG001 hsftf19 HSF-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 64,404,103 64,407,052 Zm00001d005843 GRMZM2G088242 hsftf2 HSF-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 190,605,384 190,606,902 Zm00001d026094 GRMZM2G301485 hsftf20 HSF-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 138,304,690 138,305,939 Zm00001d020714 GRMZM2G139535 hsftf21 HSF-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 129,797,898 129,801,599 Zm00001d012823 GRMZM2G384339 hsftf22 HSF-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 925,235 928,518 Zm00001d044168 GRMZM2G089525 hsftf23 HSF-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 220,964,949 220,966,074 Zm00001d032923 GRMZM2G010871 hsftf24 HSF-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 243,208,029 243,211,663 Zm00001d011406 GRMZM2G086880 hsftf25 HSF-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,667,369 149,668,532 Zm00001d022295 GRMZM2G025685 hsftf27 HSF-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 174,697,653 174,700,664 Zm00001d046299 GRMZM2G118047 hsftf28 HSF-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 79,124,493 79,126,324 Zm00001d016520 GRMZM2G179802 hsftf29 HSF-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 165,944,432 165,950,570 Zm00001d044259 GRMZM2G005815 hsftf3 HSF-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 223,146,310 223,151,904 Zm00001d018941 GRMZM2G125969 hsftf4 HSF-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,991,664 9,995,513 Zm00001d034886 GRMZM2G115456 hsftf5 HSF-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 304,715,056 304,719,918 Zm00001d016674 GRMZM2G059851 hsftf6 HSF-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,180,319 172,183,764 Zm00001d052738 GRMZM2G098696 hsftf7 HSF-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 199,404,178 199,405,434 Zm00001d031736 GRMZM2G164909 hsftf8 HSF-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 200,197,812 200,199,489 Zm00001d048041 GRMZM2G026742 hsftf9 HSF-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 148,611,010 148,615,970 Zm00001d012420 GRMZM2G310431 hsp1 heat shock protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 174,179,964 174,183,186 Zm00001d038806 GRMZM2G360681 hsp101 heat-shock protein 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 164,808,309 164,812,048 Zm00001d039935 GRMZM2G422240 hsp17.2 heat shock protein17.2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU968243 & X65725 Chr3 19,868,724 19,869,483 Zm00001d047548 GRMZM2G404249 hsp18a 18 kda heat shock protein18a Gene model association inferred from similarity with B73 RefGen_v3 gene models gene model GRMZM2G056857 on RefGen_v1 corresponds to the gene model GRMZM2G404249 on RefGen_v2; also from BT070148 Chr9 134,965,867 134,966,361 Zm00001d008841 GRMZM2G034157 hsp18c heat shock protein18c Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 22,307,488 22,307,982 Zm00001d039566 GRMZM2G083810 hsp18f heat shock protein18f Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 8,104,720 8,105,217 Zm00001d052194 GRMZM2G007729 hsp22 heat shock protein22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 182,772,609 182,773,786 Zm00001d028408 GRMZM2G149647 hsp26 heat shock protein26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 33,789,050 33,790,182 Zm00001d018641 GRMZM6G199466 hsp3 heat shock protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 1,462,744 1,464,165 Zm00001d041550 GRMZM2G340251 hsp70-4 heat shock protein70-4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 126,862,145 126,865,908 Zm00001d024903 GRMZM5G833699 hsp90 heat shock protein, 90 kDa Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v3 alignment to sequence accession S59780.1 Chr10 93,908,317 93,911,235 Zm00001d012749 GRMZM2G118453 hstf2 heat shock transcription factor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) to hstf26 Chr8 179,671,303 179,673,854 Zm00001d011629 GRMZM2G164612 htn1 Helminthosporium turcicum resistanceN1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Closest homolog to Htn1 in B73; Hurni et al., 2015 Chr8 156,763,311 156,774,071 Zm00001d045296 GRMZM5G852396 hvp1 human viral protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 18,165,498 18,165,851 Zm00001d034033 GRMZM5G815323 hxa102 histone acetyltransferase complex component102 Chr1 281,631,722 281,642,943 Zm00001d026056 GRMZM2G152135 hyd3 hydroxylase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY844957 Chr10 137,257,366 137,260,572 Zm00001d002589 GRMZM2G164318 hyd4 hydroxylase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from GQ131287 Chr2 16,287,469 16,289,962 Zm00001d048469 GRMZM2G382534 hyd5 hydroxylase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from DR817188 Chr9 156,850,438 156,852,802 Zm00001d027443 GRMZM5G826824 hyd6 hydroxylase6 v4 Chr1 5,463,952 5,466,250 Zm00001d053795 GRMZM2G163683 hyd7 hydroxylase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT040337 Chr4 241,260,118 241,261,991 Zm00001d027443 GRMZM5G826824 hyd8 hydroxylase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr1 5,463,952 5,466,250 Zm00001d045192 GRMZM2G304378 hyp1 hybrid proline-rich protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 15,720,802 15,728,927 Zm00001d027495 GRMZM2G137367 iaa1 Aux/IAA-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,556,059 6,558,427 Zm00001d041416 GRMZM2G138268 iaa10 Aux/IAA-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 118,101,071 118,105,468 Zm00001d041418 GRMZM2G167794 iaa11 Aux/IAA-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 118,360,550 118,362,225 Zm00001d043515 GRMZM2G057067 iaa12 Aux/IAA-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 202,396,755 202,399,107 Zm00001d049141 GRMZM2G031615 iaa14 Aux/IAA-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,575,403 17,583,311 Zm00001d049143 GRMZM2G148188 iaa15 Aux/IAA-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,662,558 17,664,405 Zm00001d049715 GRMZM2G059544 iaa16 Aux/IAA-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 41,271,800 41,273,024 Zm00001d050972 GRMZM2G390691 iaa17 Aux/IAA-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 134,412,097 134,423,581 Zm00001d051911 GRMZM2G142768 iaa18 Aux/IAA-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 174,427,408 174,429,846 Zm00001d013071 GRMZM2G152796 iaa19 Aux/IAA-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,310,449 4,311,941 Zm00001d030993 GRMZM2G079957 iaa2 Aux/IAA-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 172,413,967 172,415,265 Zm00001d013154 AC195340.3_FG004 iaa20 Aux/IAA-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,503,823 5,508,576 Zm00001d013302 GRMZM2G077356 iaa21 Aux/IAA-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 8,065,262 8,071,957 Zm00001d013707 GRMZM2G128421 iaa22 Aux/IAA-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,196,300 18,197,763 Zm00001d016277 GRMZM2G121309 iaa23 Aux/IAA-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 155,417,891 155,421,796 Zm00001d018414 GRMZM2G030465 iaa24 Aux/IAA-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 220,284,286 220,285,517 Zm00001d000288 GRMZM2G000158 iaa25 Aux/IAA-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg104 67,198 68,824 Zm00001d036918 GRMZM2G079200 iaa26 Aux/IAA-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 106,378,038 106,379,735 Zm00001d037774 GRMZM2G147243 iaa28 Aux/IAA-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 137,231,049 137,234,466 Zm00001d038175 GRMZM2G141205 iaa29 Aux/IAA-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,542,749 150,543,931 Zm00001d033319 GRMZM2G366373 iaa3 Aux/IAA-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 258,878,226 258,879,592 Zm00001d038784 GRMZM2G074427 iaa30 Aux/IAA-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,332,917 164,336,272 GRMZM2G149449 iaa31 Aux/IAA-transcription factor 31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,398,079 9,398,800 Zm00001d018973 GRMZM2G115357 iaa32 Aux/IAA-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 11,248,578 11,249,882 Zm00001d021279 GRMZM2G048131 iaa33 Aux/IAA-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 147,725,357 147,726,867 Zm00001d008201 GRMZM5G853479 iaa34 Aux/IAA-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 989,823 991,128 Zm00001d009532 GRMZM2G573324 iaa36 Aux/IAA-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 69,164,642 69,168,927 Zm00001d010360 GRMZM2G359924 iaa37 Aux/IAA-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 111,039,047 111,041,287 Zm00001d010411 GRMZM2G035465 iaa38 Aux/IAA-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 113,492,914 113,496,509 Zm00001d033976 GRMZM2G159285 iaa4 Aux/IAA-transcription factor4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,923,057 279,925,806 Zm00001d044818 GRMZM2G435290 iaa40 Aux/IAA-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 3,871,449 3,874,530 Zm00001d045203 GRMZM2G001799 iaa41 Aux/IAA-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 15,993,040 15,994,740 Zm00001d024008 GRMZM2G479834 iaa42 Aux/IAA-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 36,379,483 36,384,610 Zm00001d025989 GRMZM2G134517 iaa43 Aux/IAA-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,487,493 135,492,026 Zm00001d026480 GRMZM2G143352 iaa44 Aux/IAA-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,721,094 146,722,100 Zm00001d034463 GRMZM5G809195 iaa5 Aux/IAA-transcription factor5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 293,749,001 293,752,408 Zm00001d004697 GRMZM5G825707 iaa6 Aux/IAA-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 131,929,878 131,937,148 Zm00001d039513 GRMZM2G104176 iaa7 Aux/IAA-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,287,613 6,290,045 Zm00001d039624 GRMZM2G004696 iaa8 Aux/IAA-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,366,940 9,370,004 Zm00001d040541 GRMZM2G074742 iaa9 Aux/IAA-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,775,678 48,777,774 Zm00001d033580 GRMZM2G024131 iaglu1 indol-3-ylacetyl glucosyl transferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: L34847 Chr1 267,761,424 267,763,217 Zm00001d012180 GRMZM2G133806 ial1 ig1-as2 like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU962641; assigned by the Grassius project to ldb40 (Yilmaz et al 2009) Chr8 169,618,708 169,621,826 Zm00001d047808 GRMZM2G063151 ibp1 initiator binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X79085 Chr9 142,331,350 142,336,894 Zm00001d028608 GRMZM2G110309 ibp2 initiator-binding protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 40,713,008 40,718,506 Zm00001d021666 GRMZM2G056369 icl1 isocitrate lyase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT040479 Chr7 159,493,893 159,495,965 Zm00001d020220 GRMZM2G022837 ics1 isochorismate synthase like1 from alignment of cDNA EU957632 Chr7 100,663,432 100,666,790 Zm00001d032922 GRMZM2G011357 id1 indeterminate growth1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 243,201,405 243,204,865 Zm00001d035308 idc1 iron deficiency candidate1 v4 Chr6 20,483,349 20,484,802 Zm00001d021403 GRMZM2G042666 idd7 indeterminate1 domain7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY754865 Chr7 151,211,055 151,215,873 Zm00001d031992 GRMZM2G179677 iddp1 indeterminate domain p1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY754867 Chr1 208,942,917 208,950,782 Zm00001d017560 GRMZM2G090595 iddp10 indeterminate domain p10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY754864 Chr5 199,613,954 199,621,606 Zm00001d011487 GRMZM2G432128 idh1 isocitrate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT043437 Chr8 152,072,966 152,077,705 Zm00001d039079 GRMZM5G829778 idh2 isocitrate dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT038585 Chr6 169,685,197 169,688,921 Zm00001d023299 GRMZM5G822449 IDP103 Chr10 2,352,030 2,356,262 Zm00001d026084 GRMZM5G845601 IDP120 Chr10 138,077,230 138,079,896 Zm00001d026163 GRMZM2G091534 IDP134 Chr10 140,143,158 140,146,819 Zm00001d023384 GRMZM2G031317 IDP1448 Chr10 4,335,098 4,336,256 Zm00001d023583 GRMZM2G005848 IDP1458 Chr10 10,822,456 10,840,261 Zm00001d048091 GRMZM2G321725 IDP1465 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 149,914,247 149,918,405 GRMZM2G158526 IDP148 Chr6 155,443,675 155,448,220 Zm00001d029078 GRMZM2G043493 IDP1489 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 57,267,805 57,269,655 Zm00001d025221 GRMZM2G148547 IDP1615 Chr10 109,828,651 109,831,426 Zm00001d012820 GRMZM2G019695 IDP1619 Chr5 848,901 851,867 Zm00001d021624 GRMZM2G154574 IDP1657 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 158,312,986 158,322,909 Zm00001d031315 GRMZM2G113726 IDP1951 Chr1 185,871,254 185,874,831 Zm00001d023426 GRMZM2G164113 IDP2353 Chr10 5,284,902 5,291,881 Zm00001d038196 GRMZM2G121514 IDP2375 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,266,841 151,271,722 Zm00001d025939 GRMZM2G155543 IDP2392 Chr10 134,160,823 134,164,469 Zm00001d034640 GRMZM2G061662 IDP2440 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,682,827 298,693,357 Zm00001d025413 GRMZM2G043737 IDP245 Chr10 117,927,675 117,931,068 GRMZM2G353822 IDP2454 Chr8 124,537,076 124,538,244 Zm00001d025352 GRMZM2G095826 IDP2458 Chr10 115,194,757 115,195,221 Zm00001d025010 GRMZM2G143725 IDP2556 Chr10 99,533,913 99,544,932 Zm00001d024933 GRMZM2G164538 IDP2561 Chr10 95,587,713 95,593,434 Zm00001d012314 GRMZM2G061043 IDP257 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 172,325,977 172,333,899 Zm00001d025017 GRMZM2G177182 IDP2579 Chr10 99,817,486 99,819,538 Zm00001d023371 GRMZM5G803318 IDP258 Chr10 4,190,680 4,193,349 Zm00001d026193 GRMZM2G128057 IDP263 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,677,876 140,680,877 Zm00001d026647 GRMZM2G093623 IDP361 Chr10 149,345,776 149,364,298 Zm00001d006797 GRMZM2G042981 IDP363 Chr2 216,892,700 216,916,575 Zm00001d025884 GRMZM2G080199 IDP372 Chr10 132,881,662 132,883,539 Zm00001d036334 GRMZM2G103266 IDP441 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 84,736,095 84,742,496 Zm00001d043904 GRMZM2G327189 IDP472 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU977091 Chr3 213,449,817 213,451,294 Zm00001d024311 GRMZM2G029307 IDP475 Chr10 63,453,244 63,457,463 Zm00001d024318 GRMZM2G046861 IDP48 Chr10 64,146,988 64,156,247 Zm00001d025997 GRMZM2G016939 IDP507 Chr10 135,684,027 135,687,837 Zm00001d016816 GRMZM2G093716 IDP51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 177,054,357 177,058,283 Zm00001d024633 GRMZM5G828229 IDP52 Chr10 81,347,903 81,352,638 Zm00001d025016 GRMZM2G177203 IDP524 Chr10 99,815,796 99,824,932 Zm00001d024865 GRMZM5G807276 IDP582 Chr10 91,161,061 91,164,736 Zm00001d025628 GRMZM2G134539 IDP620 Chr10 124,513,574 124,517,653 Zm00001d025509 GRMZM2G096695 IDP774 Chr10 120,876,061 120,876,869 Zm00001d005295 GRMZM5G874167 IDP825 Chr2 168,137,133 168,145,157 Zm00001d044816 GRMZM2G110832 IDP844 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 3,595,060 3,596,502 Zm00001d028554 GRMZM2G481529 IDPC175 Chr1 38,993,551 38,998,358 Zm00001d028216 GRMZM2G088309 ifa1 indeterminate floral apex1 Gene model association inferred from similarity with B73 RefGen_v3 gene models yab2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 26,771,165 26,776,231 Zm00001d042560 GRMZM2G118250 ig1 indeterminate gametophyte1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 171,820,603 171,823,900 Zm00001d034460 GRMZM2G046191 igl1 indole-3-glycerol phosphate lyase1 from alignment of cDNA AF271384 Chr1 293,615,920 293,621,281 Zm00001d020008 GRMZM2G106950 igps1 indole-3-glycerolphosphate synthase1 Chr7 85,218,743 85,225,209 Zm00001d025652 igps2 indole-3-glycerolphosphate synthase2 Chr10 125,102,974 125,107,740 Zm00001d024393 GRMZM2G145870 igps3 indole-3-glycerolphosphate synthase3 Chr10 68,584,698 68,594,748 Zm00001d020971 GRMZM2G004583 ij1 iojap striping1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 138,210,336 138,221,164 Zm00001d042530 GRMZM2G017077 im30p1 IM30 protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 170,938,371 170,943,460 Zm00001d028735 GRMZM2G173251 imd1 isopropylmalate dehydrogenase1 chr 1 alignment to 7C03E11 Chr1 44,718,501 44,719,536 Zm00001d002880 GRMZM5G803490 imd2 isopropylmalate dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU968951 Chr2 25,546,609 25,550,239 Zm00001d026675 GRMZM2G104613 imd3 isopropylmalate dehydrogenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models ENTREZ GENE Chr10 149,745,849 149,749,481 Zm00001d008244 GRMZM2G120857 imd4 isopropylmalate dehydrogenase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models chr 8 aligment with 7C03E11 Chr8 2,452,376 2,459,944 Zm00001d009850 GRMZM2G088088 imp1 importin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 85,065,908 85,071,126 Zm00001d019170 GRMZM2G042733 in1 intensifier1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 20,105,168 20,111,095 Zm00001d016708 GRMZM2G139300 incw1 cell wall invertase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 173,403,817 173,408,283 Zm00001d025355 GRMZM2G123633 incw3 invertase cell wall3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 115,297,049 115,299,501 Zm00001d001941 GRMZM2G119941 incw4 invertase cell wall4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF043347 Chr2 3,201,231 3,204,850 Zm00001d025354 GRMZM2G095725 incw5 invertase cell wall5 Chr10 115,243,957 115,246,970 Zm00001d001944 GRMZM2G018692 incw6 invertase cell wall6 Chr2 3,244,741 3,247,431 Zm00001d001943 GRMZM2G018716 incw7 invertase cell wall7 Chr2 3,240,579 3,242,932 Zm00001d041991 GRMZM2G174249 incw8 invertase cell wall8 Chr3 146,847,940 146,851,037 Zm00001d017503 GRMZM2G112914 inp1 inaperturate pollen1 Chr5 197,730,625 197,735,534 Zm00001d051666 GRMZM2G136139 invan1 invertase alkaline neutral1 Chr4 166,118,999 166,121,899 Zm00001d040735 GRMZM2G084694 invan10 invertase alkaline neutral10 Chr3 60,817,984 60,822,374 Zm00001d016768 GRMZM2G118737 invan2 invertase alkaline neutral2 Chr5 175,327,307 175,331,417 Zm00001d050716 GRMZM2G170842 invan3 invertase alkaline neutral3 Chr4 118,325,912 118,331,112 Zm00001d053017 GRMZM2G007277 invan4 invertase alkaline neutral4 Chr4 209,242,258 209,246,990 Zm00001d004804 GRMZM2G115451 invan5 invertase alkaline neutral5 Chr2 140,341,974 140,345,724 Zm00001d015094 GRMZM2G477236 invan6 invertase alkaline neutral6 Chr5 75,259,001 75,273,721 Zm00001d028926 GRMZM2G084940 invan7 invertase alkaline neutral7 Chr1 51,754,552 51,764,566 Zm00001d050645 GRMZM2G040843 invan8 invertase alkaline neutral8 Chr4 109,286,090 109,296,510 Zm00001d009177 GRMZM2G022782 invan9 invertase alkaline neutral9 Chr8 41,086,584 41,090,905 Zm00001d029683 GRMZM2G434500 ipe1 irregular pollen exine1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr1 82,567,028 82,569,436 Zm00001d021709 GRMZM2G108285 ippi1 isopentenyl pyrophosphate isomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence. Chr7 160,908,408 160,912,025 Zm00001d010274 GRMZM2G145029 ippi2 isopentenyl pyrophosphate isomerase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence. Chr8 106,962,806 106,966,802 Zm00001d038193 GRMZM2G133082 ippi3 isopentenyl pyrophosphate isomerase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence. Chr6 151,176,435 151,181,930 Zm00001d042935 GRMZM5G843352 ips1 induced by phosphate starvation1 overlaps, but opposit orientation Chr3 184,486,585 184,487,381 Zm00001d041982 GRMZM2G097258 ipt1 isopentenyl transferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from NM_001127724 Chr3 146,545,493 146,548,229 Zm00001d036339 GRMZM2G102915 ipt10 isopentenyl transferase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU797192 and from homology to rice IPT10 acces# AB239807 Chr6 84,773,604 84,774,833 Zm00001d003869 GRMZM2G084462 ipt2 isopentenyl transferase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU263126 Chr2 64,103,998 64,104,966 Zm00001d011618 GRMZM2G393014 ipt3 isopentenyl transferase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models based on location given in Vyroubalova et al. 2009 Chr8 156,198,746 156,199,792 Zm00001d043812 GRMZM2G415751 ipt3B isopentenyl transferase3B Gene model association inferred from similarity with B73 RefGen_v3 gene models based on location given in Vyroubalova et al. 2009 Chr3 210,777,669 210,778,733 Zm00001d019171 GRMZM2G104559 ipt4 isopentenyl transferase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Gene ID: 100158230 Chr7 20,132,013 20,133,107 Zm00001d013021 AC210013.4_FG005 ipt5 isopentenyl transferase5 from EU263128 Chr5 3,407,648 3,408,661 Zm00001d034584 GRMZM2G116878 ipt6 isopentenyl transferase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU263129 Chr1 297,077,046 297,078,035 Zm00001d040810 GRMZM2G436770 ipt7 isopentenyl transferase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU263130 Chr3 67,403,313 67,404,371 Zm00001d038921 GRMZM2G025429 ipt8 isopentenyl transferase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU263131 Chr6 166,949,706 166,950,815 Zm00001d005239 GRMZM2G018046 ipt9 isopentenyl transferase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from primer sequence in Vyroubalova et al., 2009 Chr2 165,340,406 165,341,449 Zm00001d040173 AC226235.2_FG001 irl1 isoflavone reductase-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 30,593,009 30,594,535 Zm00001d020799 GRMZM2G150796 iso3 isoamylase-type starch debranching enzyme3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 133,232,803 133,244,605 Zm00001d025286 GRMZM2G023194 isp1 iron-sulfur protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: M77224 Chr10 112,660,019 112,662,739 Zm00001d026148 GRMZM5G803874 isr1 inhibitor of striate1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 139,803,834 139,806,665 Zm00001d002830 GRMZM2G394450 ivr1 invertase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 24,145,621 24,150,188 Zm00001d014947 GRMZM2G089836 ivr2 invertase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 69,452,584 69,455,758 Zm00001d054075 GRMZM2G463871 ivr3 invertase3 Chr4 245,956,890 245,959,339 Zm00001d034606 GRMZM2G465553 iws1 IWS1/SPN1-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 297,653,338 297,656,301 Zm00001d012993 GRMZM2G108716 iws2 IWS1/SPN1-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,874,875 2,878,453 Zm00001d035561 GRMZM2G050412 jac1 jacalin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics project (Oct 2013) Chr6 33,193,521 33,195,150 Zm00001d009396 GRMZM2G142964 jmj1 JUMONJI-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 62,195,436 62,201,240 Zm00001d037803 GRMZM2G044301 jmj10 JUMONJI-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 138,208,458 138,215,829 Zm00001d012119 GRMZM2G339379 jmj11 JUMONJI-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,442,999 168,449,985 Zm00001d054070 GRMZM2G054162 jmj12 JUMONJI-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 245,864,833 245,876,851 Zm00001d052933 GRMZM2G078198 jmj13 JUMONJI-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 205,274,822 205,277,906 Zm00001d030108 GRMZM2G057466 jmj14 JUMONJI-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 106,180,425 106,186,974 Zm00001d017700 GRMZM2G060919 jmj15 JUMONJI-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,553,720 204,562,336 Zm00001d014422 GRMZM2G180086 jmj16 JUMONJI-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 45,956,643 45,962,835 Zm00001d029392 GRMZM2G152877 jmj17 JUMONJI-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 68,668,722 68,675,980 Zm00001d042447 GRMZM2G321810 jmj18 JUMONJI-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 168,081,519 168,087,932 Zm00001d018647 GRMZM2G108589 jmj19 JUMONJI-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 1,619,886 1,623,205 Zm00001d051964 GRMZM2G171163 jmj2 JUMONJI-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,484,595 175,495,683 Zm00001d048404 AC149475.2_FG005 jmj20 JUMONJI-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 155,670,062 155,681,591 Zm00001d051849 GRMZM2G383210 jmj21 JUMONJI-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,182,519 172,202,452 Zm00001d033158 GRMZM2G417089 jmj22 JUMONJI-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,436,182 252,443,465 Zm00001d047491 GRMZM2G428933 jmj3 JUMONJI-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 132,259,431 132,268,397 Zm00001d051965 GRMZM2G027075 jmj4 JUMONJI-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,517,244 175,528,400 Zm00001d020367 GRMZM2G070885 jmj5 JUMONJI-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 109,762,337 109,767,776 Zm00001d051959 GRMZM2G107109 jmj6 JUMONJI-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,347,420 175,358,199 Zm00001d037313 GRMZM2G156910 jmj7 JUMONJI-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 120,389,101 120,407,827 Zm00001d023788 GRMZM2G431157 jmj8 JUMONJI-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 20,294,622 20,305,450 Zm00001d051961 GRMZM2G140524 jmj9 JUMONJI-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,383,401 175,397,333 Zm00001d032249 GRMZM2G056400 kan1 KANADI1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 218,790,654 218,795,894 Zm00001d050350 GRMZM2G175827 kan3 kanadi3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 82,930,195 82,941,888 Zm00001d047830 GRMZM2G089803 kao2 kaurenoic acid oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nelissen, et al. 2012 Chr9 142,669,294 142,672,793 Zm00001d001928 GRMZM2G070273 kcbp1 kinesin-like calmodulin binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: XM_008670512 Chr2 3,067,705 3,079,031 Zm00001d044056 GRMZM2G022915 kch1 potassium channel 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment to RefGen_v2 by cDNA Y07632 gi 2104907 Chr3 218,044,053 218,050,489 Zm00001d038252 GRMZM2G020859 kch2 potassium channel2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Y09747 (chr 6 hit) Chr6 152,420,069 152,431,280 Zm00001d053446 GRMZM2G081666 kch3 potassium channel3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 231,900,509 231,904,788 Zm00001d039386 GRMZM2G093313 kch4 potassium channel4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of cDNA AJ558238 gi 34576238 to B73 RefGen_v2 Chr3 3,100,278 3,104,395 Zm00001d011473 GRMZM2G171279 kch5 potassium channel5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by alignment of cDNA Y07632 gi 2104907 on RefGen_v2 Chr8 151,507,871 151,513,696 Zm00001d010210 AC234152.1_FG007 kch6 potassium channel6 Chr8 104,156,555 104,161,455 Zm00001d016160 GRMZM2G178356 kch7 potassium channel7 Gao et al., 2017 Chr5 147,708,234 147,712,414 Zm00001d012717 GRMZM5G838773 kch8 potassium channel8 Gao et al., 2017 Chr8 179,106,798 179,113,012 Zm00001d009554 GRMZM2G119256 kds1 CMP-KDO synthetase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 70,012,280 70,015,464 Zm00001d043705 GRMZM2G159948 kelp1 p15 (PC4 Sub1)-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 207,917,857 207,926,660 Zm00001d016803 GRMZM2G090213 kelp2 p15 (PC4 Sub1)-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 176,578,339 176,584,546 Zm00001d011680 GRMZM2G112535 kelp3 p15 (PC4 Sub1)-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 158,512,216 158,527,236 Zm00001d021729 GRMZM5G889999 kik1 kinase interacting kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U82481 Chr7 161,576,147 161,582,076 Zm00001d022630 GRMZM2G158394 kin1 knotted1 induced1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU955694 Chr7 181,798,165 181,799,397 Zm00001d033379 GRMZM2G163761 kip1 knotted interacting protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 261,077,259 261,078,842 Zm00001d033859 GRMZM2G017087 kn1 knotted1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 276,073,335 276,081,242 Zm00001d027431 GRMZM2G159431 knox1 knotted related homeobox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by Gramene; confirmed by alignment to protein sequence at proper map location (Mar 2012) Chr1 5,123,182 5,127,784 Zm00001d013560 GRMZM2G002225 knox10 knotted related homeobox10 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of protein sequence AAB33489 (Mar 2012) Chr5 14,346,333 14,347,197 Zm00001d046568 GRMZM2G055243 knox2 knotted related homeobox2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 96,269,799 96,278,036 Zm00001d033861 GRMZM2G000743 knox3 knotted related homeobox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 276,344,334 276,366,296 Zm00001d035439 GRMZM5G832409 knox5 knotted related homeobox5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 25,561,769 25,573,225 Zm00001d015549 GRMZM2G370332 knox6 knotted related homeobox6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene 100383874; hb79 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr5 96,925,401 96,928,976 Zm00001d053749 GRMZM2G433591 knox7 knotted related homeobox7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AM182385 Chr4 240,414,100 240,417,560 Zm00001d046344 GRMZM2G059308 ko1 kaurene oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT042205 Chr9 81,994,757 82,001,394 Zm00001d046342 GRMZM2G161472 ko2 kaurene oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EZ104608 Chr9 81,729,257 81,733,312 Zm00001d019169 GRMZM2G042627 kpp1 kinase associated protein phosphatase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From U81960 and HQ858748; assigned to fha16 by the Grassius project, (Yilmaz et al 2009) Chr7 20,089,932 20,104,098 Zm00001d043628 GRMZM2G161868 kri1 ketol-acid reductoisomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 205,574,876 205,576,863 Zm00001d009638 kri2 ketol-acid reductoisomerase2 alignment with AY103782 & T15312 in v4 Chr8 73,989,684 73,993,106 Zm00001d051308 GRMZM2G129569 krp1 kinesin-related protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 152,675,908 152,682,127 Zm00001d018624 GRMZM2G436981 krp11 kinesin-related protein11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 1,247,292 1,253,741 Zm00001d033112 GRMZM2G034828 krp13 kinesin-related protein13 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF272758 Chr1 250,446,439 250,452,170 Zm00001d025951 GRMZM2G054418 krp15 kinesin-related protein15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 134,563,080 134,575,911 Zm00001d012763 GRMZM2G124883 krp16 kinesin-related protein16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 180,226,489 180,258,297 Zm00001d027337 GRMZM2G092232 krp17 kinesin heavy chain17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,224,423 3,230,647 Zm00001d045554 GRMZM2G136838 krp2 kinesin-related protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 26,632,900 26,639,701 Zm00001d010790 GRMZM2G173700 krp3 kinesin-related protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 127,852,075 127,860,775 Zm00001d031943 GRMZM2G320689 krp4 kinesin-related protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 207,690,177 207,696,620 Zm00001d036987 GRMZM2G575566 krp5 kinesin-related protein5 Chr6 108,388,200 108,395,354 Zm00001d049938 GRMZM2G132371 krp8 kinesin-related protein8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 54,069,553 54,076,899 Zm00001d037599 GRMZM5G881464 krp9 kinesin-related protein9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF272756 Chr6 131,075,168 131,092,642 Zm00001d032858 GRMZM2G016922 ks1 kaurene synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT067769 Chr1 240,465,118 240,471,300 Zm00001d002350 GRMZM2G093526 ks2 kaurene synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT042236 Chr2 10,686,293 10,689,881 Zm00001d002349 GRMZM2G093603 ks3 kaurene synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Nelissen et al 2012 Table S2 Chr2 10,674,198 10,679,341 Zm00001d041082 AC214360.3_FG001 ks4 kaurene synthase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT054450 Chr3 96,077,271 96,081,198 Zm00001d024514 ks5 kaurene synthase5 v4 Chr10 75,446,562 75,449,964 Zm00001d049957 GRMZM2G391312 ks6 kaurene synthase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AFW61735 (Fu et al., 2015) Chr4 55,492,468 55,496,164 Zm00001d036698 GRMZM2G177169 l15 luteus15 Gene model association inferred from similarity with B73 RefGen_v3 gene models rom B73_v2 alignment to cDNA FJ490677.1 GI:218684530 (July 2011) Chr6 98,069,169 98,071,529 Zm00001d049174 GRMZM2G135019 la1 lazy plant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Dong et al., 2013 Chr4 19,153,020 19,159,545 Zm00001d042848 GRMZM5G842071 lac1 laccase1 Chr3 181,947,006 181,957,835 Zm00001d048759 GRMZM2G140527 lac10 laccase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Rius et al., 2016 Chr4 5,033,268 5,035,828 Zm00001d038371 GRMZM2G146152 lac2 laccase2 Chr6 155,675,685 155,678,583 Zm00001d052243 GRMZM2G169033 lac3 laccase3 Chr4 184,464,169 184,467,579 Zm00001d042906 GRMZM2G072780 lac4 laccase4 Chr3 183,578,027 183,581,417 Zm00001d042901 GRMZM2G367668 lac5 laccase5 Chr3 183,398,638 183,401,429 GRMZM2G164467 lac6 laccase6 Chr1 260,132,427 260,135,902 Zm00001d027678 GRMZM2G092483 lbd1 LBD-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 10,986,933 10,988,125 Zm00001d033335 GRMZM2G154320 lbd10 LBD-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 259,429,013 259,429,858 Zm00001d033347 GRMZM2G017319 lbd11 LBD-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 259,828,724 259,831,189 Zm00001d033466 GRMZM2G447176 lbd12 LBD-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 263,448,597 263,450,323 Zm00001d034384 GRMZM2G011385 lbd13 LBD-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 291,492,379 291,492,970 Zm00001d006739 GRMZM2G177110 lbd14 LBD-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 215,644,201 215,645,366 Zm00001d007919 AC207888.3_FG009 lbd15 LBD-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 242,414,840 242,416,891 Zm00001d040004 GRMZM2G132693 lbd17 LBD-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 22,562,754 22,564,198 Zm00001d041205 AC218973.3_FG003 lbd18 LBD-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 105,360,314 105,361,141 Zm00001d043036 GRMZM2G092517 lbd20 LBD-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 187,095,368 187,096,814 Zm00001d043311 GRMZM2G025758 lbd21 LBD-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 195,854,423 195,855,820 Zm00001d048889 GRMZM2G095982 lbd22 LBD-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 7,192,147 7,193,388 Zm00001d050269 GRMZM2G079768 lbd23 LBD-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 77,463,528 77,464,649 Zm00001d051891 GRMZM2G075499 lbd24 LBD-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 173,818,577 173,819,660 Zm00001d052317 GRMZM2G025989 lbd25 LBD-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 186,984,558 187,006,976 Zm00001d013625 GRMZM2G079185 lbd26 LBD-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 15,732,403 15,735,219 Zm00001d013732 GRMZM2G362627 lbd27 LBD-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,855,513 18,856,412 Zm00001d035498 GRMZM2G165805 lbd28 LBD-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 29,567,724 29,568,516 Zm00001d036032 GRMZM2G386095 lbd29 LBD-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 67,441,712 67,442,299 Zm00001d028413 GRMZM2G110913 lbd3 LBD-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 34,109,298 34,111,567 Zm00001d036435 GRMZM2G180319 lbd30 LBD-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 88,337,769 88,338,425 Zm00001d038013 GRMZM2G044150 lbd31 LBD-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 145,148,378 145,149,283 Zm00001d038197 GRMZM2G121487 lbd32 LBD-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,277,845 151,283,466 Zm00001d038717 GRMZM2G386674 lbd33 LBD-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 163,280,343 163,281,305 Zm00001d018832 GRMZM2G704330 lbd34 LBD-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 6,806,891 6,808,735 Zm00001d009823 GRMZM5G868471 lbd35 LBD-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 83,961,158 83,963,468 Zm00001d010264 GRMZM2G096064 lbd36 LBD-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 106,551,052 106,551,980 Zm00001d010749 AC234149.1_FG002 lbd37 LBD-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 126,702,595 126,703,446 Zm00001d010751 GRMZM2G073044 lbd38 LBD-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 126,849,996 126,850,937 Zm00001d010978 AC214648.3_FG005 lbd39 LBD-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,743,207 135,743,999 Zm00001d028721 GRMZM2G021095 lbd4 LBD-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 44,340,623 44,341,737 Zm00001d047752 GRMZM2G145568 lbd41 LBD-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 140,901,122 140,902,338 Zm00001d047921 GRMZM2G150594 lbd42 LBD-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 145,465,257 145,467,375 Zm00001d023316 GRMZM5G873586 lbd44 LBD-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,854,293 2,860,135 Zm00001d029506 GRMZM2G060544 lbd5 LBD-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 73,706,673 73,707,614 Zm00001d029602 GRMZM2G044902 lbd6 LBD-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 78,655,181 78,656,079 Zm00001d030364 GRMZM2G076327 lbd7 LBD-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 126,597,854 126,599,207 Zm00001d031544 GRMZM2G132667 lbd8 LBD-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 193,781,401 193,782,215 Zm00001d032286 AC217910.3_FG006 lbd9 LBD-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 220,463,004 220,464,263 Zm00001d003760 GRMZM6G851663 lbp1 lipid binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Forestan et al., 2016 Chr2 57,804,441 57,805,296 Zm00001d014944 GRMZM2G128929 ldh1 lactate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Z11754 Chr5 69,327,618 69,329,422 Zm00001d042212 GRMZM2G106613 ldp1 luminidependens protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: W21755 Chr3 156,127,890 156,138,007 Zm00001d017898 GRMZM2G011789 lec1 LEC1 transcription factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models in silico, MS 2011 Chr5 209,724,572 209,725,408 Zm00001d035700 GRMZM2G174883 leg1 legumin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT042037 Chr6 41,696,312 41,698,431 Zm00001d034192 AC234157.1_FG002 lem1 lethal embryo mutant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 286,208,841 286,210,899 Zm00001d029074 GRMZM2G044074 les22 lesion22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 57,250,815 57,254,236 Zm00001d002005 GRMZM2G036297 lg1 liguleless1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 4,230,854 4,234,535 Zm00001d042777 GRMZM2G060216 lg2 liguleless2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 179,387,727 179,396,447 Zm00001d040611 GRMZM2G087741 lg3 liguleless3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 53,767,845 53,777,713 Zm00001d010948 GRMZM2G094241 lg4 liguleless4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 134,760,586 134,766,141 Zm00001d045945 GRMZM2G134382 lgn1 liguleless narrow1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Moon et al, 2013 Chr9 48,527,705 48,530,228 Zm00001d006663 GRMZM2G038519 lhca1 light harvesting complex A1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100191715 Chr2 213,805,344 213,811,979 Zm00001d044399 GRMZM2G104549 lhcb1 light harvesting chlorophyll a/b binding protein1 Chr3 227,152,688 227,153,783 Zm00001d011285 GRMZM2G351977 lhcb10 light harvesting chlorophyll a/b binding protein10 Chr8 145,825,712 145,826,506 Zm00001d021435 AC207722.2_FG009 lhcb2 light harvesting chlorophyll a/b binding protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 152,283,433 152,284,280 Zm00001d009589 GRMZM2G155216 lhcb3 light harvesting chlorophyll a/b binding protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 71,899,226 71,900,023 Zm00001d018157 GRMZM2G103101 lhcb4 light harvesting complex a/b protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T18807 Chr5 215,693,591 215,695,288 Zm00001d007267 GRMZM2G149428 lhcb5 light harvesting chlorophyll a/b binding protein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 226,141,607 226,143,698 Zm00001d026599 GRMZM2G092427 lhcb6 light harvesting chlorophyll a/b binding protein6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U23190 Chr10 148,715,856 148,717,059 Zm00001d039040 GRMZM2G402936 lhcb7 light harvesting complex mesophyll7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 169,030,660 169,031,891 Zm00001d033136 GRMZM2G018627 lhcb9 light harvesting chlorophyll binding protein9 Gene model association inferred from similarity with B73 RefGen_v3 gene models lhcb9 specific Chr1 251,754,657 251,755,894 Zm00001d024546 GRMZM2G474769 lhy1 late hypocotyl elongation protein ortholog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Ko et al, 2016 Chr10 77,700,138 77,703,390 Zm00001d045537 GRMZM2G042323 lim101 Chr9 25,841,071 25,846,296 Zm00001d046916 GRMZM2G055273 lim166 Chr9 110,415,245 110,418,645 Zm00001d023757 GRMZM2G068316 lim2 Chr10 18,993,063 18,996,474 Zm00001d020177 GRMZM2G027041 lim333 Chr7 97,680,746 97,682,402 Zm00001d028975 GRMZM2G033519 lim432 Chr1 53,393,407 53,405,238 Zm00001d028550 GRMZM2G128206 limtf1 LIM-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 38,975,759 38,978,074 Zm00001d035304 GRMZM2G004959 limtf10 LIM-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 20,284,434 20,286,443 Zm00001d035844 GRMZM2G017845 limtf11 LIM-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 55,321,293 55,329,245 Zm00001d037252 GRMZM2G010960 limtf12 LIM-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 118,129,957 118,140,120 Zm00001d047837 GRMZM2G151934 limtf13 LIM-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 142,882,570 142,887,070 Zm00001d025926 GRMZM2G024887 limtf14 LIM-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 133,898,724 133,900,553 Zm00001d028567 GRMZM2G160198 limtf2 LIM-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,386,655 39,389,622 Zm00001d030360 GRMZM2G385236 limtf3 LIM-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 125,946,475 125,946,717 Zm00001d030953 GRMZM2G099328 limtf4 LIM-transcription factor 4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 168,697,730 168,709,504 Zm00001d033297 GRMZM2G342105 limtf5 LIM-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 258,038,207 258,048,636 Zm00001d002844 GRMZM2G153268 limtf6 LIM-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 24,434,066 24,435,780 Zm00001d041725 GRMZM2G175761 limtf7 LIM-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 135,291,605 135,293,112 Zm00001d051262 GRMZM2G134752 limtf8 LIM-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 151,028,968 151,030,729 Zm00001d017382 GRMZM2G170034 limtf9 LIM-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 193,930,984 193,932,787 Zm00001d035440 GRMZM2G448607 lip15 low temperature-induced protein15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 25,657,757 25,658,164 Zm00001d052079 GRMZM2G181362 lkrsdh1 lysine-ketoglutarate reductase/saccharopine dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 178,764,555 178,775,799 Zm00001d027656 GRMZM2G339563 lls1 lethal leaf spot1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 10,261,506 10,265,855 Zm00001d036982 GRMZM2G169089 ln1 linoleic acid1 Gene model association inferred from similarity with B73 RefGen_v3 gene models allelism with dgat1 (Classical Gene from: EU039830) Chr6 108,212,462 108,219,350 Zm00001d021301 GRMZM2G109560 lon1 LON peptidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 148,264,574 148,273,453 Zm00001d022560 GRMZM2G113056 lon2 LON protease2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 180,055,178 180,064,698 Zm00001d047135 GRMZM2G072886 lop1 lo1 pI allergen homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene & from: L14271 Chr9 119,578,065 119,583,754 Zm00001d042541 GRMZM2G156861 lox1 lipoxygenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 171,421,717 171,425,401 Zm00001d053675 GRMZM2G015419 lox10 lipoxygenase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Christensen et al., 2015 Chr4 238,805,319 238,809,230 Zm00001d015852 GRMZM2G009479 lox11 lipoxygenase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ335769 Chr5 126,372,618 126,376,084 Zm00001d041204 GRMZM2G106748 lox12 lipoxygenase12 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ335770 Chr3 105,356,377 105,359,732 Zm00001d031449 GRMZM5G822593 lox13 lipoxygenase13 Chr1 190,316,537 190,321,767 Zm00001d042540 lox2 lipoxygenase2 Chr3 171,277,704 171,281,453 Zm00001d033623 GRMZM2G109130 lox3 lipoxygenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 269,047,817 269,052,874 Zm00001d033624 GRMZM2G109056 lox4 lipoxygenase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ335762 Chr1 269,056,560 269,072,120 Zm00001d013493 GRMZM2G102760 lox5 lipoxygenase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ335763 Chr5 12,701,180 12,706,156 Zm00001d002000 GRMZM2G040095 lox6 lipoxygenase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ335764 Chr2 4,150,293 4,154,404 Zm00001d025524 GRMZM2G070092 lox7 lipoxygenase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ335765 Chr10 121,268,606 121,272,616 Zm00001d027893 GRMZM2G017616 lox9 lipoxygenase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics project (10-2013) Chr1 16,948,608 16,955,122 Zm00001d028180 GRMZM2G155242 lpa1 low phytic acid1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 25,632,515 25,636,718 Zm00001d030083 GRMZM2G456626 lpa2 low phytic acid2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 104,172,633 104,173,661 Zm00001d033929 GRMZM2G361593 lpa3 low phytic acid3 from AY772410 Chr1 278,737,384 278,740,927 Zm00001d033585 GRMZM5G858417 lpe1 leaf permease1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr1 267,905,764 267,909,606 Zm00001d008489 GRMZM2G064750 lrk1 Ser/Thr receptor-like kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 10,002,314 10,006,242 Zm00001d011843 GRMZM2G077752 lrp1 lateral root primordia1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 162,564,729 162,565,898 Zm00001d012294 AC232238.2_FG004 lrs1 liguleless related sequence1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY180107; assigned by the Grassius project, (Yilmaz et al 2009) to bzip90 Chr8 172,035,363 172,043,591 Zm00001d027934 GRMZM2G153393 ltk1 leucine-rich transmembrane protein kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,945,836 17,961,550 Zm00001d048247 GRMZM2G330907 ltk2 leucine-rich transmembrane protein kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 153,133,300 153,141,644 Zm00001d038913 GRMZM2G320373 ltp1 lipid transfer protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Forestan et al., 2016 Chr6 166,868,333 166,868,629 Zm00001d044433 GRMZM2G361398 lug1 leunig-related1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr3 227,870,356 227,884,703 Zm00001d018460 GRMZM2G079013 lug2 leunig-related2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr5 221,195,976 221,208,870 Zm00001d034929 GRMZM2G036169 lug3 leunig-related3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr1 305,907,516 305,922,174 Zm00001d032754 GRMZM2G097640 lug4 leunig-related4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr1 237,444,154 237,451,532 Zm00001d040689 GRMZM2G037683 lug5 leunig-related5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 58,288,839 58,305,955 Zm00001d004383 GRMZM2G149708 lug6 leunig-related6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr2 107,689,269 107,709,950 Zm00001d049621 GRMZM2G111247 lug7 leunig-related7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr4 37,864,782 37,871,773 Zm00001d035194 GRMZM2G061186 lug8 leunig-related8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr6 8,811,527 8,823,988 Zm00001d033896 GRMZM2G027059 lw1 lemon white1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Based on data for zb7 from Lu et al. 2012 Chr1 277,726,512 277,729,830 Zm00001d011210 GRMZM2G012966 lyce1 lycopene epsilon cyclase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Transcript 03 seems to be the correct one for lyce1. Transcript 01 appears to be associated with some other gene product. Chr8 143,020,695 143,027,838 AC195147.3_FG001 mab1 math-btb1 Juranic et al., 2012 Chr7 168,147,615 168,148,658 Zm00001d001767 GRMZM2G154437 mab10 math-btb10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr2 259,078 260,187 Zm00001d033082 GRMZM2G077428 mab11 math-btb11 Juranic et al., 2012 Chr1 249,893,707 249,894,822 Zm00001d033082 GRMZM2G181276 mab12 math-btb12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr1 249,893,707 249,894,822 Zm00001d000387 GRMZM2G027688 mab13 math-btb13 Juranic et al., 2012 B73V4_ctg42 27,125 28,246 Zm00001d007888 GRMZM2G052985 mab14 math-btb14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr2 241,783,414 241,790,911 Zm00001d022366 GRMZM2G148213 mab15 math-btb15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr7 176,169,913 176,179,943 Zm00001d007068 GRMZM2G172210 mab16 math-btb16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr2 221,312,374 221,317,785 Zm00001d013094 GRMZM2G166049 mab17 math-btb17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr5 4,676,461 4,680,208 Zm00001d034400 GRMZM2G060765 mab18 math-btb18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr1 291,832,067 291,835,875 Zm00001d018887 GRMZM2G074323 mab19 math-btb19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al. 2012 Chr7 8,354,405 8,360,116 Zm00001d031550 GRMZM2G404188 mab2 math-btb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr1 193,924,906 193,925,964 Zm00001d046968 GRMZM2G009724 mab20 math-btb20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr9 113,501,318 113,502,412 Zm00001d019441 GRMZM2G109738 mab21 math-btb21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr7 33,981,164 33,982,216 Zm00001d023740 GRMZM2G046238 mab22 math-btb22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr10 18,189,171 18,190,277 Zm00001d036641 GRMZM2G143782 mab23 math-btb23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al. 2012 Chr6 95,981,467 95,983,819 Zm00001d036643 GRMZM2G103251 mab24 math-btb24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr6 95,997,155 95,998,900 Zm00001d036646 GRMZM2G088086 mab25 math-btb25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr6 96,107,181 96,108,854 Zm00001d036647 GRMZM2G161610 mab26 math-btb26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr6 96,204,324 96,208,206 Zm00001d024349 GRMZM2G161569 mab27 math-btb27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr10 66,046,841 66,047,920 Zm00001d024351 GRMZM2G041963 mab28 math-btb28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr10 66,123,261 66,124,322 Zm00001d024915 GRMZM2G077951 mab29 math-btb29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr10 94,800,906 94,803,266 Zm00001d031549 GRMZM2G337139 mab3 math-btb3 Juranic et al., 2012 Chr1 193,854,782 193,874,626 Zm00001d033258 GRMZM2G319215 mab30 math-btb30 Juranic et al., 2012 Chr1 256,312,163 256,313,242 Zm00008a006240 mab31 math-btb31 PH207 chr2 7,994,778 7,995,320 Zm00001d049774 GRMZM2G081441 mab4 math-btb4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr4 44,116,832 44,117,869 Zm00001d049781 GRMZM2G372171 mab5 math-btb5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr4 44,222,586 44,228,786 Zm00001d049777 GRMZM2G125162 mab6 math-btb6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr4 44,198,235 44,199,308 Zm00001d032943 GRMZM2G110531 mab7 math-btb7 Juranic et al., 2012 Chr1 244,208,939 244,210,054 Zm00001d014165 GRMZM2G418031 mab8 math-btb8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr5 34,767,311 34,768,429 Zm00001d048843 GRMZM2G574887 mab9 math-btb9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Juranic et al., 2012 Chr4 6,233,384 6,234,460 Zm00001d023681 GRMZM2G027522 mac1 multiple archesporial cells1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 15,208,539 15,211,365 Zm00001d048474 GRMZM2G171365 mads1 MADS1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 156,960,598 156,980,213 Zm00001d019213 GRMZM2G472100 mads13 MADS-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 22,103,625 22,104,431 Zm00001d006668 GRMZM2G337892 mads17 MADS-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,897,891 213,899,273 Zm00001d016957 GRMZM2G492156 mads19 MADS-transcription factor 19 v4; merges two v3 gene models Chen et al., 2014 Chr5 181,259,012 181,273,855 Zm00001d018587 GRMZM2G137387 mads20 MADS-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 223,789,445 223,791,111 Zm00001d019189 AC233912.1_FG001 mads21 MADS-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 20,850,901 20,853,619 Zm00001d032218 GRMZM2G052045 mads22 MADS-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 217,578,240 217,578,964 Zm00001d048894 GRMZM2G099408 mads25 MADS-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 7,243,833 7,244,576 Zm00001d017932 GRMZM2G044408 mads26 MADS-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,273,759 210,285,475 Zm00001d003168 GRMZM2G135018 mads27 MADS-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 34,340,843 34,342,956 Zm00001d047742 GRMZM2G128953 mads28 MADS-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 140,438,118 140,443,638 Zm00001d018667 GRMZM2G072582 mads3 MADS3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,191,954 2,203,098 Zm00001d025479 GRMZM2G069370 mads30 MADS-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,092,000 120,093,934 Zm00001d049692 GRMZM2G105387 mads32 MADS-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 40,462,578 40,464,305 Zm00001d024389 GRMZM2G459864 mads33 MADS-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 68,369,718 68,370,476 Zm00001d023736 GRMZM2G137510 mads34 MADS-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 18,031,501 18,037,018 Zm00001d043589 GRMZM2G079727 mads36 MADS-transcription factor 36` Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 204,487,153 204,491,765 Zm00001d037212 GRMZM2G334225 mads38 MADS-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,059,964 116,066,361 Zm00001d050897 GRMZM2G055782 mads39 MADS-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 128,983,979 129,000,129 Zm00001d034045 GRMZM2G032339 mads4 MADS-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 282,136,174 282,165,980 Zm00001d048697 GRMZM2G441115 mads40 MADS-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 3,464,266 3,467,995 Zm00001d042591 GRMZM2G018589 mads41 MADS-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 172,998,409 173,003,728 Zm00001d011323 GRMZM2G375707 mads42 MADS-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 146,669,804 146,671,210 Zm00001d011748 GRMZM2G001139 mads43 MADS-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 160,706,837 160,710,739 Zm00001d035053 GRMZM2G117961 mads45 MADS-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 3,271,721 3,274,263 Zm00001d009198 GRMZM2G306610 mads46 MADS-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 42,153,439 42,154,794 Zm00001d046053 GRMZM2G099577 mads47 MADS-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 60,326,844 60,327,584 Zm00001d031591 GRMZM2G148220 mads48 MADS-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,617,659 195,621,721 Zm00001d037126 GRMZM2G038878 mads50 MADS-transcription factor 50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 113,374,115 113,374,909 GRMZM2G161666 mads51 MADS-transcription factor 51 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,656,696 93,658,911 Zm00001d052648 GRMZM2G446426 mads52 MADS-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,797,119 195,798,103 Zm00001d042550 GRMZM2G035092 mads53 MADS-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 171,520,606 171,521,172 Zm00001d039913 GRMZM2G320549 mads54 MADS-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 19,194,748 19,210,804 Zm00001d041587 GRMZM2G137289 mads55 MADS-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 128,474,269 128,474,787 GRMZM2G470857 mads57 MADS-transcription factor 57 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,431,756 19,432,706 Zm00001d038015 GRMZM2G073357 mads58 MADS-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 145,193,067 145,193,978 Zm00001d009628 AC234185.1_FG006 mads59 MADS-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 73,835,260 73,836,112 Zm00001d044850 GRMZM2G152415 mads60 MADS-transcription factor 60 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 5,086,712 5,091,020 Zm00001d007891 GRMZM5G878490 mads62 MADS-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 241,885,780 241,886,358 Zm00001d003409 GRMZM2G032905 mads63 MADS-transcription factor 63 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 43,566,862 43,569,682 Zm00001d013792 GRMZM5G853066 mads64 MADS-transcription factor 64 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 20,265,968 20,266,804 Zm00001d016650 AC212823.4_FG003 mads65 MADS-transcription factor 65 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 171,256,543 171,262,010 Zm00001d016791 GRMZM5G839969 mads66 MADS-transcription factor 66 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 176,044,354 176,045,217 Zm00001d022088 GRMZM2G147716 mads67 MADS-transcription factor 67 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 169,844,061 169,849,722 Zm00001d027957 GRMZM2G059102 mads68 MADS-transcription factor 68 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 18,299,864 18,321,135 Zm00001d042315 GRMZM2G171650 mads69 MADS-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 160,591,489 160,591,701 Zm00001d039080 GRMZM5G891280 mads70 MADS-transcription factor 70 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 169,689,637 169,690,380 Zm00001d046323 GRMZM2G110582 mads71 MADS-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 80,353,775 80,367,413 Zm00001d018142 GRMZM2G046885 mads73 MADS-transcription factor 73 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 215,341,246 215,348,037 Zm00001d044899 GRMZM5G814279 mads74 MADS-transcription factor 74 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 6,706,712 6,706,927 Zm00001d019214 GRMZM2G472096 mads75 MADS-transcription factor 75 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 22,114,577 22,115,458 Zm00001d047356 GRMZM2G070034 mads76 MADS-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 127,436,185 127,437,918 Zm00001d031625 GRMZM2G098986 mads77 MADS-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 196,773,083 196,773,325 Zm00001d002332 GRMZM2G005155 mads9 MADS-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 10,488,890 10,496,373 Zm00001d048123 GRMZM2G479245 maf1 MFP1 attachment factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 150,498,053 150,498,481 Zm00001d003247 GRMZM2G102183 mas1 malate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542252 Chr2 37,815,902 37,818,424 Zm00001d035115 GRMZM5G870170 mate1 multidrug and toxic compound extrusion1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to sequence accession FJ015157 (MS Mar 2013) Chr6 5,904,499 5,909,575 Zm00001d013810 GRMZM2G170128 mate2 multidrug and toxic compound extrusion2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to sequence accession FJ873684 Chr5 21,182,817 21,186,548 Zm00001d028228 GRMZM2G163154 mate3 multidrug and toxic compound extrusion3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guimaraes et al., 2014 Chr1 27,284,568 27,293,763 Zm00001d040665 GRMZM2G080450 mate4 multidrug and toxic compound extrusion4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guimaraes et al., 2014 Chr3 57,044,875 57,051,682 Zm00001d005080 GRMZM5G890665 mate5 multidrug and toxic compound extrusion5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guimaraes et al., 2014 Chr2 157,613,247 157,617,354 Zm00001d015060 GRMZM2G065154 mate6 multidrug and toxic compound extrusion6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guimaraes et al., 2014 Chr5 73,779,553 73,787,141 Zm00001d029412 GRMZM2G471240 matl1 matrilineal1 Kelliher et al., 2017 Chr1 69,428,973 69,430,785 Zm00001d010322 GRMZM2G040131 mbd101 methyl binding domain101 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY029556 Chr8 109,537,444 109,549,673 Zm00001d041290 GRMZM2G476933 mbd105 methyl binding domain105 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY029558 Chr3 110,647,125 110,652,889 Zm00001d031101 GRMZM2G022365 mbd106 methyl binding domain106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 177,235,739 177,243,001 Zm00001d020975 GRMZM2G168269 mbd108 methyl binding domain108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 138,262,824 138,266,459 GRMZM2G112679 mbd109 methyl binding domain109 from: AF527618 Chr5 16,320,354 16,321,171 Zm00001d006046 GRMZM2G025095 mbd111 methyl binding domain111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 196,379,947 196,403,384 Zm00001d025128 GRMZM2G126545 mbd113 methyl binding domain113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 105,638,368 105,648,955 Zm00001d033204 GRMZM2G157470 mbd115 methyl binding domain115 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY863051 Chr1 254,163,170 254,168,845 Zm00001d005958 GRMZM2G048411 mbd117 methyl binding domain117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 193,814,484 193,820,330 Zm00001d031268 GRMZM2G301098 mbd119 methyl binding domain119 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 184,422,806 184,436,805 Zm00001d038164 GRMZM2G069254 mbd120 methyl binding domain120 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY029556 (chr 6 hit) Chr6 150,068,990 150,075,970 Zm00001d026288 GRMZM2G119802 mbd123 methyl binding domain123 Chr10 142,887,361 142,891,016 Zm00001d049320 GRMZM2G101480 mbf1 multi-protein bridging factor homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 26,180,699 26,183,398 Zm00001d005793 GRMZM2G060429 mc1 mucronate1 low confidence model GRMZM2G518638 overlaps, but in opposite orientation Chr2 188,849,023 188,849,574 Zm00001d016299 GRMZM2G161299 mcf1 mitochondrial carrier family protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zallot et al 2013 Chr5 156,137,453 156,146,644 Zm00001d011226 GRMZM2G420119 mcf2 mitochrondrial carrier family protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zallot et al 2013 Chr8 143,745,669 143,749,054 Zm00001d046583 GRMZM5G805627 mch1 maize CRY1 homolog1 Chr9 97,236,468 97,238,511 Zm00001d000120 GRMZM2G069762 mch2 maize CRY1 homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg142 542,642 545,404 Zm00001d036565 GRMZM2G100462 mch3 maize CRY1 homolog3 Chr6 92,667,282 92,669,971 Zm00001d014462 GRMZM5G882378 mch4 maize CRY1 homolog4 Chr5 48,439,969 48,442,067 Zm00001d030614 GRMZM2G065205 mcm1 minichromosome maintenance1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 148,687,296 148,692,171 Zm00001d041606 GRMZM2G112074 mcm2 minichromosome maintenance2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Studer et al., 2017 Chr3 129,567,273 129,572,209 Zm00001d044540 GRMZM2G066101 mcm4 minichromosome maintenance4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 231,327,721 231,332,840 Zm00001d018384 GRMZM2G075978 mcm5 minichromosome maintenance5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 219,713,468 219,718,521 Zm00001d010406 GRMZM2G021069 mcm6 minichromosome maintenance6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 113,202,370 113,208,725 Zm00001d049190 GRMZM2G139894 mcm7 minichromosome maintenance7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 19,769,479 19,776,143 Zm00001d003945 GRMZM2G155281 mde1 mouse DNA EBV homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T14784 Chr2 71,037,398 71,040,700 Zm00001d039089 GRMZM2G154595 mdh2 malate dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 169,782,693 169,787,367 Zm00001d044042 GRMZM2G466833 mdh3 malate dehydrogenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU963335 Chr3 217,573,164 217,581,039 Zm00001d032695 GRMZM2G415359 mdh4 malate dehydrogenase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 234,902,658 234,908,089 Zm00001d014030 mdh5 malate dehydrogenase5 Chr5 29,404,683 29,410,087 Zm00001d031899 GRMZM2G129513 mdh6 malate dehydrogenase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (Oct 2013) Chr1 205,992,135 205,996,030 Zm00001d037962 GRMZM2G122479 me2 NADP-dependent malic enzyme2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 alignment to cDNA U399958 Chr6 143,657,539 143,663,237 Zm00001d000316 GRMZM2G085019 me3 NADP malic enzyme3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene B73V4_ctg89 18,903 24,123 Zm00001d012764 GRMZM2G118770 me4 malic enzyme4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ224847 Chr8 180,332,662 180,336,615 Zm00001d037693 GRMZM5G886257 me5 malic enzyme5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez gene 100284598 Chr6 134,212,972 134,216,929 Zm00001d043601 GRMZM2G159724 me6 NADP-dependent malic enzyme6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT055901 Chr3 204,885,503 204,890,587 Zm00001d051458 GRMZM5G835542 mecs1 methyl erythritol cyclodiphosphate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr4 159,348,371 159,355,666 Zm00001d017608 AC209374.4_FG002 mecs2 methyl erythritol cyclodiphosphate synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr5 201,460,778 201,462,840 GRMZM2G354335 meg1 maternally expressed gene1 Classical Gene Chr7 13,073,446 13,074,744 GRMZM2G086827 meg10 maternally expressed gene10 Xiong et al., 2014 Chr7 12,673,702 12,674,015 GRMZM2G181051 meg11 maternally expressed gene11 Xiong et al., 2014 Chr7 12,626,477 12,627,199 GRMZM2G175896 meg12 maternally expressed gene12 Xiong et al., 2014 Chr7 12,531,786 12,532,621 Zm00001d019019 GRMZM2G175912 meg13 maternally expressed gene13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiong et al., 2014 Chr7 12,903,625 12,904,375 Zm00001d019033 GRMZM2G145466 meg14 maternally expressed gene14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiong et al., 2014 Chr7 13,643,510 13,644,343 Zm00001d019024 GRMZM2G137959 meg15 maternally expressed gene15 low confidence Xiong et al., 2014 Chr7 13,007,830 13,008,728 GRMZM2G088896 meg2 maternally expressed gene2 Chr7 12,676,389 12,677,577 Zm00001d019027 GRMZM2G344323 meg3 maternally expressed gene3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100101508 Chr7 13,225,864 13,228,929 GRMZM5G896560 meg4 maternally expressed gene4 Chr7 39,888,296 39,889,211 Zm00001d019030 GRMZM2G094054 meg6 maternally expressed gene6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiong et al., 2014 Chr7 13,540,226 13,541,566 Zm00001d019029 GRMZM2G116212 meg7 maternally expressed gene7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiong et al., 2014 Chr7 13,463,976 13,469,499 GRMZM2G123153 meg8 maternally expressed gene8 Xiong et al., 2014 Chr7 12,859,255 12,859,461 GRMZM2G502035 meg9 maternally expressed gene9 Xiong et al., 2014 Chr7 12,752,035 12,752,664 Zm00001d043609 GRMZM2G167856 mek1 MEK homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence U83625 Chr3 205,101,695 205,107,235 Zm00001d018977 GRMZM2G333916 met1 DNA methyl transferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Li et al., 2014; ; aligns best with reference sequence AF229183 Chr7 11,464,692 11,479,268 Zm00001d026291 GRMZM2G025592 met2 DNA methyl transferase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models From sequence homology to Genbank accession NM_001111508.1 Chr10 142,982,967 142,990,366 Zm00001d048516 GRMZM2G092497 met3 DNA methyl transferase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models was gene model GRMZM2G092545 on RefGen_v1 corresponds to the gene model GRMZM2G092497 on RefGen_v2 Chr9 157,632,076 157,656,040 Zm00001d011329 GRMZM2G157589 met4 DNA methyl transferase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene Chr8 146,863,198 146,868,117 Zm00001d002330 GRMZM2G005310 met5 DNA methyl transferase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY027539 Chr2 10,460,528 10,470,318 Zm00001d010928 GRMZM2G065599 met6 DNA methyl transferase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2014 Chr8 133,839,411 133,861,487 Zm00001d027329 GRMZM2G137366 met7 DNA methyl transferase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,031,993 3,036,913 Zm00001d018976 GRMZM2G334041 met8 DNA methyl transferase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY093415, AF063403 & Li et al., 2014 Chr7 11,454,051 11,464,836 Zm00001d036296 GRMZM2G157820 mez1 enhancer of zeste1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 82,463,657 82,474,161 Zm00001d047636 GRMZM5G875502 mez2 enhancer of zeste2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 137,787,062 137,801,220 Zm00001d028890 GRMZM2G043484 mez3 enhancer of zeste3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene 541955 Chr1 49,809,777 49,823,368 Zm00001d040260 EF517601.1_FG016 mfs18 male flower specific18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 34,385,034 34,385,420 Zm00001d040468 GRMZM2G161310 mfsd1 major facilitator superfamily defense1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 45,120,037 45,134,869 Zm00001d052434 GRMZM5G877788 mfsd2 major facilitator superfamily defense2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY104766 Chr4 189,873,712 189,877,696 Zm00001d025287 GRMZM2G317406 mgs1 male-gametophyte specific1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 112,727,580 112,728,092 Zm00001d053597 GRMZM2G080056 mgs2 male gametophyte-specific2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene 542245 Chr4 235,911,860 235,913,945 Zm00001d000216 GRMZM2G323418 mgs3 male gametophyte specific3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT055324 B73V4_ctg129 204,285 205,601 Zm00001d000430 GRMZM2G108477 mgt1 magnesium transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 B73V4_ctg68 40,310 44,234 Zm00001d027582 GRMZM2G018706 mgt10 magnesium transporter10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr1 8,373,817 8,376,354 Zm00001d025416 GRMZM2G054632 mgt11 magnesium transporter11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr10 117,962,173 117,964,181 Zm00001d033527 GRMZM2G420436 mgt12 magnesium transporter12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr1 265,735,700 265,743,684 Zm00001d036714 GRMZM2G170326 mgt2 magnesium transporter2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr6 98,440,958 98,447,412 Zm00001d003125 GRMZM2G064467 mgt3 magnesium transporter3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr2 33,105,163 33,110,061 Zm00001d047388 GRMZM2G145794 mgt4 magnesium transporter4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr9 128,467,682 128,470,763 Zm00001d033969 GRMZM2G159295 mgt5 magnesium transporter5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr1 279,877,087 279,883,538 Zm00001d029808 GRMZM2G453832 mgt6 magnesium transporter6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr1 87,835,101 87,838,643 Zm00001d003666 GRMZM2G458879 mgt7 magnesium transporter7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr2 53,218,426 53,220,162 Zm00001d012102 GRMZM2G065971 mgt8 magnesium transporter8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr8 168,283,208 168,289,577 Zm00001d042441 GRMZM2G139822 mgt9 magnesium transporter9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr3 167,523,894 167,537,970 Zm00001d007775 GRMZM2G144821 mha1 membrane H(+)-ATPase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U09989 Chr2 239,388,885 239,393,934 Zm00001d002006 GRMZM2G019404 mha2 plasma-membrane H+ATPase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 4,277,523 4,284,581 Zm00001d019062 GRMZM2G104325 mha3 membrane H(+)-ATPase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models originally associated with mha1, but that is on chr 2 Chr7 14,880,511 14,886,995 Zm00001d026490 GRMZM2G006894 mha4 proton-exporting ATPase4 Chr10 146,954,113 146,960,946 Zm00001d036542 GRMZM2G150276 mir1 maize insect resistance1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 91,512,193 91,513,831 zma-MIR159d MIR159d microRNA MIR159d Chr8 0 0 Zm00001d036541 GRMZM2G150256 mir2 maize insect resistance2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT040644 Chr6 91,506,006 91,510,877 Zm00001d002065 GRMZM2G166281 mir3 maize insect resistance3 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment to sequence AF019147.1 GI:2425065 Chr2 5,233,170 5,237,006 zma-MIR390a miR390a microRNA MIR390a Chr1 0 0 zma-MIR390b miR390b microRNA MIR390b Chr5 0 0 zma-MIR399b miR399b microRNA MIR399b B73 v4 Chr4 0 0 Zm00001d038841 GRMZM2G090087 mis1 putative aldehyde dehydrogenase MIS1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 165,629,567 165,639,979 Zm00001d026640 GRMZM2G173660 mis12a minichromosome instability12a Gene model association inferred from similarity with B73 RefGen_v3 gene models from: FJ971487 Chr10 149,269,862 149,271,718 Zm00001d001798 GRMZM2G049495 mis12b minichromosome instability12b Gene model association inferred from similarity with B73 RefGen_v3 gene models from: FJ971488; GRMZM2G127481 on RefGen_v1 corresponds to the gene model GRMZM2G049495 on RefGen_v2 Chr2 1,081,627 1,084,219 Zm00001d026487 GRMZM2G104199 mkaku41 Maize KAKU4-Like1 Chr10 146,895,594 146,903,010 Zm00001d002012 GRMZM2G521862 mkaku42 Maize KAKU4-Like2 Chr2 4,325,836 4,336,209 Zm00001d013423 GRMZM2G163217 mkk10 mitogen-activated protein kinase kinase10 Chang et al., 2017 Chr5 11,051,638 11,052,750 Zm00001d045359 GRMZM2G400470 mkk2 mitogen-activated protein kinase kinase2 Chr9 19,532,789 19,536,828 GRMZM5G867568 mkk3 MAP kinase kinase3 from JN972438.1 on B73_V2 Chr3 111,094,841 111,094,990 Zm00001d018326 GRMZM5G878379 mkk4 MAP kinase kinase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: GU942956 Chr5 218,492,798 218,493,868 Zm00001d047875 GRMZM2G180555 mkkk10 MAP kinase kinase kinase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Kong et al 2013 Chr9 144,021,986 144,032,236 Zm00001d028514 GRMZM2G066120 mkkk11 MAP kinase kinase kinase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Kong et al 2013 Chr1 37,841,039 37,846,575 Zm00001d005696 GRMZM2G098828 mkkk16 MAP kinase kinase kinase16 from Kong et al 2013 Chr2 183,690,135 183,698,634 Zm00001d011655 GRMZM2G305066 mkkk18 MAP kinase kinase kinase18 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Kong et al 2013 Chr8 157,649,540 157,650,979 Zm00001d006644 GRMZM2G089159 mkkk27 MAP kinase kinase kinase27 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Kong et al 2013 Chr2 213,304,600 213,307,872 Zm00001d043459 GRMZM2G045366 mkkk47 MAP kinase kinase kinase47 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Kong et al 2013 Chr3 200,575,782 200,580,113 Zm00001d031014 GRMZM2G019434 mkkk51 MAP kinase kinase kinase51 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Kong et al 2013 Chr1 173,441,034 173,445,839 Zm00001d044091 GRMZM2G088299 mkkk55 MAP kinase kinase kinase55 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Kong et al 2013 Chr3 218,831,924 218,837,312 Zm00001d041918 GRMZM2G152889 mkkk63 MAP kinase kinase kinase63 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Kong et al 2013 Chr3 143,615,485 143,625,037 Zm00001d038870 GRMZM2G096475 mlg3 lea protein group3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 166,160,261 166,161,550 Zm00001d002723 GRMZM2G370707 mlkg1 Maize LINC KASH Grass-specific1 Chr2 20,507,073 20,507,849 Zm00001d038539 GRMZM2G117392 mlkg2 Maize LINC KASH Grass-specific2 Chr6 159,595,837 159,598,231 Zm00001d003334 GRMZM2G151418 mlkp1 Maize LINC KASH AtWIP-like1 Chr2 40,564,802 40,567,943 Zm00001d025667 GRMZM2G034882 mlkp2 Maize LINC KASH AtWIP-like2 Chr10 125,488,390 125,491,008 Zm00001d005997 GRMZM2G003992 mlkp3 Maize LINC KASH AtWIP-like3 Chr2 194,951,202 194,954,366 Zm00001d020879 GRMZM2G176407 mlkp4 Maize LINC KASH AtWIP-like4 Chr7 135,265,751 135,268,897 Zm00001d031134 GRMZM2G094850 mlks1 Maize LINC KASH AtSINE-like1 Chr1 178,998,581 179,001,994 Zm00001d052955 GRMZM2G000608 mlks2 Maize LINC KASH AtSINE-like2 Chr4 206,259,152 206,261,935 Zm00001d039272 GRMZM2G148723 mlkt1 Maize LINC KASH AtWIT-like1 bhlh46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 897,637 901,853 Zm00001d010047 GRMZM2G006661 mlkt2 Maize LINC KASH AtWIT-like2 Chr8 96,814,230 96,821,045 Zm00001d027486 GRMZM2G032219 mlo1 barley mlo defense gene homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542672 Chr1 6,310,322 6,313,633 Zm00001d029768 GRMZM2G040441 mlo2 barley mlo defense gene homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542061 Chr1 86,261,116 86,266,872 Zm00001d003569 GRMZM2G031331 mlo3 barley mlo defense gene homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542508 Chr2 48,390,876 48,396,098 Zm00001d053065 GRMZM2G089259 mlo4 barley mlo defense gene homolog4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 211,838,548 211,843,655 Zm00001d042578 GRMZM2G471142 mlo5 barley mlo defense gene homolog5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT039054 Chr3 172,481,064 172,485,130 Zm00001d014874 GRMZM2G325653 mlo6 barley mlo defense gene homolog6 Chr5 66,662,043 66,664,946 Zm00001d046781 GRMZM2G416887 mlo7 barley mlo defense gene homolog7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542673 Chr9 105,685,188 105,703,639 Zm00001d038205 GRMZM5G881803 mlo8 barley mlo defense gene homolog8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542065 Chr6 151,484,233 151,503,688 Zm00001d001804 GRMZM2G051974 mlo9 barley mlo defense gene homolog9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT040335 Chr2 1,251,628 1,257,162 Zm00001d041956 GRMZM5G832175 mmc0022 Chr3 145,600,518 145,603,370 Zm00001d016798 GRMZM2G114241 mmc0081 Chr5 176,187,350 176,189,107 Zm00001d040239 GRMZM2G134178 mmc0132 Chr3 33,381,788 33,383,589 Zm00001d019173 AC235546.1_FG001 mmc0162 Chr7 20,343,147 20,347,941 Zm00001d040312 GRMZM2G018951 mmc0312a Chr3 37,521,244 37,527,593 Zm00001d007187 GRMZM2G003409 mmc0381 Chr2 224,120,990 224,123,245 Zm00001d004933 GRMZM2G145651 mmc0401 Chr2 149,548,555 149,551,030 Zm00001d020769 GRMZM2G000404 mmc0411 Chr7 131,678,626 131,700,543 Zm00001d035649 GRMZM2G106042 mmp10 Chr6 38,354,047 38,355,769 Zm00001d036346 GRMZM2G000376 mmp108b Chr6 85,065,660 85,075,694 Zm00001d048081 GRMZM2G143450 mmp110 Chr9 149,598,933 149,607,634 Zm00001d013724 GRMZM2G061292 mmp112 Chr5 18,617,764 18,618,771 Zm00001d006566 GRMZM2G163297 mmp116 Chr2 211,038,725 211,040,522 Zm00001d018226 GRMZM5G897224 mmp118 Chr5 217,007,561 217,018,872 Zm00001d008903 GRMZM5G861077 mmp120 Chr8 24,556,830 24,558,656 Zm00001d020746 GRMZM2G446946 mmp127 Chr7 131,045,210 131,045,485 Zm00001d028114 GRMZM2G015219 mmp135 Chr1 23,265,205 23,270,017 Zm00001d007032 GRMZM2G035356 mmp137 Chr2 220,442,953 220,446,764 Zm00001d050790 GRMZM2G009019 mmp140 Chr4 123,187,727 123,191,108 Zm00001d047856 GRMZM2G141596 mmp142 Chr9 143,533,332 143,538,930 Zm00001d012590 GRMZM2G106250 mmp146 Chr8 176,950,180 176,952,032 Zm00001d008271 GRMZM2G175071 mmp148 Chr8 3,624,572 3,629,269 Zm00001d033414 GRMZM2G154890 mmp149b Chr1 262,412,278 262,419,216 Zm00001d038432 GRMZM2G095588 mmp150 Chr6 157,148,623 157,154,057 Zm00001d025067 GRMZM2G412207 mmp16 Chr10 102,424,604 102,432,854 Zm00001d036057 GRMZM2G178616 mmp160 Chr6 69,406,424 69,409,545 Zm00001d035333 GRMZM2G154743 mmp163 Chr6 21,731,801 21,733,345 Zm00001d034076 GRMZM2G074317 mmp165 Chr1 283,401,534 283,408,034 Zm00001d008633 GRMZM2G421669 mmp166 Chr8 15,281,961 15,285,618 Zm00001d003369 GRMZM2G050435 mmp167 Chr2 41,782,004 41,787,090 Zm00001d048053 GRMZM2G046729 mmp168 Chr9 148,924,294 148,927,769 Zm00001d033985 GRMZM2G010034 mmp172 Chr1 280,282,917 280,285,382 Zm00001d032408 GRMZM2G075247 mmp173 Chr1 225,781,323 225,785,475 Zm00001d048694 GRMZM2G062160 mmp174 Chr4 3,416,245 3,417,544 Zm00001d051496 GRMZM2G080959 mmp176 Chr4 160,437,529 160,438,553 Zm00001d006011 GRMZM2G080439 mmp177b Chr2 195,231,015 195,246,454 Zm00001d020911 GRMZM2G181378 mmp177c Chr7 136,267,590 136,271,907 Zm00001d052856 GRMZM2G317270 mmp178 Chr4 202,676,879 202,680,949 Zm00001d047516 GRMZM2G012970 mmp179 Chr9 133,203,896 133,206,261 Zm00001d018961 GRMZM2G066290 mmp18 Chr7 10,795,045 10,799,314 Zm00001d013896 GRMZM2G018695 mmp180 Chr5 24,174,969 24,176,411 Zm00001d019670 GRMZM2G026218 mmp187 Chr7 49,531,543 49,544,334 Zm00001d016443 GRMZM2G160327 mmp19 Chr5 162,551,303 162,553,340 Zm00001d048621 GRMZM2G308860 mmp192 Chr4 1,519,872 1,524,402 Zm00001d034405 GRMZM2G120657 mmp195d Chr1 292,041,509 292,045,751 Zm00001d034405 GRMZM2G120657 mmp195g Chr1 292,041,509 292,045,751 Zm00001d036158 GRMZM2G364349 mmp20 Chr6 74,947,112 74,948,473 Zm00001d020629 GRMZM2G172320 mmp21 Chr7 125,593,248 125,599,292 Zm00001d032962 GRMZM2G012611 mmp22 Chr1 244,881,980 244,894,327 Zm00001d052238 AC185478.4_FG005 mmp3 Chr4 184,344,859 184,345,623 Zm00001d002731 GRMZM2G170520 mmp33 Chr2 20,630,941 20,631,864 Zm00001d007105 GRMZM2G131554 mmp34 Chr2 222,362,512 222,364,930 Zm00001d047316 GRMZM2G163774 mmp37 Chr9 126,363,444 126,365,073 Zm00001d039378 GRMZM2G085550 mmp38 Chr3 2,791,183 2,793,926 Zm00001d029970 GRMZM2G076468 mmp39 Chr1 97,044,621 97,046,748 Zm00001d036306 GRMZM2G017636 mmp4 Chr6 83,685,783 83,686,856 Zm00001d047562 GRMZM2G022398 mmp41 Chr9 135,605,511 135,608,671 Zm00001d013049 GRMZM2G090573 mmp43 Chr5 3,819,243 3,825,110 Zm00001d020923 GRMZM2G084014 mmp46 Chr7 136,683,805 136,689,077 Zm00001d016900 GRMZM2G105429 mmp47 Chr5 179,634,790 179,635,893 Zm00001d043039 GRMZM2G702036 mmp5 Chr3 187,190,913 187,193,341 Zm00001d038857 GRMZM2G074790 mmp50 Chr6 165,907,842 165,913,299 GRMZM2G075262 mmp56 Chr1 55,502,658 55,506,277 Zm00001d015153 GRMZM2G444743 mmp58 Chr5 77,126,570 77,127,082 Zm00001d029888 GRMZM2G123585 mmp61 Chr1 92,327,821 92,333,275 Zm00001d038030 GRMZM5G822317 mmp62 Chr6 145,631,230 145,632,801 Zm00001d024515 mmp63 Chr10 75,531,512 75,533,071 Zm00001d012485 GRMZM2G036448 mmp64 Chr8 175,357,855 175,362,943 Zm00001d028512 GRMZM2G073591 mmp66 Chr1 37,678,345 37,682,334 Zm00001d022306 GRMZM2G014295 mmp67 Chr7 174,841,429 174,845,474 Zm00001d027815 GRMZM2G424020 mmp68 Chr1 14,329,827 14,333,803 Zm00001d026127 GRMZM2G084491 mmp71 Chr10 139,138,426 139,205,090 Zm00001d045309 GRMZM2G105909 mmp77 Chr9 18,678,409 18,682,507 Zm00001d041584 GRMZM2G454039 mmp80 Chr3 128,389,890 128,392,834 Zm00001d018954 GRMZM2G161097 mmp81 Chr7 10,457,752 10,458,921 Zm00001d006673 GRMZM2G121458 mmp84 Chr2 214,011,828 214,022,318 Zm00001d050714 GRMZM2G056442 mmp86 Chr4 117,910,694 117,919,249 Zm00001d041327 GRMZM2G061527 mmp9 Chr3 112,397,485 112,399,899 Zm00001d017125 GRMZM2G308203 mmp90 Chr5 186,171,790 186,176,962 Zm00001d027659 GRMZM2G087918 mmp93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 10,349,113 10,358,254 Zm00001d053612 GRMZM2G003411 mmp94 Chr4 236,474,079 236,481,803 Zm00001d011099 GRMZM2G098039 mmt1 methionine S-methyltransferase1 Chr8 139,011,948 139,022,404 Zm00001d003776 GRMZM2G119689 mn1 miniature seed1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 58,876,332 58,879,327 Zm00001d010918 GRMZM2G042593 mneap1 Maize Nuclear Envelope-Associated Protein1 Chr8 133,384,901 133,388,865 Zm00001d024756 GRMZM2G061728 mneap2 Maize Nuclear Envelope-Associated Protein2 Chr10 86,469,146 86,473,935 Zm00001d002875 mneap3 Maize Nuclear Envelope-Associated Protein3 Chr2 25,265,030 25,268,673 Zm00001d003378 GRMZM2G042443 mop1 mediator of paramutation1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 42,148,337 42,154,340 Zm00001d047758 GRMZM2G053987 mpk1 MAP kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AB016801 Chr9 141,026,557 141,029,745 Zm00001d015269 GRMZM2G062914 mpk14 MAP kinase14 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of DQ295030 and AY105935 to B73_v2 Chr5 82,143,688 82,149,070 Zm00001d045310 GRMZM2G020216 mpk2 MAP kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AB016802 Chr9 18,782,254 18,788,548 Zm00001d028711 GRMZM2G017792 mpk3 MAP kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to EU130900 Chr1 43,908,553 43,911,257 Zm00001d024807 GRMZM2G089484 mpk6 MAP kinase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT060960 Chr10 88,836,429 88,842,405 Zm00001d036215 GRMZM2G002100 mpk7 MAP kinase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT040404 Chr6 77,510,982 77,515,737 Zm00001d018183 GRMZM2G152827 mpt1 mitochondrial phosphate transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,965,775 215,970,551 Zm00001d002154 GRMZM2G106056 mre11a meiotic recombination protein 11 homolog A Gene model association inferred from similarity with B73 RefGen_v3 gene models from: ABQ59303 (Sidhu et al., 2017) Chr2 6,869,196 6,875,212 Zm00001d049471 GRMZM2G309109 mre11b meiotic recombination protein 11 homolog B Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (Oct 2013) Chr4 31,448,746 31,454,292 Zm00001d010889 GRMZM2G111306 mrp1 Myb related protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 132,313,361 132,314,587 Zm00001d046226 GRMZM2G113203 mrpa1 multidrug resistance protein associated1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100037760 Chr9 73,244,262 73,250,675 Zm00001d020666 GRMZM5G832772 mrpa2 multidrug resistance associated protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 127,315,049 127,322,067 Zm00001d045269 GRMZM2G111903 mrpa3 multidrug resistance-associated protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 17,510,977 17,523,858 Zm00001d027625 GRMZM5G820122 mrpa4 multidrug resistance-associated protein 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: CS229842 Chr1 9,346,098 9,353,496 Zm00001d002275 GRMZM2G084181 mrpa5 multidrug resistance-associated protein5 Chr2 9,302,717 9,316,367 Zm00001d009243 GRMZM2G142870 mrpa6 multidrug resistance associated protein6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU950350 Chr8 46,518,330 46,532,634 Zm00001d039653 GRMZM5G830695 mrpa7 multidrug resistance associated protein7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 10,752,207 10,756,034 Zm00001d012605 GRMZM2G139160 mrpi1 MRP interacting1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: FM252125 Chr8 177,084,651 177,090,378 Zm00001d043243 GRMZM2G105224 mrpi2 MRP interacting2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 192,962,985 192,965,166 Zm00001d024712 GRMZM5G830329 ms10 male sterile10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Somaratne et al.,2016 Chr10 84,554,486 84,559,654 Zm00001d018802 GRMZM2G442791 ms22 male sterile22 Gene model association inferred from similarity with B73 RefGen_v3 gene models from homology to GN051196 Chr7 5,664,064 5,664,543 Zm00001d008174 GRMZM2G021276 ms23 male sterile23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nan et al., 2016; assigned by the Grassius project, (Yilmaz et al 2009) Chr8 256,295 258,840 Zm00001d027837 GRMZM2G091822 ms26 male sterile26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 14,702,216 14,704,540 Zm00001d006564 GRMZM2G163233 ms32 male sterile32 Gene model association inferred from similarity to bHLH per Moon et al 2013 Moon et al., 2013; bhlh66 locus assigned by the Grassius project, (Yilmaz et al 2009); same as assigned to ms32 (Moon et al, 2013) Chr2 211,024,993 211,027,729 Zm00001d007714 GRMZM2G070304 ms33 male sterile33 Chr2 238,013,082 238,015,359 Zm00001d043909 GRMZM5G804976 ms39 male sterile39 candidate candidate Chr3 213,579,332 213,586,250 Zm00001d052736 AC225127.3_FG003 ms44 male sterile44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Fox et al., 2017 Chr4 199,343,999 199,344,667 Zm00001d047859 GRMZM2G307906 ms45 male sterile45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 143,633,531 143,636,108 Zm00001d048337 GRMZM2G120987 ms6021 male sterile6021 Tian et al., 2017 Chr9 154,667,073 154,670,341 Zm00001d020680 GRMZM5G890224 ms7 male sterile7 v4 Zhang et al., 2017 Chr7 127,860,533 127,863,145 Zm00001d012234 GRMZM2G119265 ms8 male sterile8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al., 2013 Chr8 170,600,288 170,602,763 Zm00001d028777 GRMZM2G308034 ms9 male sterile9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: sequence in Albertsen et al., 2016 Chr1 46,189,691 46,192,097 Zm00001d048655 GRMZM2G057450 msf1 mRNA splicing factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 2,668,192 2,674,113 Zm00001d049950 GRMZM2G036217 msh1 male sterile protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 55,129,672 55,133,478 Zm00001d042362 GRMZM2G447447 msp1 multiple sporocyte1 Chr3 163,209,486 163,216,912 Zm00001d015853 GRMZM2G306771 msp2 multiple sporocyte2 Chr5 126,421,597 126,426,765 Zm00001d012048 GRMZM2G107484 msp3 multiple sporocyte3 Chr8 167,205,232 167,221,108 Zm00001d010336 GRMZM2G089308 msrb2 methionine sulfoxide reductase b2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Olukolu, BA et al. 2016 Chr8 110,250,082 110,255,517 Zm00001d018309 GRMZM2G110185 mss1 MSS1 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT042297 Chr5 218,238,432 218,242,413 Zm00001d018627 GRMZM2G135739 mstr1 monosaccharide transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY683004 Chr7 1,335,710 1,339,124 Zm00001d049467 GRMZM2G141034 mstr2 monosaccharide transporter2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY683005 Chr4 31,378,981 31,380,525 Zm00001d000183 GRMZM2G034061 mstr4 monosaccharide transporter4 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg181 307,491 312,293 Zm00001d034059 GRMZM2G090422 mta1 ribosomal protein L13A homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 282,747,831 282,749,777 Zm00001d029242 GRMZM2G168665 mterf1 mTERF-domain protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 63,479,560 63,480,471 Zm00001d041537 GRMZM2G177019 mterf10 mTERF domain protein10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 126,166,316 126,167,305 Zm00001d042436 GRMZM2G023257 mterf11 mTERF domain protein11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 167,171,083 167,172,249 Zm00001d049743 GRMZM2G113181 mterf12 mTERF protein domain12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 42,447,381 42,459,199 Zm00001d050886 GRMZM2G312806 mterf13 mTERF-domain protein13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 128,466,573 128,467,412 Zm00001d052081 GRMZM2G000610 mterf14 mTERF protein domain21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 178,936,233 178,939,151 Zm00001d015585 GRMZM2G119921 mterf15 mTERF domain protein27c Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 99,710,472 99,711,659 Zm00001d009338 GRMZM2G395850 mterf16 mTERF domain protein16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 56,937,009 56,937,860 Zm00001d017130 GRMZM2G024550 mterf17 mTERF domain protein17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 186,476,548 186,479,329 Zm00001d018065 GRMZM2G017355 mterf18 mTERF domain protein7b Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 213,694,436 213,695,611 Zm00001d018066 GRMZM2G017429 mterf19 mTERF-domain protein19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 213,696,372 213,697,544 Zm00001d031533 GRMZM2G061542 mterf2 mTERF protein domain2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 193,316,763 193,318,712 GRMZM2G158854 mterf20 mTERF domain protein28e assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,026,456 208,027,062 Zm00001d018124 GRMZM2G161146 mterf21 mTERF domain protein21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,730,366 214,731,481 Zm00001d038158 GRMZM2G012999 mterf22 mTERF-domain protein22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,857,328 149,858,539 Zm00001d018756 GRMZM2G426154 mterf23 mTERF-domain protein23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,290,052 4,307,739 Zm00001d018756 GRMZM2G175930 mterf24 mTERF-domain protein24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,290,052 4,307,739 Zm00001d021376 GRMZM2G142150 mterf25 mTERF-domain protein16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 150,246,031 150,250,848 Zm00001d021513 GRMZM2G062910 mterf26 mTERF-domain protein26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 154,682,758 154,684,482 Zm00001d010329 GRMZM2G325350 mterf27 mTERF-domain protein27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 109,953,875 109,955,137 GRMZM2G068462 mterf29 mTERF-domain protein29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,784,489 149,785,027 Zm00001d033138 GRMZM2G034217 mterf3 mTERF domain protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 251,842,429 251,846,045 Zm00001d047442 GRMZM2G157716 mterf30 mTERF-domain protein30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 130,336,965 130,337,861 GRMZM2G054517 mterf32 mTERF domain protein32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,596,590 293,597,275 Zm00001d050234 GRMZM2G044832 mterf33 mTERF domain protein33 Gene model association inferred from similarity with B73 RefGen_v3 gene models from protein sequence NP_001152154.1 Chr4 75,106,267 75,107,484 Zm00001d010340 GRMZM2G029933 mterf4 mTERF-domain protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 110,435,824 110,437,308 Zm00001d034669 GRMZM2G159766 mterf5 mTERF-domain protein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 299,321,980 299,323,654 Zm00001d034784 GRMZM2G170137 mterf6 mTERF-domain protein6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 302,249,936 302,255,526 GRMZM2G087679 mterf7 mTERF-domain protein7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 200,677,205 200,677,752 Zm00001d006629 GRMZM2G060114 mterf8 mTERF-domain protein8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 212,952,452 212,953,621 Zm00001d006700 GRMZM2G130773 mterf9 mTERF-domain protein9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 214,673,600 214,677,670 Zm00001d013644 GRMZM2G112149 mthr1 methionine synthase homolog1 Chr5 16,104,795 16,110,218 Zm00001d048611 GRMZM2G164229 mtl1 metallothionein1 from: X82186 - low confidence overlaps with AC188003.3_FG012, GRMZM2G164225, AC188003.3_FG011, GRMZM2G415161, and GRMZM2G308369 Chr4 1,283,712 1,284,484 Zm00001d029778 GRMZM2G402564 mtl2 metallothionein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Z34469 Chr1 86,529,694 86,530,424 Zm00001d039859 GRMZM2G099340 mtl3 metallothionein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 16,955,374 16,956,401 Zm00001d047128 GRMZM2G009070 murE1 mureinE1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AFW87925 Chr9 119,414,807 119,418,522 Zm00001d022028 GRMZM2G056075 mus1 MutS homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 168,269,022 168,278,683 Zm00001d039596 GRMZM2G110212 mus2 MutS homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ238787 Chr3 8,649,713 8,661,900 Zm00001d020424 GRMZM2G421541 mus3 mismatch binding protein Mus3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 113,218,224 113,228,485 Zm00001d020384 GRMZM2G082264 mwp1 milkweed pod1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 110,525,083 110,531,709 Zm00001d035918 GRMZM2G102790 myb1 MYB-transcription factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AF474115 Chr6 60,271,741 60,272,826 Zm00001d011645 GRMZM2G395672 myb10 MYB-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 157,426,995 157,428,942 Zm00001d030644 GRMZM2G143046 myb100 MYB-transcription factor 100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 150,483,395 150,485,385 Zm00001d024725 GRMZM2G425427 myb101 MYB-transcription factor 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 85,285,499 85,286,719 Zm00001d013931 GRMZM2G392823 myb102 MYB-transcription factor 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 25,111,416 25,112,574 Zm00001d051269 GRMZM2G111045 myb103 MYB-transcription factor 103 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 151,309,707 151,312,076 Zm00001d002750 GRMZM2G105137 myb104 MYB-transcription factor 104 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,406,606 21,408,172 Zm00001d021761 GRMZM2G031323 myb105 MYB-transcription factor 105 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 162,527,404 162,529,059 Zm00001d037334 GRMZM2G048910 myb106 MYB-transcription factor 106 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 121,922,624 121,924,231 Zm00001d023287 GRMZM2G172575 myb107 MYB-transcription factor 107 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,216,330 2,217,229 Zm00001d050185 GRMZM2G011422 myb108 MYB-transcription factor 108 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 71,478,007 71,479,474 Zm00001d023931 GRMZM2G052606 myb109 MYB-transcription factor 109 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 29,359,954 29,360,247 Zm00001d022628 GRMZM2G000818 myb11 MYB-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 181,720,257 181,728,090 Zm00001d007191 GRMZM2G176327 myb110 MYB-transcription factor 110 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 224,248,136 224,249,179 Zm00001d005784 GRMZM2G115859 myb111 MYB-transcription factor 111 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 188,225,506 188,227,001 Zm00001d046632 GRMZM5G803308 myb112 MYB-transcription factor 112 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 99,815,018 99,815,932 Zm00001d005307 GRMZM2G090837 myb113 MYB-transcription factor 113 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 168,964,648 168,965,706 Zm00001d011739 GRMZM2G151205 myb114 MYB-transcription factor 114 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 160,432,796 160,433,990 Zm00001d000361 GRMZM2G423833 myb115 MYB-transcription factor 115 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg115 46,043 53,651 Zm00001d036577 GRMZM2G343068 myb116 MYB-transcription factor 116 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,494,411 93,496,100 Zm00001d039306 GRMZM2G470307 myb117 MYB-transcription factor 117 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,424,835 1,430,811 Zm00001d041580 GRMZM2G160840 myb118 MYB-transcription factor 118 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 128,152,758 128,154,332 Zm00001d037994 AC213884.3_FG002 myb119 MYB-transcription factor 119 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 144,651,004 144,652,113 Zm00001d013164 GRMZM2G104789 myb12 MYB-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,673,628 5,677,335 Zm00001d027623 GRMZM2G054111 myb120 MYB-transcription factor 120 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 9,256,393 9,258,054 Zm00001d032694 GRMZM2G147346 myb121 MYB-transcription factor 121 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 234,842,943 234,845,229 Zm00001d046517 GRMZM2G416652 myb122 MYB-transcription factor 122 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 93,396,849 93,405,759 Zm00001d023284 GRMZM2G172487 myb123 MYB-transcription factor 123 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,210,289 2,211,146 Zm00001d011669 GRMZM2G003406 myb124 MYB-transcription factor 124 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 158,166,587 158,167,961 Zm00001d032206 GRMZM2G079123 myb125 MYB-transcription factor 125 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 217,042,533 217,044,651 Zm00001d016952 GRMZM2G001223 myb126 MYB-transcription factor 126 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 181,022,647 181,024,609 Zm00001d041935 GRMZM2G369799 myb127 MYB-transcription factor 127 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 144,357,752 144,358,546 Zm00001d040527 GRMZM2G017520 myb128 MYB-transcription factor 128 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,286,239 48,288,111 Zm00001d013801 GRMZM2G070523 myb129 MYB-transcription factor 129 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 20,673,284 20,676,096 Zm00001d002476 GRMZM2G038722 myb13 MYB-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,590,866 13,592,608 Zm00001d038930 GRMZM2G069325 myb130 MYB-transcription factor 130 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 167,214,153 167,215,654 Zm00001d039496 GRMZM2G001875 myb131 MYB-transcription factor 131 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 5,913,103 5,914,797 Zm00001d025864 AC206901.3_FG005 myb132 MYB-transcription factor 132 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 131,914,989 131,917,182 Zm00001d001837 GRMZM2G149958 myb133 MYB-transcription factor 133 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 1,669,402 1,673,203 Zm00001d024726 GRMZM2G001824 myb134 MYB-transcription factor 134 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 85,360,224 85,361,291 Zm00001d040428 GRMZM2G460869 myb136 MYB-transcription factor 136 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 43,065,775 43,066,839 Zm00001d040019 GRMZM2G162709 myb137 MYB-transcription factor 137 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 23,109,131 23,110,862 Zm00001d043131 GRMZM2G139688 myb138 MYB-transcription factor 138 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 189,941,282 189,945,237 Zm00001d005300 GRMZM2G087955 myb139 MYB-transcription factor 139 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 168,527,945 168,528,802 Zm00001d021537 GRMZM2G172327 myb14 MYB-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 155,328,673 155,330,345 Zm00001d020569 GRMZM2G117244 myb140 MYB-transcription factor 140 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 122,618,970 122,620,761 Zm00001d006585 GRMZM2G166337 myb141 MYB-transcription factor 141 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,619,081 211,620,480 Zm00001d051788 GRMZM2G055158 myb142 MYB-transcription factor 142 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 169,863,214 169,864,538 Zm00001d051117 GRMZM2G043792 myb144 MYB-transcription factor 144 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 144,038,256 144,039,547 Zm00001d040594 GRMZM2G158700 myb145 MYB-transcription factor 145 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 52,179,189 52,180,100 Zm00001d032240 GRMZM2G106558 myb146 MYB-transcription factor 146 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 218,510,675 218,511,967 Zm00001d010933 GRMZM2G330475 myb147 MYB-transcription factor 147 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 134,043,470 134,044,573 Zm00001d045560 GRMZM2G044824 myb148 MYB-transcription factor 148 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 26,696,309 26,697,439 Zm00001d024784 GRMZM2G127490 myb149 MYB-transcription factor 149 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,973,477 87,976,336 Zm00001d042910 GRMZM2G081919 myb15 MYB-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 183,711,436 183,723,137 Zm00001d014364 GRMZM2G161512 myb150 MYB-transcription factor 150 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 42,931,796 42,934,191 Zm00001d043611 GRMZM2G167829 myb151 MYB-transcription factor 151 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 205,136,822 205,138,473 Zm00001d021296 GRMZM2G104551 myb152 MYB-transcription factor 152 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 148,154,982 148,165,194 Zm00001d019712 GRMZM2G050550 myb153 MYB-transcription factor 153 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 53,178,504 53,179,541 Zm00001d047671 GRMZM2G022686 myb154 MYB-transcription factor 154 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 138,752,709 138,756,941 Zm00001d024488 GRMZM2G150680 myb155 MYB-transcription factor 155 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 73,839,384 73,843,136 Zm00001d029293 GRMZM2G147698 myb156 MYB-transcription factor 156 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 65,078,005 65,079,230 Zm00001d016000 GRMZM2G073836 myb157 MYB-transcription factor 157 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 138,562,425 138,590,869 Zm00001d036768 GRMZM2G078820 myb158 MYB-transcription factor 158 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 100,159,664 100,160,590 Zm00001d020408 GRMZM2G126566 myb159 MYB-transcription factor 159 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 111,958,019 111,961,171 Zm00001d052069 GRMZM2G015021 myb16 MYB-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 178,364,585 178,366,789 Zm00001d013070 GRMZM2G302549 myb160 MYB-transcription factor 160 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,264,331 4,269,310 Zm00001d014989 GRMZM2G088189 myb161 MYB-transcription factor 161 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 71,262,940 71,264,436 Zm00001d020457 GRMZM2G045748 myb162 MYB-transcription factor 162 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 115,739,490 115,741,009 Zm00001d012255 GRMZM2G405094 myb163 MYB-transcription factor 163 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,085,931 171,087,013 Zm00001d031270 GRMZM2G110135 myb164 MYB-transcription factor 164 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 184,550,117 184,551,424 Zm00001d048383 GRMZM2G089686 myb165 MYB-transcription factor 165 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 155,286,842 155,288,530 Zm00001d051267 GRMZM2G496770 myb166 MYB-transcription factor 166 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 151,178,362 151,181,128 Zm00001d032032 GRMZM2G037650 myb167 MYB-transcription factor 167 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 209,992,350 209,997,511 Zm00001d053210 GRMZM2G138427 myb17 MYB-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 220,292,682 220,295,236 Zm00001d034211 GRMZM2G356718 myb18 MYB-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 286,858,191 286,860,122 Zm00001d051520 GRMZM5G833253 myb19 MYB-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models myb19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 161,213,576 161,215,329 Zm00001d042287 AC203535.4_FG001 myb2 myb transcription factor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 159,074,669 159,084,170 Zm00001d039700 GRMZM2G052377 myb20 MYB-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 12,503,835 12,504,977 Zm00001d035605 GRMZM2G305856 myb21 MYB-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 36,427,345 36,428,954 Zm00001d008528 GRMZM2G096358 myb22 MYB-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 11,883,571 11,885,380 Zm00001d022259 GRMZM2G150841 myb23 MYB-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,850,976 173,853,082 Zm00001d011614 GRMZM2G006352 myb24 MYB-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,950,883 155,952,700 Zm00001d010201 GRMZM2G431156 myb25 MYB-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 103,881,482 103,882,231 Zm00001d017383 GRMZM2G170049 myb26 MYB-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 193,951,312 193,955,766 Zm00001d044538 GRMZM2G064744 myb27 MYB-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 231,309,779 231,312,054 Zm00001d050400 GRMZM2G111117 myb28 MYB-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 85,967,006 85,968,538 Zm00001d047579 GRMZM2G134279 myb29 MYB-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 136,185,732 136,187,949 Zm00001d016653 GRMZM2G099334 myb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 171,349,333 171,350,583 Zm00001d010907 GRMZM2G171781 myb30 MYB-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 132,971,022 132,973,384 Zm00001d006236 GRMZM2G050305 myb31 MYB31 transcription factor31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 202,580,128 202,588,798 Zm00001d042665 GRMZM2G160838 myb32 MYB-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 175,964,663 175,965,738 Zm00001d032179 GRMZM2G131937 myb33 MYB-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 215,957,280 215,958,780 Zm00001d042830 GRMZM2G125522 myb34 MYB-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 181,377,889 181,379,729 Zm00001d005760 AC165178.2_FG004 myb35 MYB-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,872,023 186,873,836 Zm00001d012379 GRMZM2G169316 myb36 MYB-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,237,609 173,239,733 Zm00001d013399 GRMZM2G455869 myb37 MYB-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,404,922 10,407,154 Zm00001d032024 GRMZM2G084583 myb38 myb transcription factor38 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Grassius Chr1 209,721,047 209,722,443 Zm00001d051149 GRMZM2G127857 myb39 myb transcription factor39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 145,959,279 145,960,656 Zm00001d048647 GRMZM2G131442 myb4 MYB-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,600,276 2,602,518 Zm00001d040621 GRMZM2G051256 myb40 myb transcription factor40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 54,361,997 54,365,806 Zm00001d017268 GRMZM2G095904 myb41 MYB-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,151,367 191,152,674 GRMZM2G419239 myb42 myb transcription factor 42 Chr4 217,140,381 217,141,824 Zm00001d040426 GRMZM2G083239 myb43 MYB-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 42,867,274 42,868,539 Zm00001d040423 GRMZM2G111731 myb44 MYB-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 42,817,665 42,819,244 Zm00001d018776 GRMZM2G051793 myb45 MYB-transcription factor 45 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,961,661 4,980,931 Zm00001d043687 GRMZM2G088783 myb47 MYB-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 207,411,767 207,413,717 Zm00001d018097 GRMZM2G159547 myb48 MYB-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,127,646 214,129,053 Zm00001d003412 GRMZM2G032655 myb49 MYB-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 43,580,336 43,582,878 Zm00001d026203 GRMZM2G097636 myb5 MYB-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,869,750 140,871,173 Zm00001d015614 GRMZM2G145444 myb50 MYB-transcription factor 50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 101,152,012 101,152,926 Zm00001d041818 GRMZM5G803355 myb51 MYB-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 139,104,748 139,106,839 Zm00001d047182 GRMZM2G098179 myb52 MYB-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 121,102,734 121,104,079 Zm00001d044107 GRMZM2G143328 myb53 MYB-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,453,611 219,454,543 Zm00001d002843 GRMZM2G123202 myb54 MYB-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 24,293,846 24,295,521 Zm00001d030678 GRMZM2G130149 myb56 MYB-transcription factor 56 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 152,667,851 152,669,369 Zm00001d033075 AC217264.3_FG005 myb58 MYB-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 249,662,821 249,664,552 Zm00001d036551 GRMZM2G093789 myb59 MYB-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 91,831,037 91,834,032 Zm00001d041576 GRMZM2G047626 myb6 MYB-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 127,808,680 127,810,192 Zm00001d008251 GRMZM2G312419 myb60 MYB-transcription factor 60 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 2,928,345 2,930,423 Zm00001d053124 GRMZM2G108959 myb61 MYB-transcription factor 61 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 214,607,218 214,608,953 Zm00001d035604 GRMZM2G013581 myb62 MYB-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 36,325,267 36,326,373 Zm00001d052804 GRMZM2G017268 myb63 MYB-transcription factor 63 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 201,420,640 201,421,910 Zm00001d004744 GRMZM2G124715 myb64 MYB-transcription factor 64 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 135,504,533 135,506,004 Zm00001d026204 GRMZM2G097638 myb65 MYB-transcription factor 65 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,872,548 140,874,240 Zm00001d020405 GRMZM2G169356 myb66 MYB-transcription factor 66 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 111,820,330 111,821,428 Zm00001d053060 GRMZM2G089244 myb67 MYB-transcription factor 67 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 211,442,081 211,444,631 Zm00001d026186 GRMZM2G311059 myb68 MYB-transcription factor 68 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,542,121 140,544,170 Zm00001d023282 AC197146.3_FG002 myb69 MYB-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,048,298 2,049,531 Zm00001d006922 GRMZM2G064630 myb7 MYB-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 219,448,057 219,452,768 GRMZM2G139284 myb70 MYB-transcription factor 70 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,409,017 213,410,688 Zm00001d037999 GRMZM2G093647 myb71 MYB-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 144,762,649 144,763,524 Zm00001d003064 GRMZM2G048295 myb72 MYB-transcription factor 72 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 30,987,718 30,989,878 Zm00001d033265 GRMZM2G121570 myb73 MYB-transcription factor 73 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 256,498,470 256,500,905 Zm00001d012544 GRMZM2G028054 myb74 MYB-transcription factor 74 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 176,420,877 176,424,706 Zm00001d028930 GRMZM2G070849 myb75 MYB-transcription factor 75 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 51,839,504 51,841,800 Zm00001d008695 GRMZM2G143274 myb76 MYB-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 17,318,353 17,319,271 Zm00001d033815 GRMZM2G077147 myb77 MYB-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 274,393,280 274,395,337 Zm00001d032194 GRMZM2G428555 myb78 MYB-transcription factor 78 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 216,643,340 216,646,707 Zm00001d012337 GRMZM2G056986 myb79 MYB-transcription factor 79 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 172,699,749 172,700,888 Zm00001d041853 GRMZM2G041415 myb8 myb transcription factor8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 140,875,425 140,876,585 Zm00001d034467 GRMZM5G870592 myb80 MYB-transcription factor 80 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,829,659 293,833,423 Zm00001d039893 GRMZM2G020772 myb81 MYB-transcription factor 81 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 18,371,543 18,374,234 Zm00001d046518 GRMZM2G167088 myb82 MYB-transcription factor 82 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 93,438,079 93,444,871 Zm00001d032178 GRMZM2G024468 myb83 MYB-transcription factor 83 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 215,896,905 215,898,543 Zm00001d025664 GRMZM2G173633 myb84 MYB-transcription factor 84 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 125,369,798 125,371,471 Zm00001d038338 GRMZM2G077789 myb85 MYB-transcription factor 85 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,811,648 154,812,744 Zm00001d017243 GRMZM2G027697 myb86 MYB-transcription factor 86 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 190,147,000 190,148,416 Zm00001d046519 GRMZM2G004090 myb87 MYB-transcription factor 87 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 93,484,168 93,490,984 Zm00001d048623 GRMZM2G048136 myb88 MYB-transcription factor 88 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project to myb88, (Yilmaz et al 2009) Chr4 1,532,822 1,534,194 Zm00001d017385 GRMZM2G040924 myb89 MYB-transcription factor 89 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 194,002,524 194,004,526 Zm00001d026197 GRMZM2G081557 myb9 MYB transcription factor9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,757,698 140,759,098 Zm00001d009066 GRMZM2G047600 myb90 MYB-transcription factor 90 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 34,057,004 34,057,960 Zm00001d009435 GRMZM2G119693 myb91 MYB-transcription factor 91 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 64,426,230 64,427,152 Zm00001d024630 GRMZM2G325907 myb92 MYB-transcription factor 92 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 81,140,535 81,143,186 Zm00001d037998 GRMZM2G093660 myb93 MYB-transcription factor 93 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 144,731,260 144,732,225 Zm00001d009088 GRMZM2G051528 myb95 myb transcription factor95 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100037755; and assigned by the Grassius project, (Yilmaz et al 2009) Chr8 35,616,440 35,617,907 Zm00001d009184 GRMZM2G322490 myb96 MYB-transcription factor 96 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 41,744,670 41,745,263 Zm00001d031515 GRMZM2G046443 myb98 MYB-transcription factor 98 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,483,919 192,484,951 Zm00001d038878 GRMZM2G175232 myb99 MYB-transcription factor 99 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 166,302,446 166,304,056 Zm00001d049236 GRMZM2G477533 mybr10 MYB-related-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 22,178,186 22,179,293 Zm00001d017609 GRMZM5G833032 mybr100 MYB-related-transcription factor 100 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,463,285 201,477,308 Zm00001d028842 GRMZM2G129872 mybr102 MYB-related-transcription factor 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,424,617 48,430,126 Zm00001d031454 GRMZM2G022499 mybr103 MYB-related-transcription factor 103 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 190,649,919 190,653,721 Zm00001d034891 GRMZM2G023557 mybr104 MYB-related-transcription factor 104 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 304,942,283 304,943,362 Zm00001d003496 GRMZM2G471039 mybr105 MYB-related-transcription factor 105 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 46,050,675 46,052,185 Zm00001d013265 GRMZM2G129817 mybr106 MYB-related-transcription factor 106 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,397,790 7,408,662 Zm00001d008229 GRMZM2G456960 mybr107 MYB-related-transcription factor 107 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,983,066 1,984,497 GRMZM2G304840 mybr108 MYB-related-transcription factor 108 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,181,160 149,185,462 GRMZM2G433450 mybr109 MYB-related-transcription factor 109 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 62,424,724 62,426,967 Zm00001d017507 GRMZM2G071468 mybr11 MYB-related-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 197,864,412 197,884,322 Zm00001d044311 GRMZM2G443202 mybr110 MYB-related-transcription factor 110 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 224,969,472 224,970,756 Zm00001d026017 GRMZM2G181030 mybr111 MYB-related-transcription factor 111 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 136,073,204 136,075,724 Zm00001d010087 GRMZM2G370896 mybr112 MYB-related-transcription factor 112 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 98,849,846 98,862,302 Zm00001d025930 GRMZM2G001106 mybr113 MYB-related-transcription factor 113 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 133,977,640 133,978,998 Zm00001d004521 GRMZM2G119261 mybr114 MYB-related-transcription factor 114 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 116,470,474 116,480,753 Zm00001d011515 GRMZM2G049378 mybr115 MYB-related-transcription factor 115 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 153,108,098 153,110,782 Zm00001d006134 GRMZM5G847287 mybr116 MYB-related-transcription factor 116 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 199,512,791 199,513,658 Zm00001d028846 GRMZM2G112263 mybr12 MYB-related-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,441,014 48,442,749 Zm00001d038288 GRMZM2G091201 mybr13 MYB-related-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,438,837 153,439,986 Zm00001d041847 GRMZM2G340756 mybr14 MYB-related-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 140,452,942 140,459,568 Zm00001d032107 GRMZM2G048403 mybr15 MYB-related-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 213,151,287 213,157,154 GRMZM2G382029 mybr16 MYB-related-transcription factor 16 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 8,495,835 8,497,325 Zm00001d044409 GRMZM2G071977 mybr17 MYB-related-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 227,433,298 227,435,079 Zm00001d008601 GRMZM2G176568 mybr18 MYB-related-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 14,158,249 14,159,062 Zm00001d045162 GRMZM2G402156 mybr19 MYB-related-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 14,780,005 14,781,306 Zm00001d008198 GRMZM2G400489 mybr2 MYB-related-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 957,005 966,468 Zm00001d002545 GRMZM2G421256 mybr20 MYB-related-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,128,166 15,131,434 Zm00001d008602 GRMZM2G079458 mybr21 MYB-related-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 14,167,587 14,170,217 Zm00001d039475 GRMZM2G468479 mybr22 MYB-related-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 5,284,136 5,296,963 Zm00001d036883 GRMZM2G075064 mybr23 MYB-related-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 105,560,166 105,566,394 Zm00001d008808 GRMZM2G049695 mybr24 MYB-related-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 21,238,766 21,240,538 Zm00001d018320 GRMZM5G848185 mybr25 MYB-related-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 218,434,662 218,435,468 GRMZM2G112764 mybr26 MYB-related-transcription factor 26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,321,554 85,325,088 Zm00001d016784 GRMZM2G119133 mybr28 MYB-related-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,783,136 175,790,708 Zm00001d006791 AC199820.4_FG006 mybr29 MYB-related-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 216,766,315 216,767,167 Zm00001d038270 GRMZM2G002128 mybr3 MYB-related-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 152,871,846 152,873,850 Zm00001d019429 GRMZM2G169991 mybr30 MYB-related-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 33,320,576 33,321,683 Zm00001d029963 GRMZM2G088524 mybr32 MYB-related-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 96,573,408 96,575,415 Zm00001d024810 GRMZM2G422083 mybr33 MYB-related-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,887,562 88,889,100 Zm00001d049319 GRMZM2G101806 mybr34 MYB-related-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 26,178,971 26,180,511 Zm00001d011297 GRMZM2G065829 mybr35 MYB-related-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 146,093,892 146,095,667 Zm00001d002482 GRMZM2G014534 mybr36 MYB-related-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,635,509 13,636,726 Zm00001d042756 GRMZM2G027914 mybr37 MYB-related-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 179,001,730 179,003,192 Zm00001d016784 GRMZM2G059167 mybr38 MYB-related-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,783,136 175,790,708 Zm00001d044118 GRMZM2G451116 mybr39 MYB-related-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,812,499 219,812,786 Zm00001d005055 GRMZM2G032180 mybr4 MYB-related-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 156,345,821 156,346,504 Zm00001d013777 GRMZM2G088005 mybr40 MYB-related-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,923,773 19,930,072 Zm00001d044117 GRMZM2G150260 mybr41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,796,585 219,798,521 Zm00001d030738 GRMZM2G369993 mybr42 MYB-related-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 156,958,973 156,962,027 Zm00001d029875 GRMZM5G813892 mybr43 MYB-related-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 91,421,593 91,425,126 Zm00001d028851 GRMZM2G016020 mybr44 MYB-related-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,580,842 48,582,577 Zm00001d034945 GRMZM2G415077 mybr45 MYB-related-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 306,362,055 306,362,570 Zm00001d042849 GRMZM2G005112 mybr46 MYB-related-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 182,051,853 182,052,850 Zm00001d039049 GRMZM2G117497 mybr47 MYB-related-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 169,245,888 169,247,273 Zm00001d024547 GRMZM2G175265 mybr48 MYB-related-transcription factor 48 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 77,722,777 77,724,235 Zm00001d040385 GRMZM2G416708 mybr49 MYB-related-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 40,907,364 40,908,661 Zm00001d006848 GRMZM2G401809 mybr5 MYB-related-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 217,790,789 217,797,756 Zm00001d002281 GRMZM2G337011 mybr50 MYB-related-transcription factor 50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,495,581 9,496,234 Zm00001d018465 GRMZM5G811428 mybr51 MYB-related-transcription factor 51 merged into in v4 Chr5 221,328,960 221,335,180 Zm00001d017642 GRMZM2G029850 mybr52 MYB-related-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 202,881,513 202,884,506 Zm00001d047960 GRMZM2G152319 mybr54 MYB-related-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,288,097 146,293,266 Zm00001d012285 GRMZM2G143640 mybr55 MYB-related-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,871,807 171,872,971 Zm00001d007883 GRMZM2G398758 mybr56 MYB-related-transcription factor 56 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 241,676,336 241,677,632 Zm00001d039119 GRMZM2G139174 mybr57 MYB-related-transcription factor 57 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 170,394,361 170,395,337 Zm00001d051480 GRMZM2G170322 mybr58 MYB-related-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,038,260 160,042,852 Zm00001d028380 GRMZM2G085427 mybr59 MYB-related-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 32,678,385 32,692,019 Zm00001d044330 GRMZM2G087817 mybr6 MYB-related-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 225,344,316 225,349,224 Zm00001d010472 GRMZM5G845296 mybr60 MYB-related-transcription factor 60 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 117,108,453 117,110,290 Zm00001d000110 GRMZM2G139760 mybr61 MYB-related-transcription factor 61 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg52 187,964 193,349 Zm00001d037836 GRMZM2G531738 mybr62 MYB-related-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 139,238,531 139,250,622 Zm00001d035470 GRMZM2G447745 mybr63 MYB-related-transcription factor 63 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 28,271,626 28,278,463 Zm00001d051458 GRMZM2G118693 mybr64 MYB-related-transcription factor 64 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 159,348,371 159,355,666 Zm00001d026456 GRMZM2G546369 mybr65 MYB-related-transcription factor 65 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,121,659 146,122,160 Zm00001d018258 GRMZM2G049194 mybr67 MYB-related-transcription factor 67 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 217,527,909 217,540,053 Zm00001d025823 GRMZM2G410083 mybr68 MYB-related-transcription factor 68 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 130,739,138 130,741,408 Zm00001d045581 GRMZM2G135052 mybr69 MYB-related-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 27,258,563 27,264,640 GRMZM2G071648 mybr70 MYB-related-transcription factor 70 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 100,111,985 100,113,471 Zm00001d026362 GRMZM2G448104 mybr71 MYB-related-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,222,451 144,249,626 Zm00001d047716 GRMZM2G700011 mybr72 MYB-related-transcription factor 72 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 139,846,485 139,847,439 Zm00001d004681 GRMZM2G147152 mybr73 MYB-related-transcription factor 73 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 130,047,372 130,049,161 Zm00001d016000 GRMZM2G073826 mybr74 MYB-related-transcription factor 74 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 138,562,425 138,590,869 Zm00001d040464 GRMZM2G301642 mybr76 MYB-related-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 44,811,230 44,812,811 Zm00001d036632 GRMZM2G057408 mybr77 MYB-related-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 95,752,345 95,758,209 Zm00001d017782 AC204212.4_FG001 mybr78 MYB-related-transcription factor 78 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 206,597,153 206,597,443 GRMZM2G177760 mybr8 MYB-related-transcription factor 8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 62,405,348 62,407,503 Zm00001d024809 GRMZM2G121111 mybr81 MYB-related-transcription factor 81 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,853,062 88,854,141 Zm00001d020947 GRMZM2G103783 mybr82 MYB-related-transcription factor 82 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 137,482,526 137,485,454 Zm00001d049495 GRMZM2G098884 mybr83 MYB-related-transcription factor 83 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 32,390,178 32,404,793 Zm00001d024627 GRMZM2G108892 mybr84 MYB-related-transcription factor 84 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 81,009,835 81,021,978 Zm00001d010967 GRMZM2G089406 mybr85 MYB-related-transcription factor 85 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,268,693 135,275,891 Zm00001d046974 GRMZM2G170148 mybr86 MYB-related-transcription factor 86 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 113,773,320 113,784,564 Zm00001d009599 GRMZM2G158117 mybr87 MYB-related-transcription factor 87 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 72,403,032 72,404,407 Zm00001d053687 GRMZM2G064328 mybr88 MYB-related-transcription factor 88 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,036,651 239,041,066 Zm00001d043968 GRMZM2G121753 mybr89 MYB-related-transcription factor 89 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 215,274,473 215,277,881 Zm00001d024814 GRMZM2G030403 mybr9 MYB-related-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 89,275,166 89,276,263 Zm00001d014117 GRMZM2G046438 mybr90 MYB-related-transcription factor 90 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 33,025,257 33,030,501 Zm00001d028842 GRMZM2G111990 mybr91 MYB-related-transcription factor 91 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,424,617 48,430,126 Zm00001d049581 GRMZM2G157306 mybr92 MYB-related-transcription factor 92 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 36,062,634 36,069,198 Zm00001d003284 GRMZM2G135410 mybr93 MYB-related-transcription factor 93 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 38,748,934 38,756,211 Zm00001d016914 GRMZM2G328814 mybr94 MYB-related-transcription factor 94 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 179,738,727 179,740,023 Zm00001d034947 GRMZM2G115070 mybr95 MYB-related-transcription factor 95 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 306,417,787 306,418,293 Zm00001d014863 GRMZM2G145041 mybr96 MYB-related-transcription factor 96 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 66,024,695 66,027,984 Zm00001d044194 GRMZM2G057955 mybr97 MYB-related-transcription factor 97 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,629,262 221,630,634 Zm00001d036356 GRMZM2G111906 mybr98 MYB-related-transcription factor 98 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,555,310 85,558,301 Zm00001d013827 GRMZM2G024054 mybr99 MYB-related-transcription factor 99 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 21,505,251 21,508,854 Zm00001d000184 GRMZM2G034110 mybst1 single-repeat Myb protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project to mybr31, (Yilmaz et al 2009) B73V4_ctg181 314,008 317,339 Zm00001d030028 GRMZM2G001930 myc7 myc transcription factor7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) to bhlh149 Chr1 100,650,752 100,652,869 Zm00001d044303 AC155377.1_FG001 myo1 myosin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF104924 Chr3 224,622,779 224,641,871 Zm00001d018481 GRMZM2G332687 myo2 myosin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 221,569,552 221,583,567 Zm00001d032637 GRMZM2G113202 myo3 myosin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF147738 Chr1 232,683,293 232,699,590 Zm00001d025362 GRMZM2G027241 mzetc34 Chr10 115,708,853 115,710,913 Zm00001d042843 GRMZM2G449033 na1 nana plant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models based on GenBank NM_001156344 Chr3 181,821,465 181,822,989 Zm00001d014887 GRMZM2G057000 na2 nana plant2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Best et al., 2016 Chr5 67,026,171 67,030,023 Zm00001d053281 GRMZM2G096958 naat1 nicotianamine aminotransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 223,892,837 223,896,295 Zm00001d024778 GRMZM2G015605 nac1 NaCl stress protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 87,401,369 87,401,545 Zm00001d011555 GRMZM2G134717 nactf1 NAC-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,368,362 154,374,551 Zm00001d017396 GRMZM2G315140 nactf10 NAC-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 194,479,238 194,479,983 Zm00001d041886 AC211478.3_FG004 nactf100 NAC-transcription factor 100 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 142,368,826 142,369,290 Zm00001d050960 GRMZM2G104078 nactf101 NAC-transcription factor 101 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 133,589,483 133,593,214 Zm00001d048059 GRMZM5G894234 nactf102 NAC-transcription factor 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,085,887 149,093,085 Zm00001d002934 AC212859.3_FG008 nactf103 NAC-transcription factor 103 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 27,119,340 27,120,568 Zm00001d018435 GRMZM5G857701 nactf104 NAC-transcription factor 104 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 220,828,387 220,830,479 Zm00001d049687 GRMZM2G123246 nactf105 NAC-transcription factor 105 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 40,262,262 40,265,308 GRMZM2G031120 nactf106 NAC-transcription factor 106 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,134,957 254,136,440 Zm00001d010144 GRMZM2G172264 nactf107 NAC-transcription factor 107 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 101,257,298 101,258,431 Zm00001d041472 GRMZM2G114850 nactf108 NAC-transcription factor 108 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 122,367,956 122,372,020 Zm00001d042609 GRMZM2G014653 nactf109 NAC-transcription factor 109 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 173,458,717 173,460,818 Zm00001d028995 GRMZM2G031001 nactf11 NAC-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 54,034,211 54,036,320 Zm00001d024268 GRMZM2G167018 nactf110 NAC-transcription factor 110 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 60,226,179 60,228,837 Zm00001d003293 GRMZM2G450445 nactf111 NAC-transcription factor 111 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 39,094,599 39,100,476 Zm00001d038227 GRMZM2G456568 nactf112 NAC-transcription factor 112 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,995,956 152,000,206 Zm00001d014405 GRMZM2G063522 nactf113 NAC-transcription factor 113 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 44,701,128 44,705,362 Zm00001d031463 GRMZM2G430522 nactf114 NAC-transcription factor 114 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 191,081,875 191,084,627 Zm00001d049678 GRMZM2G069047 nactf115 NAC-transcription factor 115 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,731,374 39,733,815 Zm00001d037029 GRMZM2G041746 nactf116 NAC-transcription factor 116 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 109,567,045 109,568,953 Zm00001d045617 GRMZM2G163914 nactf117 NAC-transcription factor 117 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,909,570 28,912,421 Zm00001d008399 GRMZM2G109627 nactf118 NAC-transcription factor 118 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 7,349,376 7,352,005 Zm00001d035266 GRMZM2G393433 nactf119 NAC-transcription factor 119 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 18,673,737 18,675,956 Zm00001d049913 GRMZM2G125777 nactf12 NAC-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 52,248,471 52,252,923 Zm00001d021424 AC233865.1_FG003 nactf121 NAC-transcription factor 121 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 151,795,011 151,797,484 Zm00001d022424 GRMZM2G430849 nactf122 NAC-transcription factor 122 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 177,373,961 177,376,027 Zm00001d035084 GRMZM2G092465 nactf123 NAC-transcription factor 123 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 4,344,874 4,346,980 Zm00001d046126 GRMZM2G104074 nactf124 NAC-transcription factor 124 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 65,016,935 65,018,861 Zm00001d000112 GRMZM2G123667 nactf125 NAC-transcription factor 125 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg52 346,937 349,561 Zm00001d005028 GRMZM2G018436 nactf126 NAC-transcription factor 126 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 154,629,678 154,631,157 Zm00001d014843 GRMZM2G389557 nactf127 NAC-transcription factor 127 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 65,146,662 65,147,468 Zm00001d037315 GRMZM2G078954 nactf129 NAC-transcription factor 129 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 120,615,193 120,635,200 Zm00001d017084 GRMZM2G038073 nactf13 NAC-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 184,855,226 184,858,638 Zm00001d008403 GRMZM2G154182 nactf130 NAC-transcription factor 130 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 7,619,712 7,621,282 Zm00001d002828 GRMZM2G178998 nactf131 NAC-transcription factor 131 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 24,002,536 24,006,073 Zm00001d021818 GRMZM2G179885 nactf132 NAC-transcription factor 132 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 163,653,395 163,655,534 Zm00001d016814 GRMZM2G094067 nactf133 NAC-transcription factor 133 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 177,041,057 177,042,174 Zm00001d011589 GRMZM2G163843 nactf134 NAC-transcription factor 134 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,137,898 155,138,968 Zm00001d020446 GRMZM2G159094 nactf14 NAC-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 114,913,228 114,914,695 Zm00001d025684 GRMZM2G111770 nactf15 NAC-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 126,186,003 126,189,175 Zm00001d039506 GRMZM2G166721 nactf16 NAC-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,101,834 6,112,905 Zm00001d051140 GRMZM2G062009 nactf17 NAC-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 145,569,635 145,572,065 Zm00001d021423 GRMZM5G885329 nactf18 NAC-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 151,788,597 151,792,933 Zm00001d016119 GRMZM2G155816 nactf19 NAC-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 145,523,324 145,525,028 Zm00001d022517 GRMZM2G181605 nactf2 NAC-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 179,273,873 179,275,691 Zm00001d038221 GRMZM2G180328 nactf20 NAC-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,942,943 151,944,950 Zm00001d036050 GRMZM2G091490 nactf21 NAC-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 68,998,881 69,001,722 Zm00001d002285 GRMZM2G156977 nactf22 NAC-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,589,202 9,591,738 Zm00001d012527 GRMZM2G068973 nactf23 NAC-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 176,104,082 176,105,842 Zm00001d006053 GRMZM2G008374 nactf24 NAC-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 196,582,504 196,584,317 Zm00001d023294 GRMZM2G127379 nactf25 NAC-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,262,454 2,264,529 Zm00001d051879 GRMZM2G113950 nactf26 NAC-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 173,236,782 173,241,210 Zm00001d051294 GRMZM2G354151 nactf27 NAC-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 152,220,730 152,221,346 Zm00001d018702 GRMZM2G033014 nactf28 NAC-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,762,860 2,763,807 Zm00001d047554 GRMZM2G159500 nactf29 NAC-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 135,223,915 135,225,952 Zm00001d038207 GRMZM2G147867 nactf3 NAC-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,568,742 151,571,658 Zm00001d016950 GRMZM2G146380 nactf30 NAC-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 180,967,088 180,968,694 Zm00001d038289 GRMZM2G465835 nactf31 NAC-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,483,310 153,484,444 Zm00001d003414 GRMZM2G009892 nactf32 NAC-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 43,705,185 43,706,945 Zm00001d027459 GRMZM2G025642 nactf33 NAC-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,706,025 5,712,786 Zm00001d003080 AC208663.3_FG002 nactf34 NAC-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 31,373,154 31,374,242 Zm00001d006106 GRMZM2G179049 nactf35 NAC-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 198,198,555 198,200,085 Zm00001d003052 GRMZM2G081930 nactf36 NAC-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 30,534,378 30,537,200 Zm00001d050410 AC198937.4_FG005 nactf37 NAC-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 86,641,152 86,642,542 Zm00001d010227 GRMZM2G104400 nactf38 NAC-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 104,776,612 104,781,353 Zm00001d048347 GRMZM2G126817 nactf39 NAC-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,824,112 154,825,475 Zm00001d019207 GRMZM2G079632 nactf4 NAC-transcription factor 4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 21,927,733 21,929,407 Zm00001d050893 GRMZM5G898290 nactf40 NAC-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 128,778,456 128,780,327 Zm00001d052564 GRMZM2G439903 nactf41 NAC-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 193,274,586 193,275,656 Zm00001d036364 GRMZM2G074358 nactf42 NAC-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,809,798 85,811,340 Zm00001d030023 GRMZM2G082709 nactf43 NAC-transcription factor43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 100,385,980 100,387,952 Zm00001d028999 GRMZM2G011598 nactf44 NAC-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 54,263,185 54,265,683 Zm00001d048044 GRMZM2G126936 nactf45 NAC-transcription factor 45 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 148,682,940 148,684,179 Zm00001d045600 GRMZM2G440219 nactf46 NAC-transcription factor 46 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,126,449 28,127,152 Zm00001d008817 GRMZM2G112681 nactf47 NAC-transcription factor 47 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 21,509,525 21,515,943 Zm00001d031655 GRMZM2G054252 nactf48 NAC-transcription factor 48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,545,631 197,549,052 Zm00001d034601 GRMZM2G347043 nactf49 NAC-transcription factor 49 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 297,601,946 297,603,764 Zm00001d005208 GRMZM2G162739 nactf5 NAC-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 163,612,209 163,613,834 Zm00001d031164 GRMZM2G475014 nactf50 NAC-transcription factor 50 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 180,369,693 180,371,167 Zm00001d051956 GRMZM2G140901 nactf51 NAC-transcription factor 51 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,257,867 175,260,077 Zm00001d008801 GRMZM2G342647 nactf52 NAC-transcription factor 52 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,865,179 20,868,248 Zm00001d027530 GRMZM2G059428 nactf53 NAC-transcription factor 53 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 7,490,367 7,492,305 Zm00001d035076 GRMZM2G030325 nactf54 NAC-transcription factor 54 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 3,928,244 3,931,456 Zm00001d032182 GRMZM2G152543 nactf55 NAC-transcription factor 55 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 216,012,058 216,013,411 Zm00001d020982 GRMZM2G386163 nactf56 NAC-transcription factor 56 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 138,832,493 138,835,958 Zm00001d048493 GRMZM2G174070 nactf57 NAC-transcription factor 57 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 157,106,289 157,122,699 Zm00001d050870 AC205484.3_FG005 nactf58 NAC-transcription factor 58 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 127,748,628 127,751,133 Zm00001d018038 GRMZM2G100593 nactf59 NAC-transcription factor 59 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,630,308 212,636,028 Zm00001d013003 GRMZM2G018553 nactf6 NAC-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,977,575 2,979,101 Zm00001d013003 GRMZM2G336533 nactf60 NAC-transcription factor 60 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,977,575 2,979,101 Zm00001d024543 GRMZM2G003715 nactf61 NAC-transcription factor 61 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 77,529,347 77,533,684 Zm00001d034984 GRMZM2G052239 nactf62 NAC-transcription factor 62 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 798,676 799,889 Zm00001d021069 GRMZM2G054277 nactf63 NAC-transcription factor 63 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,080,504 142,083,844 Zm00001d028178 GRMZM2G077045 nactf64 NAC-transcription factor 64 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 25,566,760 25,575,059 Zm00001d025861 GRMZM2G043813 nactf65 NAC-transcription factor 65 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 131,797,076 131,799,846 Zm00001d040318 GRMZM2G064541 nactf66 NAC-transcription factor 66 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 37,808,012 37,817,360 Zm00001d023669 GRMZM2G083347 nactf67 NAC-transcription factor 67 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 14,594,105 14,596,141 Zm00001d045616 GRMZM2G459156 nactf68 NAC-transcription factor 68 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,908,014 28,908,461 Zm00001d037315 GRMZM2G379608 nactf69 NAC-transcription factor 69 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 120,615,193 120,635,200 Zm00001d034277 GRMZM2G163251 nactf7 NAC-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,351,666 288,353,564 Zm00001d043094 GRMZM2G312201 nactf70 NAC-transcription factor 70 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 189,129,421 189,137,112 Zm00001d003583 GRMZM2G099144 nactf71 NAC-transcription factor 71 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 49,012,079 49,013,406 Zm00001d011590 GRMZM2G163841 nactf72 NAC-transcription factor 72 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,141,956 155,142,894 Zm00001d018773 GRMZM2G479980 nactf73 NAC-transcription factor 73 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,825,498 4,826,987 Zm00001d013151 GRMZM2G112548 nactf74 NAC-transcription factor 74 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,453,473 5,454,938 Zm00001d049860 GRMZM2G100583 nactf75 NAC-transcription factor 75 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 48,975,342 48,977,969 Zm00001d003626 GRMZM2G316840 nactf76 NAC-transcription factor 76 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 50,875,247 50,876,743 Zm00001d049540 AC196475.3_FG005 nactf77 NAC-transcription factor 77 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 33,810,533 33,814,584 Zm00001d027395 GRMZM2G406204 nactf78 NAC-transcription factor 78 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,341,041 4,351,530 Zm00001d020972 GRMZM2G004531 nactf79 NAC-transcription factor 79 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 138,223,556 138,229,618 Zm00001d037315 GRMZM2G086768 nactf8 NAC-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 120,615,193 120,635,200 Zm00001d042246 GRMZM2G060116 nactf80 NAC-transcription factor 80 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 157,427,937 157,429,177 Zm00001d047554 GRMZM2G042494 nactf81 NAC-transcription factor 81 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 135,223,915 135,225,952 Zm00001d043921 GRMZM2G058518 nactf82 NAC-transcription factor 82 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 213,845,082 213,849,487 Zm00001d009244 GRMZM2G158204 nactf83 NAC-transcription factor 83 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 46,788,863 46,789,908 Zm00001d041791 GRMZM2G139700 nactf84 NAC-transcription factor 84 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 138,257,127 138,259,382 Zm00001d025483 GRMZM2G435824 nactf85 NAC-transcription factor 85 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,194,130 120,195,766 Zm00001d045463 GRMZM2G171395 nactf86 NAC-transcription factor 86 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 23,151,861 23,156,737 Zm00001d039004 GRMZM2G031200 nactf87 NAC-transcription factor 87 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,636,237 168,637,959 Zm00001d010239 GRMZM2G134687 nactf88 NAC-transcription factor 88 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 105,572,654 105,574,982 GRMZM2G340305 nactf89 NAC-transcription factor 89 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 203,127,019 203,131,923 Zm00001d011969 GRMZM2G134073 nactf9 NAC-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 165,320,638 165,322,096 Zm00001d042288 AC203535.4_FG002 nactf90 NAC-transcription factor 90 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 159,141,395 159,142,793 Zm00001d050039 GRMZM2G048826 nactf92 NAC-transcription factor 92 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 61,707,240 61,708,265 Zm00001d042758 GRMZM5G832473 nactf93 NAC-transcription factor 93 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 179,023,907 179,025,903 Zm00001d043877 GRMZM2G122615 nactf94 NAC-transcription factor 94 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 212,680,911 212,681,900 Zm00001d042580 GRMZM5G813651 nactf95 NAC-transcription factor 95 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 172,642,954 172,645,804 Zm00001d007850 GRMZM5G803888 nactf96 NAC-transcription factor 96 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 240,885,825 240,886,925 Zm00001d008308 GRMZM2G167492 nactf97 NAC-transcription factor 97 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 4,801,455 4,804,054 Zm00001d046246 GRMZM2G115721 nactf98 NAC-transcription factor 98 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 76,267,442 76,272,887 Zm00001d048059 GRMZM2G027309 nactf99 NAC-transcription factor 99 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,085,887 149,093,085 Zm00001d028918 GRMZM2G018941 nad1 NADH ubiquinone oxidoreductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T15339 Chr1 51,462,257 51,464,279 Zm00001d011732 GRMZM5G878308 nad2 NADH dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 160,220,321 160,223,281 Zm00001d009803 GRMZM2G008464 nad3 NADH-ubiquinone oxidorectase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 82,156,141 82,159,658 Zm00001d027493 GRMZM2G137312 nad4 NADH-ubiquinone oxidoreductase B18 subunit4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,542,791 6,543,117 Zm00001d027389 GRMZM2G014382 nad5 (homolog) NADH ubiquinone oxidoreductase B14 subunit5 (homolog) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,149,732 4,149,992 Zm00001d050874 GRMZM2G157019 nap1 nucleosome assembly protein1 Chr4 128,050,675 128,059,411 Zm00001d047651 GRMZM2G385200 nas1 nicotianamine synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhou et al 2013 Chr9 138,081,277 138,082,483 Zm00001d047658 GRMZM2G034956 nas10 nicotianamine synthase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models one of 3 gene model on B73_V2 that align to cDNA AB061270 reported in Mizuno et al 2003 Chr9 138,349,816 138,351,020 Zm00001d028888 GRMZM2G030036 nas2 nicotianamine synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhou et al 2013 Chr1 49,731,260 49,733,065 Zm00001d033496 GRMZM2G478568 nas3 nicotianamine synthase 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhou et al 2013 Chr1 264,462,071 264,463,236 Zm00001d013655 GRMZM2G439195 nas4 nicotianamine synthase 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhou et al 2013 Chr5 16,353,618 16,354,688 Zm00001d022557 GRMZM2G050108 nas5 nicotianamine synthase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhou et al 2013 Chr7 179,964,493 179,965,584 Zm00001d047639 GRMZM2G704488 nas6 nicotianamine synthase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhou et al 2013 Chr9 137,824,154 137,836,628 AC233955.1_FG003 nas7 nicotianamine synthase7 from Zhou et al 2013 Chr9 135,559,726 135,560,709 Zm00001d047656 GRMZM2G312481 nas8 nicotianamine synthase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhou et al 2013 Chr9 138,272,839 138,274,043 Zm00001d028887 GRMZM2G124785 nas9 nicotianamine synthase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhou et al 2013 Chr1 49,660,780 49,662,585 Zm00001d051847 GRMZM2G455658 natl1 nana2-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Best et al., 2016 Chr4 172,100,463 172,103,469 Zm00001d030868 GRMZM2G041050 nbcs1 nucleobase:cation symporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 164,196,407 164,205,410 Zm00001d042322 GRMZM2G085420 nbcs10 nucleobase:cation symporter10 Chr3 161,217,464 161,219,831 Zm00001d048960 GRMZM2G358791 nbcs11 nucleobase:cation symporter11 Chr4 10,883,172 10,884,815 Zm00001d049324 GRMZM2G080387 nbcs12 nucleobase:cation symporter12 Chr4 26,332,755 26,337,307 Zm00001d053604 nbcs13 nucleobase:cation symporter13 Chr4 236,138,479 236,139,918 Zm00001d053955 GRMZM2G027608 nbcs14 nucleobase:cation symporter14 low confidence Chr4 244,179,086 244,182,250 Zm00001d012935 GRMZM2G420823 nbcs15 nucleobase:cation symporter15 Chr5 2,204,320 2,225,211 Zm00001d018001 GRMZM5G812555 nbcs16 nucleobase:cation symporter16 Chr5 211,694,641 211,703,345 Zm00001d035993 GRMZM2G020580 nbcs17 nucleobase:cation symporter17 low confidence Chr6 65,161,702 65,163,282 Zm00001d020345 GRMZM2G414813 nbcs18 nucleobase:cation symporter18 Chr7 108,133,164 108,138,123 Zm00001d021163 GRMZM2G406315 nbcs19 nucleobase:cation symporter19 Chr7 144,473,134 144,476,244 Zm00001d032322 GRMZM2G115635 nbcs2 nucleobase:cation symporter2 Chr1 222,263,901 222,267,470 Zm00001d021519 GRMZM5G802881 nbcs20 nucleobase:cation symporter20 Chr7 154,989,542 154,995,305 Zm00001d022079 GRMZM2G136872 nbcs21 nucleobase:cation symporter21 Chr7 169,619,486 169,621,704 Zm00001d012307 GRMZM2G095611 nbcs22 nucleobase:cation symporter22 Chr8 172,160,772 172,166,114 Zm00001d012693 GRMZM2G437859 nbcs23 nucleobase:cation symporter23 Chr8 178,730,558 178,734,205 Zm00001d024918 GRMZM2G363292 nbcs24 nucleobase:cation symporter24 low confidence Chr10 94,913,396 94,916,114 Zm00001d034678 GRMZM2G045781 nbcs4 nucleobase:cation symporter4 Chr1 299,619,441 299,623,771 Zm00001d005590 GRMZM2G100484 nbcs5 nucleobase:cation symporter5 Chr2 180,005,803 180,013,761 Zm00001d006408 GRMZM2G171880 nbcs6 nucleobase:cation symporter6 Chr2 206,925,694 206,933,192 Zm00001d007116 nbcs7 nucleobase:cation symporter7 Chr2 222,533,371 222,540,067 Zm00001d007251 GRMZM2G068220 nbcs8 nucleobase:cation symporter8 Chr2 225,688,832 225,690,463 Zm00001d000434 GRMZM2G119970 nbcs9 nucleobase:cation symporter9 B73V4_ctg3 46,642 48,363 Zm00001d019648 GRMZM2G011129 nbp1 nucleic acid binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 47,990,040 47,993,872 Zm00001d017120 GRMZM2G031496 nbp35 nuclear binding protein35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,983,894 185,986,953 Zm00001d017072 GRMZM2G092447 nbr1a next to brca1a Chr5 184,389,616 184,394,455 Zm00001d003300 GRMZM2G139846 nbr1b next to brca1b Chr2 39,371,689 39,384,197 Zm00001d052581 GRMZM2G050959 nbs25 nucleotide-binding site25 Chr4 193,472,119 193,474,854 Zm00001d023265 GRMZM2G180244 nbs42 nucleotide-binding site42 Chr10 1,606,001 1,612,705 Zm00001d040627 GRMZM2G047616 nc1 Na+ content1 Chr3 54,948,300 54,950,704 Zm00001d014680 GRMZM2G135674 nc2 Na+ content2 Zhang et al., 2017 Chr5 58,716,795 58,719,001 Zm00001d031086 GRMZM2G407181 nced2 nine-cis-epoxycarotenoid dioxygenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr1 176,495,793 176,506,822 Zm00001d041319 GRMZM5G858784 nced3 nine-cis-epoxycarotenoid dioxygenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU955712 Chr3 111,919,013 111,920,827 Zm00001d007876 GRMZM2G408158 nced4 nine-cis-epoxycarotenoid dioxygenase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr2 241,535,851 241,537,578 Zm00001d018819 GRMZM2G417954 nced5 nine-cis-epoxycarotenoid dioxygenase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT062179 Chr7 6,342,456 6,344,361 Zm00001d051556 GRMZM2G110192 nced6 nine-cis-epoxycarotenoid dioxygenase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr4 162,737,448 162,739,364 Zm00001d022623 GRMZM2G330848 nced7 nine-cis-epoxycarotenoid dioxygenase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr7 181,400,407 181,408,261 Zm00001d017766 GRMZM2G150363 nced8 nine-cis-epoxycarotenoid dioxygenase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr5 206,199,093 206,201,012 Zm00001d013689 GRMZM5G838285 nced9 nine-cis-epoxycarotenoid dioxygenase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Owens et al., 2014 Chr5 17,465,790 17,467,595 Zm00001d051600 GRMZM2G015875 nch1 NMCP/CRWN-Homologous1 Chr4 164,094,048 164,100,719 Zm00001d043335 GRMZM2G320013 nch2 NMCP/CRWN-Homologous2 Chr3 196,984,833 196,991,102 Zm00001d021526 GRMZM2G134797 ndk1 nucleotide diphosphate kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 155,153,847 155,156,140 Zm00001d029969 GRMZM2G178576 ndpk1 nucleoside diphosphate kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Kopylov et al., 2015 Chr1 96,905,186 96,905,818 Zm00001d002358 GRMZM5G870342 nec4 necrotic4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from DQ250640 Chr2 10,781,211 10,785,395 Zm00001d016935 GRMZM2G075637 nfa104 nucleosome/chromatin assembly factor A104 Chr5 180,421,151 180,425,188 Zm00001d033247 GRMZM2G090217 nfc103a nucleosome/chromatin assembly factor C Gene model association inferred from similarity with B73 RefGen_v3 gene models based on genetic map, and alignment to sequence AF440219 Chr1 255,988,480 256,003,180 Zm00001d013702 GRMZM2G320606 nfc103b nucleosome/chromatin assembly factor C Gene model association inferred from similarity with B73 RefGen_v3 gene models based on genetic map position, and alignment to sequence AF440219 Chr5 17,942,846 17,948,363 Zm00001d022614 GRMZM2G032711 nfc104a nucleosome/chromatin assembly factor 104 Gene model association inferred from similarity with B73 RefGen_v3 gene models based on genetic map position, and alignment to sequence AY093418 Chr7 181,107,203 181,114,528 Zm00001d002659 GRMZM2G145968 nfd102 nucleosome/chromatin assembly factor D Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 18,564,412 18,572,241 Zm00001d052749 GRMZM2G125648 nfd106 nucleosome/chromatin assembly factor D Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF440223 and assigned by the Grassius project, (Yilmaz et al 2009) to hmg7 Chr4 199,665,081 199,666,577 Zm00001d008847 GRMZM2G032252 nfd110 nucleosome/chromatin assembly factor D110 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ244017; hmg14 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr8 22,501,898 22,508,623 Zm00001d038397 GRMZM5G804893 nfy2 NF-YB homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X59714 & assigned by the Grassius project, (Yilmaz et al 2009) to cadtfr17 Chr6 156,313,336 156,319,037 Zm00001d027874 GRMZM2G000686 nfya1 nuclear transcription factor y subunit a1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,038,734 16,042,002 GRMZM2G110210 nfyc2 nuclear transcription factor y subunit c2 Zhang et al., 2016 Chr1 73,920,871 73,922,877 Zm00001d024832 GRMZM2G063492 nhx2 Na+/H+ antiporter 2 from alignment to AY270037 & AY270038 Chr10 90,134,129 90,141,743 Zm00001d022504 GRMZM2G027851 nhx5 Na+/H+ antiporter 5 Chr7 179,047,417 179,052,457 Zm00001d031232 GRMZM2G098494 nhx7 Na+/H+ antiporter 7 Chr1 182,925,112 182,945,175 Zm00001d019978 GRMZM2G067747 nhx8 Na+/H+ antiporter 8 Chr7 81,486,383 81,509,317 Zm00001d018161 GRMZM2G102959 nii1 nitrate reductase1 Chr5 215,727,084 215,730,071 Zm00001d052165 GRMZM2G079381 nii2 nitrite reductase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Enrez Gene 542264 Chr4 181,552,730 181,556,339 Zm00001d016237 GRMZM2G041980 nip1a NOD26-like membrane intrinsic protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT040783 on v3 Chr5 151,835,826 151,838,198 Zm00001d018037 GRMZM2G028325 nip2a NOD26-like membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,580,241 212,583,888 Zm00001d037228 GRMZM2G137108 nip2b NOD26-like membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 116,839,545 116,843,339 Zm00001d044826 GRMZM2G081239 nip2c NOD26-like membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF342810 Chr9 4,090,119 4,093,538 Zm00001d017352 GRMZM2G178517 nit1 nitrilase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to sequence accession AY156979 Chr5 193,500,301 193,505,634 Zm00001d051214 GRMZM2G111225 nit2 nitrilase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_V2 alignment to sequence accession AY156978 from Park et al 2003 Chr4 148,918,694 148,925,044 Zm00001d002654 GRMZM2G129261 nkd1 naked endosperm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yi et al., 2015 Chr2 18,312,495 18,320,006 Zm00001d026113 GRMZM5G884137 nkd2 naked endosperm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yi et al., 2015 Chr10 138,719,539 138,725,394 Zm00001d039250 AC233880.1_FG006 nlp1 NLP-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 557,240 559,220 Zm00001d044519 GRMZM2G071322 nlp10 NLP-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 230,739,324 230,740,436 Zm00001d053437 GRMZM2G472589 nlp11 NLP-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 231,345,494 231,350,265 Zm00001d018035 GRMZM2G105641 nlp12 NLP-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,546,517 212,547,423 Zm00001d021442 GRMZM2G053298 nlp13 NLP-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 152,335,837 152,341,211 Zm00001d044825 GRMZM2G392306 nlp14 NLP-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 3,987,885 3,992,205 Zm00001d015201 GRMZM2G042278 nlp15 NLP-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 78,984,402 78,987,766 Zm00001d041160 GRMZM2G004663 nlp16 NLP-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 100,860,278 100,861,343 Zm00001d006293 GRMZM2G048582 nlp17 NLP-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 203,858,974 203,864,535 Zm00001d003176 GRMZM2G031398 nlp3 NLP-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 34,606,365 34,611,108 Zm00001d009017 GRMZM2G375675 nlp4 NLP-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 30,237,363 30,243,290 Zm00001d011142 AC207342.3_FG001 nlp5 NLP-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 140,372,645 140,374,170 Zm00001d039266 GRMZM2G475305 nlp6 NLP-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 826,815 835,054 Zm00001d027510 GRMZM2G109509 nlp7 NLP-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 7,075,161 7,079,887 Zm00001d037786 GRMZM2G176655 nlp8 NLP-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 137,825,036 137,834,294 Zm00001d025757 GRMZM2G105004 nlp9 NLP-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 128,605,358 128,610,245 Zm00001d049995 GRMZM2G568636 nnr1 nitrate reductase(NADH)1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 58,642,687 58,647,338 Zm00001d018206 GRMZM5G878558 nnr2 nitrate reductase2 was GRMZM2G104898 on RefGen_v1 Chr5 216,589,277 216,592,402 Zm00001d031769 GRMZM2G076723 nnr4 nitrate reductase4 Chr1 201,195,222 201,199,817 Zm00001d052139 GRMZM2G428027 nnr5 nitrate reductase5 Chr4 180,632,525 180,635,840 Zm00001d027722 GRMZM2G027821 nod1 narrow odd dwarf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Rosa et al, 2017 Chr1 12,170,863 12,175,121 Zm00001d049824 AC233751.1_FG002 not1 neighbor of tga1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Preston et al 2011 Chr4 46,625,882 46,630,722 Zm00001d024587 GRMZM2G086496 npf1 nitrate transporter/peptide transporter family1 Wen et al., 2017 Chr10 79,465,955 79,472,158 Zm00001d029932 GRMZM2G161459 npf2 nitrate transporter/peptide transporter family2 Wen et al., 2017 Chr1 94,940,936 94,945,167 Zm00001d029933 GRMZM2G112154 npf3 nitrate transporter/peptide transporter family3 Chr1 95,012,189 95,014,753 Zm00001d027285 GRMZM2G161483 npf4 nitrate transporter/peptide transporter family4 Chr1 1,816,514 1,818,676 Zm00001d017095 GRMZM2G179294 npf5 nitrate transporter/peptide transporter family5 Chr5 185,262,626 185,263,851 Zm00001d012659 GRMZM5G825226 npi112b Chr8 178,077,109 178,082,439 Zm00001d007075 GRMZM2G035985 npi113b Chr2 221,665,730 221,685,464 Zm00001d008215 GRMZM2G140885 npi114a Chr8 1,460,764 1,465,581 Zm00001d034507 GRMZM2G474685 npi241a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 294,961,663 294,963,739 Zm00001d028622 GRMZM5G801409 npi242b Chr1 41,158,763 41,162,190 Zm00001d038091 GRMZM2G054056 npi252 Chr6 147,431,407 147,442,852 Zm00001d026479 GRMZM2G143356 npi254b Chr10 146,713,592 146,719,187 Zm00001d009600 GRMZM2G077546 npi260b Chr8 72,497,718 72,508,337 Zm00001d021858 npi263 Chr7 164,638,779 164,645,180 Zm00001d025477 GRMZM2G424348 npi264 Chr10 120,040,997 120,041,623 Zm00001d052519 GRMZM2G051697 npi270 Chr4 191,968,167 191,972,580 Zm00001d039709 GRMZM2G459861 npi276a Chr3 12,747,718 12,750,928 Zm00001d023393 GRMZM2G350841 npi285a(cac) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 4,656,986 4,661,017 Zm00001d018334 GRMZM2G128358 npi288a Chr5 218,621,829 218,623,785 Zm00001d021895 GRMZM5G860235 npi352 Chr7 165,558,401 165,560,667 Zm00001d036739 GRMZM2G158668 npi393 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 99,515,967 99,519,158 Zm00001d020953 GRMZM2G043254 npi394 Chr7 137,599,102 137,608,563 Zm00001d012464 GRMZM2G069260 npi414a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 174,970,601 174,974,661 Zm00001d022285 GRMZM2G027217 npi433 low confidence Chr7 174,463,306 174,464,790 Zm00001d024672 GRMZM2G304010 npi445a Chr10 83,125,173 83,126,249 Zm00001d032605 GRMZM2G346455 npi447a Chr1 231,856,279 231,868,220 Zm00001d044365 GRMZM2G033867 npi457 Chr3 226,293,999 226,296,387 Zm00001d052401 GRMZM2G174739 npi570 Chr4 189,173,442 189,175,233 Zm00001d008689 GRMZM2G061187 npi585a Chr8 17,230,629 17,233,767 Zm00001d002796 GRMZM2G123373 npi587 Chr2 22,828,445 22,832,747 Zm00001d019254 npi600 Chr7 24,099,845 24,101,382 Zm00001d003037 GRMZM5G869984 npi607 Chr2 30,056,009 30,059,224 Zm00001d022636 GRMZM2G154460 npi611a Chr7 181,973,655 181,975,715 Zm00001d038072 GRMZM2G023836 npi616a Chr6 146,915,089 146,916,918 Zm00001d014391 GRMZM2G069198 nrat1 nramp aluminum transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guimaraes et al., 2014 Chr5 44,425,623 44,431,178 Zm00001d040189 GRMZM2G062650 nrp1 no-apical-meristem-related protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) to nactf128 Chr3 31,401,124 31,403,248 Zm00001d002125 GRMZM2G054225 nrpd2/e2 nuclear RNA polymerase D2/E2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from GQ356034 and GQ453405 Chr2 6,290,891 6,302,652 Zm00001d054060 GRMZM2G010251 nrt1 nitrate transport1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY659965 Chr4 245,649,222 245,650,796 Zm00001d054057 GRMZM2G010280 nrt2 nitrate transport2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ344451 Chr4 245,638,263 245,639,837 Zm00001d014976 GRMZM2G163866 nrt3 nitrate transport3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY968681 Chr5 70,820,654 70,822,222 Zm00001d003287 GRMZM2G163494 nrt4 nitrate transport4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001112454 Chr2 38,811,050 38,812,608 Zm00001d029457 GRMZM2G048324 nrx1 nucleoredoxin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT037898 Chr1 71,670,964 71,675,538 Zm00001d004889 GRMZM2G069028 ns1 narrow sheath1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 147,004,057 147,005,221 Zm00001d052598 ns2 narrow sheath2 v4 Chr4 194,314,663 194,315,808 Zm00001d048524 GRMZM2G110258 nta1 N-terminal amidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 157,772,529 157,785,975 Zm00001d031627 GRMZM2G407249 ntf1 nuclear transport factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 196,865,024 196,868,008 Zm00001d049826 GRMZM2G006953 ntf2 nuclear transport factor2 Chr4 46,705,236 46,707,933 Zm00001d021226 GRMZM2G073377 nthr3 anther-specific protein 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT042787 Chr7 146,556,758 146,557,628 Zm00001d020087 GRMZM2G031461 nudix1 NUDIX domain hydrolase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 91,033,435 91,038,130 Zm00001d045601 GRMZM2G041668 nut1 necrotic upper tips1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project to nactf91 (Yilmaz et al 2009) Chr9 28,127,424 28,127,858 Zm00001d039312 GRMZM2G170013 nyc1 non-yellow coloring1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chan et al., 2017 Chr3 1,461,989 1,466,446 Zm00001d052110 GRMZM2G449909 o1 opaque endosperm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Wang et al., 2012 Chr4 179,900,072 179,926,942 Zm00001d033654 GRMZM2G346263 o10 opaque endosperm10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yao et al., 2016 Chr1 269,766,090 269,773,110 Zm00001d003677 GRMZM2G147685 o11 opaque endosperm11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project to bhlh167, (Yilmaz et al 2009) Chr2 53,849,188 53,854,880 Zm00001d018971 GRMZM2G015534 o2 opaque endosperm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 11,075,377 11,078,232 Zm00001d020537 GRMZM2G142873 o5 opaque endosperm5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of fl cDNA BT042676 (Myers et al 2011) Chr7 121,388,769 121,395,911 Zm00001d026649 GRMZM2G074759 o7 opaque endosperm7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Miclaus et al., 2011 Chr10 149,382,212 149,384,169 Zm00001d030617 GRMZM2G479885 obf1 octopine synthase binding factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) to bzip39 Chr1 148,806,103 148,807,147 Zm00001d043153 GRMZM2G019907 obf3 octopine synthase binding factor3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT034456 Chr3 190,250,038 190,259,712 Zm00001d012553 GRMZM2G125243 obf4 octopine synthase binding factor4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT066069 Chr8 176,514,160 176,521,162 Zm00001d008739 GRMZM2G175171 ocd1 oxalyl-CoA decarboxylase1 Chr8 18,568,768 18,573,047 Zm00001d040090 GRMZM2G026643 ocl1 outer cell layer1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 27,133,419 27,141,104 Zm00001d026088 AC235534.1_FG007 ocl2 outer cell layer2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 138,129,427 138,138,311 Zm00001d021236 GRMZM2G116658 ocl3 outer cell layer3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 146,658,310 146,664,494 Zm00001d030069 GRMZM2G123140 ocl4 outer cell layer4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 103,280,320 103,286,276 Zm00001d049443 GRMZM2G130442 ocl5a outer cell layer5a Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 30,518,856 30,525,048 Zm00001d025240 GRMZM2G151041 odo1 alpha keto dehydrogenase candidate1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 110,657,182 110,663,551 Zm00001d021703 GRMZM2G058070 oec17 oxygen evolving complex, 17kDa homolog Chr7 160,760,828 160,761,969 GRMZM2G021617 oec2 oxygen evolving complex2 Chr9 57,921,763 57,923,880 Zm00001d036535 GRMZM2G175562 oec33 oxygen evolving complex, 33kDa subunit Gene model association inferred from similarity with B73 RefGen_v3 gene models chr 6 B73_V2 alignment to EU959681 Chr6 91,338,946 91,340,275 Zm00001d014564 GRMZM2G113349 oec33b oxygen-evolving complex 33 kda protein b Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 alignment to cDNA EU959477 Chr5 53,469,769 53,471,323 Zm00001d027453 GRMZM2G055737 ofp1 OVATE-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,589,770 5,590,513 Zm00001d004881 GRMZM2G032478 ofp10 OVATE-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 146,206,362 146,207,063 Zm00001d004882 GRMZM2G130131 ofp11 OVATE-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 146,379,218 146,380,414 Zm00001d007168 GRMZM2G359116 ofp12 OVATE-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 223,714,590 223,715,291 Zm00001d039313 GRMZM2G169973 ofp13 OVATE-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,469,769 1,470,902 Zm00001d042752 GRMZM2G434098 ofp14 OVATE-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,900,363 178,901,103 Zm00001d042753 GRMZM2G133311 ofp15 OVATE-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,923,376 178,924,152 Zm00001d043046 GRMZM2G330159 ofp16 OVATE-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 187,298,260 187,299,366 Zm00001d043470 GRMZM2G127431 ofp17 OVATE-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 201,134,332 201,135,348 Zm00001d043535 GRMZM2G023285 ofp18 OVATE-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 203,077,676 203,078,698 Zm00001d044167 AC198725.4_FG004 ofp19 OVATE-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 220,883,427 220,884,707 Zm00001d027739 GRMZM2G096252 ofp2 OVATE-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,400,468 12,401,019 Zm00001d044357 GRMZM2G150823 ofp20 OVATE-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 225,734,113 225,734,829 Zm00001d052605 GRMZM2G013302 ofp21 OVATE-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 194,504,909 194,506,069 Zm00001d052606 GRMZM2G013271 ofp22 OVATE-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 194,544,003 194,544,830 Zm00001d017606 GRMZM2G041761 ofp23 OVATE-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,436,779 201,437,657 Zm00001d034973 GRMZM2G436659 ofp24 OVATE-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 479,943 480,971 Zm00001d037814 GRMZM2G100133 ofp25 OVATE-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 138,654,839 138,655,693 Zm00001d038283 GRMZM2G122709 ofp26 OVATE-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,288,564 153,289,250 Zm00001d038284 GRMZM2G430871 ofp27 OVATE-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,339,730 153,340,491 Zm00001d038473 GRMZM2G026927 ofp28 OVATE-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,066,140 158,067,240 Zm00001d038714 GRMZM2G127680 ofp29 OVATE-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 163,229,334 163,230,281 Zm00001d000458 GRMZM2G121706 ofp3 OVATE-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg119 9,942 10,808 Zm00001d020198 GRMZM2G037043 ofp30 OVATE-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 98,791,002 98,791,772 Zm00001d022446 GRMZM5G845472 ofp31 OVATE-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 177,907,261 177,908,001 Zm00001d008785 GRMZM2G001721 ofp32 OVATE-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,945,414 19,946,016 Zm00001d009993 GRMZM2G067376 ofp33 OVATE-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 93,658,817 93,659,596 Zm00001d011410 GRMZM2G028982 ofp34 OVATE-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,778,971 149,780,170 Zm00001d012282 GRMZM2G085035 ofp35 OVATE-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,844,019 171,844,762 Zm00001d012498 AC204502.4_FG006 ofp36 OVATE-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 175,509,375 175,510,460 Zm00001d047346 GRMZM2G137869 ofp37 OVATE-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 127,019,320 127,020,147 Zm00001d023455 GRMZM2G057753 ofp38 OVATE-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,094,302 6,095,315 Zm00001d023456 AC187891.3_FG006 ofp39 OVATE-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,099,071 6,099,862 Zm00001d029067 GRMZM2G075988 ofp4 OVATE-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 56,999,172 57,000,011 Zm00001d025534 GRMZM2G432846 ofp40 OVATE-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 121,608,318 121,609,103 Zm00001d026061 GRMZM2G040673 ofp41 OVATE-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 137,306,305 137,307,456 Zm00001d026661 GRMZM2G106836 ofp42 OVATE-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 149,588,101 149,588,802 Zm00001d026663 GRMZM2G106781 ofp43 OVATE-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 149,603,978 149,604,751 Zm00001d029718 GRMZM2G039312 ofp5 OVATE-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 83,823,527 83,824,309 Zm00001d032903 GRMZM2G095452 ofp6 OVATE-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 242,399,005 242,399,814 Zm00001d002594 GRMZM2G164428 ofp7 OVATE-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 16,330,379 16,331,572 Zm00001d003521 GRMZM2G053985 ofp8 OVATE-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 46,609,159 46,609,809 Zm00001d003762 GRMZM2G055257 ofp9 OVATE-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 57,854,202 57,855,561 Zm00001d016801 GRMZM2G139031 ogg1 8-oxoguanine DNA glycolyase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 176,395,232 176,398,898 Zm00001d034457 GRMZM2G016150 ohp1 opaque2 heterodimerizing protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 293,562,779 293,567,510 Zm00001d013074 GRMZM2G007063 ohp2 opaque2 heterodimerizing protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 4,364,088 4,367,769 Zm00001d011256 GRMZM2G143469 ohp3 opaque2 heterodimerizing protein3 Chr8 144,697,819 144,699,023 Zm00001d002768 GRMZM2G337229 ole1 oleosin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 22,071,813 22,072,283 Zm00001d013494 AC206941.2_FG002 ole3 oleosin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 12,718,250 12,718,810 Zm00001d033612 GRMZM2G480954 ole4 oleosin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U13702 Chr1 268,595,955 268,596,485 Zm00001d027578 GRMZM2G018417 ommp1 outer mitochondrial membrane porin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU956492 Chr1 8,363,014 8,365,720 Zm00001d036293 GRMZM2G127948 omt1 Caffeoyl-CoA O-methyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2013 Chr6 82,193,275 82,194,916 Zm00001d045206 GRMZM2G099363 omt2 Caffeoyl CoA O-methyltransferase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AI637136 Chr9 16,076,158 16,081,626 Zm00001d024596 GRMZM2G077486 omt3 Caffeoyl CoA O-methyltransferase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 79,830,935 79,838,588 Zm00001d052841 GRMZM2G332522 omt4 Caffeoyl CoA O-methyltransferase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 202,392,492 202,393,630 Zm00001d044908 GRMZM2G106303 opr1 12-oxo-phytodienoic acid reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to AY108052 Chr9 6,927,730 6,929,377 Zm00001d044906 GRMZM2G000236 opr2 12-oxo-phytodienoic acid reductase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B72_v2 alignment to AY921639 Chr9 6,893,412 6,895,013 Zm00001d037182 GRMZM2G156712 opr3 12-oxo-phytodienoic acid reductase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to cDNA AY921640 on B73_V@ Chr6 114,979,500 114,981,186 Zm00001d011097 opr4 12-oxo-phytodienoic acid reductase4 from alignment to AY921641 Chr8 138,824,703 138,825,854 Zm00001d003584 GRMZM2G087192 opr5 12-oxo-phytodienoic acid reductase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to cDNA AY921642 Chr2 49,052,848 49,056,045 Zm00001d040842 GRMZM2G068947 opr6 12-oxo-phytodienoic acid reductase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 alignment to cDNA AY921643 Chr3 70,151,471 70,153,788 Zm00001d032049 GRMZM2G148281 opr7 12-oxo-phytodienoic acid reductase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment on B73_v2 of cDNA AY921644 Chr1 210,749,060 210,752,906 Zm00001d050107 GRMZM2G082087 opr8 12-oxo-phytodienoic acid reductase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to cDNA AY921645 Chr4 66,086,547 66,090,296 Zm00001d045080 GRMZM2G455243 orc1 origin recognition complex1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,803,157 11,825,109 Zm00001d017423 GRMZM2G117238 orc2 origin recognition complex2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 195,641,813 195,645,583 Zm00001d031073 GRMZM2G381822 orc3 origin recognition complex3 Chr1 175,980,669 175,983,357 Zm00001d043840 GRMZM5G876520 orc4 origin recognition complex4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 211,465,861 211,479,699 Zm00001d013238 GRMZM2G089556 orc5 origin recognition complex5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU954679 Chr5 6,855,758 6,858,257 GRMZM5G834666 orf140-b (mt) Wei & Han, 2016 ChrMt 265,988 266,410 Zm00001d037289 GRMZM2G156255 ork1 outward rectifying potassium channel1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 119,523,282 119,528,893 Zm00001d049610 GRMZM2G169593 orp1 orange pericarp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 37,573,636 37,577,238 Zm00001d024702 GRMZM2G005024 orp2 orange pericarp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 84,130,306 84,133,108 Zm00001d017930 GRMZM5G899787 orrm1 organelle RRM protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sun et al., 2013 Chr5 210,256,398 210,262,442 Zm00001d019165 GRMZM2G462325 ost1 oligosaccharide transferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 19,783,137 19,789,350 Zm00001d017751 GRMZM2G325019 otp51 organelle transcript processing51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr5 205,889,941 205,895,577 Zm00001d023929 GRMZM2G383088 oxmt1 oxo-glutarate/malate transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of cDNA AB112936 to B73_v2 assemgly Chr10 29,148,234 29,154,174 Zm00001d023536 GRMZM2G419806 oy1 oil yellow1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 9,162,610 9,167,073 Zm00001d026147 GRMZM5G822829 P plant color component at R1 Gene model association inferred from similarity with B73 RefGen_v3 gene models This is probably the correct locus associated with this gene model in B73, which is r1-r. Chr10 139,780,968 139,790,276 Zm00001d028842 GRMZM2G084799 p1 pericarp color1 Classical Gene Chr1 48,424,617 48,430,126 Zm00001d028842 GRMZM2G057027 p2 pericarp color2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 48,424,617 48,430,126 Zm00001d040351 GRMZM2G178460 paac1 putative ADP-ATP carrier1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 39,393,105 39,396,421 Zm00001d017617 GRMZM2G058432 pac1 pale aleurone color1 Chr5 201,803,815 201,807,716 Zm00001d017274 GRMZM2G074604 pal1 phenylalanine ammonia lyase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 191,418,711 191,422,345 Zm00001d003016 GRMZM2G441347 pal2 phenylalanine ammonia lyase2 from: BT069509 Chr2 29,538,173 29,541,434 Zm00001d051161 GRMZM2G160541 pal3 phenylalanine ammonia lyase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: M95077 (chr 4 hit) Chr4 146,706,971 146,710,589 Zm00001d051166 GRMZM2G063917 pal4 phenylalanine ammonia lyase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 146,846,109 146,848,259 Zm00001d051163 GRMZM2G081582 pal5 phenylalanine ammonia lyase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 146,793,740 146,798,809 Zm00001d003015 GRMZM2G118345 pal6 phenylalanine ammonia lyase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 29,467,931 29,470,598 Zm00001d017279 GRMZM2G170692 pal7 phenylalanine ammonia lyase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Rius et al., 2016 Chr5 191,539,072 191,541,219 Zm00001d017276 GRMZM2G334660 pal8 phenylalanine ammonia lyase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 191,474,696 191,476,810 Zm00001d017275 GRMZM2G029048 pal9 phenylalanine ammonia lyase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 191,467,430 191,471,500 Zm00001d031437 GRMZM5G836190 pan1 pangloss1 Gene model association inferred from similarity with B73 RefGen_v3 gene models sequence alignment to B73_v2 by DNA accession FJ231525 (Nov 2011 M Schaeffer) Chr1 190,179,856 190,183,037 Zm00001d007862 GRMZM2G034572 pan2 pangloss2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2012 Chr2 241,117,670 241,125,665 Zm00001d024281 GRMZM2G034152 pao1 polyamine oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 61,486,928 61,491,037 Zm00001d009231 GRMZM2G124718 parp1 poly(ADP-ribose) polymerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT034831 Chr8 45,256,131 45,261,408 Zm00001d005168 GRMZM5G831712 parp2 poly(ADP-ribose) polymerase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 162,092,060 162,124,973 Zm00001d027456 GRMZM2G177508 pba1 PBA1 homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU962752 (chr1 hit) Chr1 5,661,737 5,663,089 Zm00001d005100 GRMZM2G146283 pbf1 prolamin-box binding factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) to dof3; renamed dof103; subsequesntly found indentical to pbf1 Chr2 158,142,366 158,156,919 Zm00001d047382 GRMZM2G123709 pc326 plasmacytoma 326 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 128,261,281 128,263,941 Zm00001d028471 GRMZM2G001696 pck1 phosphoenolpyruvate carboxykinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to cDNA AB018744 Chr1 35,960,441 35,964,750 Zm00001d047893 GRMZM5G870932 pck2 phosphoenolpyruvate carboxykinase homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT054804 Chr9 144,511,510 144,516,403 Zm00001d018415 GRMZM2G030523 pcna1 proliferating cell nuclear antigen1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 220,297,125 220,299,214 Zm00001d051995 GRMZM2G108712 pcna2 proliferating cell nuclear antigen2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez gene 542357 Chr4 176,048,087 176,049,833 Zm00001d034733 GRMZM2G458549 pco060326 Chr1 300,954,125 300,961,062 Zm00001d051809 GRMZM2G168337 pco061578 Chr4 170,142,800 170,148,637 Zm00001d011782 GRMZM2G168375 pco061803 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 161,475,214 161,477,513 Zm00001d004979 GRMZM2G123660 pco061840b Chr2 151,892,428 151,907,067 Zm00001d017601 GRMZM2G072911 pco065449 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,313,634 201,316,918 Zm00001d002027 GRMZM2G086801 pco066126 Chr2 4,656,652 4,661,418 Zm00001d038456 GRMZM2G410812 pco066521 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 157,648,981 157,650,905 Zm00001d043288 GRMZM2G000615 pco067132 Chr3 194,540,664 194,547,494 Zm00001d029750 GRMZM2G097249 pco071369 Chr1 85,465,506 85,472,221 Zm00001d031941 GRMZM2G167548 pco077760 Chr1 207,588,117 207,591,806 Zm00001d025175 GRMZM2G547542 pco078062b Chr10 107,678,368 107,680,629 Zm00001d008610 GRMZM2G011213 pco079267 Chr8 14,450,353 14,453,064 Zm00001d048949 GRMZM2G117971 pco080661a Noonan et al., 2017 Chr4 10,536,338 10,537,204 Zm00001d001966 GRMZM2G061745 pco082032 Chr2 3,608,159 3,611,883 Zm00001d027231 GRMZM2G059865 pco082477 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 50,877 55,716 GRMZM2G102548 pco083348 Chr1 61,145,033 61,150,184 GRMZM2G081114 pco087746 Chr1 294,892,538 294,893,344 Zm00001d042639 GRMZM2G431006 pco088261 Chr3 174,860,172 174,893,608 Zm00001d033986 GRMZM2G009895 pco090181a Chr1 280,286,080 280,289,975 Zm00001d025873 GRMZM2G146809 pco090777 Chr10 132,238,491 132,239,276 Zm00001d024886 GRMZM2G110567 pco091486(738) Chr10 92,761,097 92,763,080 Zm00001d014078 GRMZM2G324540 pco093291 Chr5 31,710,721 31,721,035 Zm00001d017330 GRMZM2G053236 pco093974b from amino acid sequence of BT065143 Chr5 193,146,758 193,147,606 Zm00001d031849 GRMZM2G115750 pco095480 from Ganal et al 2011 Chr1 203,993,172 203,996,773 Zm00001d023537 GRMZM2G118316 pco098048 Chr10 9,330,103 9,346,965 Zm00001d027618 GRMZM2G149257 pco098394 Chr1 9,112,947 9,115,668 Zm00001d018370 GRMZM2G178958 pco101682(581) Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY103547 Chr5 219,420,754 219,424,631 GRMZM2G388453 pco101682(8) Chr8 71,583,929 71,644,926 Zm00001d034887 GRMZM2G417843 pco102265b Chr1 304,719,959 304,724,455 Zm00001d019125 GRMZM2G125516 pco103663 Chr7 18,150,927 18,154,824 Zm00001d014275 GRMZM2G152853 pco105903 Chr5 38,929,696 38,950,577 Zm00001d045883 pco107884 Chr9 45,473,833 45,477,106 Zm00001d021162 GRMZM2G033199 pco110957 Chr7 144,351,398 144,353,422 Zm00001d025008 GRMZM2G084729 pco111589 Chr10 99,428,647 99,432,260 Zm00001d032505 GRMZM2G125617 pco115388 Chr1 228,773,535 228,782,034 Zm00001d042454 GRMZM2G058250 pco116928b Chr3 168,343,337 168,345,376 Zm00001d001929 GRMZM2G070389 pco118092 Chr2 3,079,742 3,089,142 Zm00001d039613 GRMZM2G083418 pco120183 Chr3 9,084,078 9,086,850 Zm00001d006866 GRMZM2G124335 pco121523 Chr2 218,206,668 218,211,567 Zm00001d025140 GRMZM2G148508 pco123247b from AY105008 to hit on 10L Chr10 106,280,712 106,283,527 Zm00001d028692 GRMZM2G043291 pco124824 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,328,452 43,334,856 Zm00001d014920 GRMZM2G374574 pco125096 Chr5 68,358,713 68,371,222 Zm00001d044831 GRMZM2G124288 pco127498b Chr9 4,432,965 4,441,480 Zm00001d012260 GRMZM2G075956 pco129491 Chr8 171,319,753 171,321,312 Zm00001d003172 GRMZM2G178005 pco129934 Chr2 34,447,811 34,448,392 Zm00001d024203 pco130702b Chr10 55,739,987 55,744,458 Zm00001d016802 GRMZM2G006791 pco131924a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 176,496,325 176,501,360 Zm00001d051203 GRMZM2G111756 pco133717 Chr4 148,592,297 148,593,612 Zm00001d037811 GRMZM2G055678 PCO134814 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 138,545,312 138,550,589 Zm00001d013886 GRMZM2G026892 PCO135705 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 23,781,964 23,784,644 Zm00001d044232 GRMZM2G045275 pco135758 Gene model association inferred from similarity with B73 RefGen_v3 gene models Jamann et al., 2017 Chr3 222,542,813 222,548,835 Zm00001d037323 GRMZM2G047720 pco136292 Chr6 121,112,271 121,113,696 Zm00001d016720 GRMZM2G451314 pco136495a Chr5 174,138,611 174,142,966 Zm00001d021834 GRMZM5G827186 pco136752 was GRMZM2G437206 in v1 Chr7 164,113,639 164,118,063 Zm00001d015986 GRMZM2G049021 pco137163 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 136,921,862 136,930,137 Zm00001d001803 GRMZM2G051917 pco137413a Chr2 1,245,474 1,250,143 Zm00001d026363 GRMZM2G180471 pco139265 Chr10 144,369,745 144,382,245 Zm00001d037354 GRMZM2G174315 pco139551 Chr6 122,602,767 122,607,391 Zm00001d038266 GRMZM2G701180 pco140565 Chr6 152,695,706 152,701,233 Zm00001d038594 GRMZM2G073535 pco141133 from Ganal et al 2011 Chr6 160,662,673 160,664,840 Zm00001d013566 GRMZM2G166082 pco143498 Chr5 14,436,590 14,439,688 Zm00001d023650 GRMZM2G110381 pco144235 Chr10 13,640,707 13,642,581 Zm00001d021388 GRMZM2G135651 pco147657 Chr7 150,652,542 150,658,382 Zm00001d028054 GRMZM2G004397 pco148373a Chr1 21,770,615 21,773,945 Zm00001d009579 GRMZM2G113720 pco154872 Chr8 71,612,135 71,614,100 Zm00001d001820 GRMZM2G084958 pcr1 protochlorophyllide reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence accession EU963402.1 GI:195627379 | PCO151862 AY106314.1 GI:21209392 | Chr2 1,439,871 1,441,447 Zm00001d010588 AC197705.4_FG001 pdc1 pyruvate decarboxylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from X17555 Chr8 121,126,170 121,128,814 Zm00001d008651 GRMZM2G038821 pdc2 pyruvate decarboxylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 15,983,269 15,986,705 Zm00001d028759 GRMZM2G087186 pdc3 pyruvate decarboxylase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 45,724,685 45,729,020 Zm00001d052289 GRMZM2G361693 pdh1 pyruvate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF069911 Chr4 186,090,480 186,095,214 Zm00001d031659 GRMZM2G043198 pdh2 pyruvate dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF069908 Chr1 197,760,195 197,776,370 Zm00001d006107 GRMZM2G097226 pdh3 pyruvate dehydrogenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF069909 Chr2 198,318,592 198,324,907 Zm00001d021070 GRMZM2G128121 pdh4 pyruvate dehydrogenase4 from: AF069910 Chr7 142,133,051 142,138,801 Zm00001d049099 GRMZM2G091481 pdi1 protein disulfide isomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics project Oct 2013) Chr4 15,973,748 15,978,441 Zm00001d003654 GRMZM2G113629 pdi10 protein disulfide isomerase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 52,014,446 52,017,333 Zm00001d025131 GRMZM2G176443 pdi11 protein disulfide isomerase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739293 Chr10 105,800,908 105,804,404 Zm00001d006512 GRMZM2G067063 pdi12 protein disulfide isomerase12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 210,284,963 210,294,947 Zm00001d007301 GRMZM2G163421 pdi2 protein disulfide isomerase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739285 Chr2 227,279,908 227,283,960 Zm00001d054106 GRMZM2G134889 pdi3 protein disulfide isomerase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 246,775,383 246,780,965 Zm00001d014912 GRMZM2G033829 pdi4 protein disulfide isomerase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739287 Chr5 67,939,060 67,961,759 Zm00001d045218 GRMZM2G014076 pdi5 protein disulfide isomerase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 16,468,794 16,473,687 Zm00001d040766 GRMZM2G128171 pdi6 protein disulfide isomerase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739288 Chr3 64,552,842 64,556,161 Zm00001d037590 GRMZM2G159369 pdi7 protein disulfide isomerase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739289 Chr6 130,722,299 130,726,941 Zm00001d020687 GRMZM2G389173 pdi8 protein disulfide isomerase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY739290 Chr7 128,422,717 128,427,744 Zm00001d028726 GRMZM2G073628 pdi9 protein disulfide isomerase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 44,373,879 44,382,034 Zm00001d038163 GRMZM2G306345 pdk1 pyruvate, orthophosphate dikinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to genbank accession S46966 (M Schaeffer 2012) Chr6 150,024,486 150,035,717 Zm00001d010321 GRMZM2G097457 pdk2 pyruvate, orthophosphate dikinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence S46967 (M Schaeffer 2012)) Chr8 109,459,050 109,469,711 Zm00001d042676 GRMZM2G097821 pdk3 phosphoinositide dependent protein kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zaidi et al., 2015 Chr3 176,508,463 176,513,579 Zm00001d022274 AC217975.3_FG001 pdk4 pyruvate, orthophosphate dikinase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 174,141,065 174,144,404 Zm00001d029285 GRMZM2G107196 pdlk1 pyruvate dehydrogenase (lipoamide) kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 64,841,576 64,846,984 Zm00001d027607 GRMZM2G066860 pdlp1 plasmodesmatal located protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (Oct 20130 Chr1 8,919,684 8,921,767 Zm00001d006520 GRMZM2G131286 pdrp1 PDK regulatory protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 alignment to cDNA DQ645424.1 GI:108733638 Chr2 210,399,298 210,402,238 Zm00001d021672 GRMZM2G004880 pdrp2 PDK regulatory protein2 Chastain et al, 2017 Chr7 159,690,992 159,694,559 Zm00001d043771 GRMZM2G122296 peamt1 phosphoethanolamine N-methyltransferase1 Chr3 209,626,178 209,629,716 Zm00001d044705 GRMZM2G092008 pebp1 phosphatidylethanolamine-binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 235,432,714 235,437,168 Zm00001d040113 GRMZM2G152689 pebp10 phosphatidylethanolamine-binding protein10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 28,018,444 28,020,104 Zm00001d037439 GRMZM2G117057 pebp11 phosphatidylethanolamine-binding protein11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 125,464,175 125,465,714 Zm00001d043461 GRMZM2G103666 pebp12 phosphatidylethanolamine-binding protein12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 200,703,155 200,704,705 Zm00001d016253 GRMZM2G108016 pebp13 phosphatidylethanolamine-binding protein13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 153,523,441 153,524,604 Zm00001d008939 GRMZM2G373928 pebp14 phosphatidylethanolamine-binding protein Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 26,134,915 26,143,970 Zm00001d036242 GRMZM2G051338 pebp15 phosphatidylethanolamine-binding protein15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 79,177,907 79,179,890 Zm00001d017134 GRMZM2G127121 pebp16 phosphatidylethanolamine-binding protein16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 186,525,660 186,529,038 Zm00001d004630 GRMZM2G075215 pebp17 phosphatidylethanolamine-binding protein17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 123,641,554 123,643,401 Zm00001d006116 GRMZM2G158809 pebp18 phosphatidylethanolamine-binding protein18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 199,001,851 199,007,982 Zm00001d025737 GRMZM2G062052 pebp19 phosphatidylethanolamine-binding protein Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 127,951,568 127,954,961 Zm00001d050649 GRMZM2G156079 pebp2 phosphatidylethanolamine-binding protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 110,786,095 110,787,579 Zm00001d024023 AC214791.2_FG002 pebp20 phosphatidylethanolamine-binding protein20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 37,447,172 37,448,145 Zm00001d004010 GRMZM2G019993 pebp21 phosphatidylethanolamine-binding protein21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Alter et al., 2016 Chr2 75,418,521 75,419,477 Zm00001d021135 GRMZM2G440005 pebp24 phosphatidylethanolamine-binding protein24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 143,617,763 143,627,668 Zm00001d003226 GRMZM2G021560 pebp25 phosphatidylethanolamine-binding protein25 Gene model association inferred from similarity with B73 RefGen_v3 gene models From: EU241936 Chr2 36,779,809 36,782,444 Zm00001d046300 GRMZM2G400167 pebp26 phosphatidylethanolamine-binding protein26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 79,370,791 79,374,459 Zm00001d023420 GRMZM2G338454 pebp3 phosphatidylethanolamine-binding protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 5,099,284 5,100,559 Zm00001d003804 GRMZM2G075081 pebp4 phosphatidylethanolamine-binding protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 59,926,707 59,928,357 Zm00001d025346 AC217051.3_FG006 pebp5 phosphatidylethanolamine-binding protein Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 115,025,067 115,026,953 Zm00001d052537 GRMZM2G132880 pebp6 phosphatidylethanolamine-binding protein6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 192,553,796 192,554,988 Zm00001d038725 GRMZM2G141756 pebp7 phosphatidylethanolamine-binding protein7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 163,368,049 163,369,489 Zm00001d010752 GRMZM2G179264 pebp8 phosphatidylethanolamine-binding protein8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,880,531 126,882,389 Zm00001d008446 GRMZM2G021614 pebp9 phosphatidylethanolamine-binding protein9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 8,814,262 8,820,093 Zm00001d046170 GRMZM2G083841 pep1 phosphoenolpyruvate carboxylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 68,851,094 68,856,482 Zm00001d016166 GRMZM2G069542 pep2 phosphoenolpyruvate carboxylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT085108 Chr5 148,208,167 148,215,925 Zm00001d053453 GRMZM2G074122 pep3 phosphoenolpyruvate carboxylase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models originally from: X67471 (chr 4 hit) [and more strongly to chr5 B73 sequences assigned in Apr 2015] Chr4 232,245,967 232,253,821 Zm00001d020057 GRMZM2G473001 pep4 phosphoenolpyruvate carboxylase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 89,268,035 89,273,487 Zm00001d029674 GRMZM2G087063 pet2 photosynthetic electron transport2 Gene model association inferred from similarity with B73 RefGen_v3 gene models provided by A Barkan (2010) Chr1 82,234,517 82,237,350 Zm00001d002054 GRMZM2G177145 pet3 photosynthetic electron transport3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 5,036,500 5,039,237 GRMZM5G841015 pex1 pollen extensin-like1 Classical Gene Chr2 231,055,349 231,059,232 Zm00001d048715 GRMZM2G478929 pex2 pollen extensin-like2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 4,114,481 4,118,893 Zm00001d037278 GRMZM2G059151 pfk1 phosphofructose kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T70624 Chr6 119,172,801 119,179,266 Zm00001d032386 GRMZM2G450163 pfk2 phosphofructose kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Liu et al., 2016 Chr1 225,026,376 225,031,085 Zm00001d035925 GRMZM2G127798 pgd1 6-phosphogluconate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF061838 Chr6 60,489,299 60,491,983 Zm00001d042184 GRMZM2G145715 pgd2 6-phosphogluconate dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 155,339,409 155,340,851 Zm00001d049187 GRMZM2G440208 pgd3 phosphogluconate dehydrogenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 19,755,800 19,757,563 Zm00001d025015 GRMZM2G177077 pgd4 phosphogluconate dehydrogenase4 Chr10 99,806,303 99,812,704 Zm00001d036821 GRMZM2G094811 pgl1 exopolygalacturonase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ421831 Chr6 102,225,125 102,226,357 Zm00001d036823 GRMZM2G454608 pgl2 polygalacturonase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 102,273,075 102,274,307 Zm00001d036815 GRMZM2G160626 pgl3 polygalacturonase3 Chr6 101,854,366 101,855,598 Zm00001d036816 GRMZM2G160526 pgl7 exopolygalacturonase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 101,867,735 101,868,967 Zm00001d036822 GRMZM2G394259 pgl8 exopolygalacturonase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 102,234,771 102,236,003 GRMZM2G418644 pgl9 exopolygalacturonase9 Chr10 14,695,948 14,698,281 Zm00001d033746 GRMZM2G023289 pgm1 phosphoglucomutase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Based on homology to Genbank mRNA sequence. Chr1 272,697,870 272,704,606 Zm00001d013428 GRMZM2G109383 pgm2 phosphoglucomutase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Based on homology to Genbank mRNA sequence. Chr5 11,195,010 11,201,017 Zm00001d047307 GRMZM2G372632 pgr3 proton gradient regulation3 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr9 126,209,552 126,212,827 Zm00001d005485 GRMZM2G134955 phb1 prohibitin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 175,607,776 175,613,053 Zm00001d025619 GRMZM2G107114 phb2 prohibitin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 124,227,762 124,229,007 Zm00001d016979 GRMZM2G410710 phb3 prohibitin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 181,869,280 181,870,764 Zm00001d034795 AC217358.3_FG005 phb4 prohibitin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 302,374,919 302,378,019 Zm00001d035008 GRMZM2G039895 phd1 PHD-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 1,589,350 1,593,458 Zm00001d011158 GRMZM2G335720 phd10 PHD-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 141,169,109 141,194,917 Zm00001d013416 GRMZM2G408897 phd11 PHD-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,762,331 10,765,607 Zm00001d035487 GRMZM2G455664 phd12 PHD-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 28,937,404 28,984,699 Zm00001d049736 GRMZM2G059266 phd13 PHD-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 42,106,178 42,110,394 Zm00001d048385 GRMZM2G178072 phd14 PHD-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 155,329,232 155,336,959 Zm00001d034004 GRMZM2G173852 phd15 PHD-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 280,899,968 280,910,431 Zm00001d037086 GRMZM2G168249 phd16 PHD-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 111,753,580 111,762,127 Zm00001d010974 GRMZM2G155123 phd17 PHD-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,530,020 135,542,207 Zm00001d023356 GRMZM2G443565 phd18 PHD-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,054,205 4,057,138 Zm00001d018912 GRMZM2G412492 phd19 PHD-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,117,216 9,136,917 Zm00001d032263 GRMZM2G119357 phd2 PHD-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 219,629,525 219,630,314 GRMZM5G843893 phd20 PHD-transcription factor 20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,903,989 1,908,431 Zm00001d045629 GRMZM2G156129 phd21 PHD-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 29,279,184 29,282,692 Zm00001d017862 GRMZM2G045544 phd22 PHD-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,091,060 209,095,479 Zm00001d035933 GRMZM2G103230 phd23 PHD-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 61,046,505 61,053,692 Zm00001d022583 GRMZM2G434715 phd24 PHD-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 180,328,539 180,337,389 Zm00001d013278 GRMZM2G087482 phd25 PHD-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,698,694 7,714,914 Zm00001d021541 GRMZM2G316191 phd26 PHD-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 155,404,186 155,420,422 Zm00001d045755 GRMZM2G071613 phd27 PHD-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 37,242,832 37,245,915 Zm00001d048969 GRMZM2G068331 phd28 PHD-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 11,098,504 11,103,144 Zm00001d014900 GRMZM2G466270 phd29 PHD-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 67,332,284 67,363,587 Zm00001d019039 GRMZM2G097726 phd3 PHD-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 13,826,135 13,833,785 Zm00001d020361 GRMZM2G091265 phd30 PHD-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 109,153,947 109,156,282 Zm00001d006428 GRMZM2G181158 phd31 PHD-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 207,695,606 207,743,821 Zm00001d035862 GRMZM2G134214 phd32 PHD-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 57,387,932 57,398,301 Zm00001d050330 GRMZM5G871463 phd33 PHD-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 81,873,702 81,879,578 Zm00001d039579 GRMZM2G158194 phd34 PHD-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 8,262,683 8,264,981 Zm00001d034006 GRMZM5G813111 phd35 PHD-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,031,812 281,037,527 Zm00001d047676 GRMZM5G889372 phd36 PHD-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 139,044,389 139,053,878 Zm00001d036673 GRMZM2G473258 phd38 PHD-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 97,232,627 97,243,366 Zm00001d053697 GRMZM2G385338 phd39 PHD-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,382,347 239,406,395 Zm00001d023914 GRMZM2G365888 phd4 PHD-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 27,979,618 27,987,242 Zm00001d041708 GRMZM2G081350 phd40 PHD-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 134,378,935 134,385,716 Zm00001d011802 GRMZM2G149587 phd42 PHD-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 161,757,825 161,764,087 Zm00001d042613 GRMZM2G025703 phd43 PHD-transcription factor 43 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 173,685,114 173,686,104 Zm00001d053989 GRMZM2G391413 phd5 PHD-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 244,755,447 244,765,434 Zm00001d028863 GRMZM2G022945 phd6 PHD-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,930,452 48,937,928 Zm00001d026698 GRMZM2G038050 phd8 PHD-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 150,307,587 150,319,013 Zm00001d026270 GRMZM2G073581 phd9 PHD-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,437,417 142,472,462 Zm00001d032605 GRMZM2G346455 phi002 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 231,856,279 231,868,220 Zm00001d034782 GRMZM5G883969 phi064 Chr1 302,188,639 302,191,274 GRMZM2G448739 phi069 Chr7 170,582,456 170,583,944 Zm00001d034256 GRMZM2G065083 phi1 phosphohexose isomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U17225 Chr1 288,168,990 288,176,921 Zm00001d010171 GRMZM2G026470 phi100175 Chr8 102,865,067 102,866,878 Zm00001d007936 GRMZM5G850015 phi101049 Chr2 243,421,943 243,422,896 Zm00001d014872 GRMZM2G040871 phi109188a Chr5 66,605,228 66,608,036 Zm00001d022569 GRMZM2G056772 phi116 Chr7 180,129,805 180,131,184 Zm00001d010287 GRMZM2G136567 phi121 Chr8 107,618,947 107,621,285 Zm00001d012708 GRMZM2G040970 phi233376 Chr8 179,043,085 179,046,513 Zm00001d039786 phi243966 Chr3 14,617,725 14,618,667 Zm00001d006340 GRMZM2G037875 phi251315 Chr2 205,015,688 205,019,006 Zm00001d034370 phi265454 Chr1 291,065,525 291,075,328 Zm00001d034085 GRMZM2G008072 phi308707 Chr1 283,651,338 283,654,633 Zm00001d022044 GRMZM2G356076 phi328175 Chr7 168,544,322 168,548,259 Zm00001d016823 phi333597 Chr5 177,286,413 177,287,057 Zm00001d006821 GRMZM2G321404 phi435417 Chr2 217,263,983 217,264,651 Zm00001d048176 GRMZM2G078441 phi448880 Chr9 151,547,408 151,550,218 Zm00001d001915 GRMZM2G043932 phi96100 Chr2 2,812,723 2,813,940 Zm00001d010842 GRMZM2G380515 phm10525 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 129,920,062 129,926,481 Zm00001d004472 GRMZM2G069773 phm13360 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 114,012,780 114,016,467 Zm00001d040360 GRMZM2G022088 phm13823 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 39,908,343 39,913,413 Zm00001d011786 GRMZM2G067601 phm15278 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 161,548,685 161,550,315 Zm00001d051387 GRMZM2G098800 phm1558 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 156,767,880 156,770,006 Zm00001d040446 GRMZM2G003883 phm15899 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 43,701,925 43,707,461 Zm00001d042962 GRMZM2G096470 phm1675 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 184,999,153 185,011,550 Zm00001d042582 GRMZM2G080917 phm1959 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 172,730,778 172,735,201 Zm00001d045635 GRMZM2G472428 phm229 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 30,190,972 30,217,757 Zm00001d040109 GRMZM2G076104 phm2343 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 27,953,105 27,954,241 Zm00001d028098 GRMZM2G119104 phm3226 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 22,960,075 22,971,879 Zm00001d044184 GRMZM2G041015 phm3342 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 221,301,455 221,304,723 Zm00001d003878 GRMZM2G023020 phm3457 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 64,526,539 64,530,682 Zm00001d025433 GRMZM2G072337 phm4341 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 118,612,121 118,615,983 Zm00001d019472 GRMZM2G092129 phm4353 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 35,446,294 35,461,015 Zm00001d004410 GRMZM2G325762 phm4880 Chr2 110,216,975 110,222,616 Zm00001d017545 GRMZM2G112247 phm532 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 199,141,404 199,144,529 Zm00001d002345 GRMZM2G345667 phm5822 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,635,912 10,638,275 Zm00001d012850 GRMZM2G313481 phm662 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 1,084,640 1,087,652 Zm00001d046971 GRMZM2G110408 phm8909 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 113,591,821 113,595,110 Zm00001d008549 GRMZM2G156713 phm9695 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 12,681,028 12,684,611 Zm00001d034074 GRMZM2G074158 pho1 starch phosphorylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 283,220,928 283,230,016 Zm00001d042842 GRMZM2G085577 pho2 starch phoshorylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 181,808,569 181,820,628 Zm00001d040125 GRMZM5G891944 phos1 phosphate transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Salazar-Vidal et al., 2016 Chr3 28,534,287 28,540,068 Zm00001d051945 GRMZM2G466545 phos2 phosphate transporter2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Salazar-Vidal et al., 2016 Chr4 174,987,519 174,992,037 Zm00001d018445 GRMZM5G872499 phos3 phosphate transporter3 Gene model association inferred from similarity with B73 RefGen_v3 gene models and confirmed by Salazar 2017 part of phos3 gene Chr5 220,941,468 220,946,307 Zm00001d037468 GRMZM2G064657 phos4 phosphate transporter4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Salazar-Vidal et al., 2016 Chr6 126,299,307 126,303,725 Zm00001d044599 GRMZM2G001457 phot1 blue-light receptor phototropin 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 233,046,742 233,055,445 Zm00001d032353 GRMZM2G032351 phot2 blue-light receptor phototropin 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU955535 Chr1 223,545,282 223,577,431 Zm00001d023839 GRMZM2G571844 php06005 Chr10 23,898,579 23,909,591 Zm00001d003781 GRMZM5G807267 php10012 Chr2 59,180,386 59,182,787 Zm00001d043069 php10016c Chr3 188,280,572 188,282,595 Zm00001d022578 GRMZM2G134480 php20020 Chr7 180,302,830 180,308,365 Zm00001d052519 GRMZM2G051697 php20071 Chr4 191,968,167 191,972,580 Zm00001d023290 GRMZM2G172596 php20075a(gast) Chr10 2,230,214 2,231,452 Zm00001d041298 GRMZM2G456669 php20511 Chr3 110,788,361 110,796,970 Zm00001d035657 GRMZM2G069162 php20528 Chr6 39,658,985 39,661,441 Zm00001d017646 GRMZM5G874697 php20531 Chr5 202,983,357 202,984,353 Zm00001d027504 GRMZM2G089056 php20537b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,907,596 6,912,220 Zm00001d018806 php20581a(tb) Chr7 5,742,596 5,743,909 Zm00001d016269 GRMZM5G896708 php20589 low confidence Chr5 154,978,450 154,979,067 Zm00001d027590 GRMZM2G172751 php20603 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,573,955 8,577,898 Zm00001d053828 GRMZM2G101818 php20608a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 241,949,508 241,950,525 Zm00001d023277 GRMZM2G151903 php20626 Chr10 2,014,035 2,017,856 Zm00001d027904 GRMZM2G445602 php20640 Chr1 17,186,476 17,190,166 Zm00001d024237 GRMZM2G147683 php20646 Chr10 58,676,785 58,678,869 Zm00001d031338 php20654 possible overlap with AY110296 Chr1 186,729,080 186,739,316 Zm00001d031346 GRMZM2G438824 php20682 Chr1 187,013,825 187,014,620 Zm00001d025833 GRMZM2G139797 php20719a Jia et al., 2016 Chr10 131,304,078 131,306,002 Zm00001d048804 GRMZM2G076435 php20725a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 5,796,759 5,799,180 Zm00001d012504 GRMZM2G166441 php20793 Chr8 175,572,544 175,576,928 Zm00001d036175 GRMZM2G152777 php20854 Chr6 75,713,940 75,715,842 Zm00001d022305 GRMZM2G015703 php20909b Chr7 174,827,718 174,833,760 Zm00001d051848 GRMZM2G080497 phpt1 para-hydroxybenzoate-polyprenyltransferase1 Chr4 172,178,900 172,182,412 Zm00001d045993 GRMZM2G100103 phs1 poor homologous synapsis1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT041980 Chr9 53,061,463 53,078,264 Zm00001d014116 GRMZM2G326707 pht1 phosphate transporter protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY639019 Chr5 33,004,668 33,006,371 Zm00001d027549 GRMZM2G075870 pht10 phosphate transporter protein10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,053,530 8,055,161 Zm00001d019480 GRMZM2G139639 pht11 phosphate transporter protein11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 36,223,764 36,225,377 Zm00001d004308 GRMZM2G009800 pht12 phosphate transporter protein12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 102,151,298 102,152,936 Zm00001d004305 GRMZM2G170208 pht13 phosphate transporter protein13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 102,029,424 102,031,072 Zm00001d032850 GRMZM2G154090 pht2 phosphate transporter protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY974041 Chr1 240,236,142 240,237,767 Zm00001d004301 GRMZM2G045473 pht3 phosphate transporter protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY639021 Chr2 101,598,637 101,600,244 Zm00001d025028 GRMZM2G159075 pht4 phosphate transporter protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY639022 Chr10 100,507,387 100,508,961 GRMZM2G041595 pht5 phosphate transporter protein5 Chr7 172,022,758 172,024,519 Zm00001d011498 GRMZM5G881088 pht6 phosphate transporter protein6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY974046 Chr8 152,525,890 152,527,647 Zm00001d031875 GRMZM2G112377 pht7 phosphate transporter protein7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY974043 Chr1 205,091,435 205,093,066 Zm00001d004306 GRMZM2G009779 pht8 phosphate transporter protein8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 102,108,333 102,109,875 Zm00001d027700 GRMZM2G070087 pht9 phosphate transporter protein9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 11,409,287 11,410,861 Zm00001d033799 GRMZM2G157727 phyA1 phytochromeA1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 274,078,397 274,085,766 Zm00001d013402 GRMZM2G181028 phyA2 phytochromeA2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY260865 Chr5 10,472,063 10,479,079 Zm00001d028905 GRMZM2G124532 phyB1 phytochromeB1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 50,443,216 50,455,013 Zm00001d047632 GRMZM2G092174 phyB2 phytochromeB2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 137,491,058 137,497,818 Zm00001d034038 GRMZM2G057935 phyC1 phytochromeC1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 281,978,994 281,984,348 Zm00001d013262 GRMZM2G129889 phyC2 phytochromeC2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 7,372,367 7,382,139 Zm00001d041660 GRMZM2G140101 phys1 phytase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U75531 Chr3 132,281,342 132,282,505 Zm00001d041670 GRMZM2G043336 phys2 phytase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ223471 Chr3 132,769,221 132,770,390 Zm00001d008205 GRMZM2G387528 pif3 phytochrome interacting factor3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from primers in Gao et al 2015; also assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,077,606 1,080,652 Zm00001d047117 AC234161.1_FG001 piip1 physical impedance induced protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 119,248,408 119,248,797 Zm00001d014794 GRMZM2G300135 piip2 physical impedance induced protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF001635 Chr5 63,460,671 63,464,068 Zm00001d050219 GRMZM2G103721 pik1 phosphatidylinositol 3-kinase1 Chr4 74,335,082 74,344,859 GRMZM2G086179 pilncr1 pi-deficiency-induced long non-coding RNA1 low confidence; aligns to EU942566 Chr1 10,434,486 10,435,027 Zm00001d044812 GRMZM2G098643 pin1 PIN-formed protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From Forestan et al 2012 Chr9 3,291,763 3,295,059 Zm00001d044083 GRMZM2G126260 pin10 PIN-formed protein10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr3 218,523,216 218,528,077 Zm00001d006082 GRMZM2G040911 pin11 PIN-formed protein11 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr2 197,602,488 197,606,112 Zm00001d045219 GRMZM2G160496 pin12 PIN-formed protein12 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr9 16,477,975 16,480,410 Zm00001d043083 GRMZM2G050089 pin14 PIN-formed protein14 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr3 188,687,080 188,692,074 GRMZM2G403601 pin15 PIN-formed protein15 Li et al, 2017 Chr3 20,120,984 20,121,889 Zm00001d018024 GRMZM2G074267 pin2 PIN-formed protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr5 212,254,262 212,257,744 Zm00001d052269 GRMZM2G149184 pin3 PIN-formed protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence EU570251; see also Forestan et al 2012 Chr4 185,371,637 185,375,098 Zm00001d052442 GRMZM2G171702 pin4 PIN-formed protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr4 190,119,181 190,122,383 Zm00001d042345 GRMZM2G025742 pin5 PIN-formed protein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr3 162,347,553 162,351,683 Zm00001d031594 GRMZM2G148648 pin7 PIN-formed protein7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr1 195,810,416 195,812,223 Zm00001d043660 GRMZM5G839411 pin8 PIN-formed protein8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr3 206,187,330 206,189,862 Zm00001d043179 GRMZM5G859099 pin9 PIN-formed protein9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Forestan et al 2012 Chr3 190,701,685 190,704,770 Zm00001d002690 GRMZM2G174807 pip1a plasma membrane intrinsic protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X82633 (chr 2 hit) Chr2 19,342,470 19,344,477 Zm00001d017526 AC209208.3_FG002 pip1b plasma membrane intrinsic protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 198,707,054 198,710,453 Zm00001d051403 GRMZM2G392975 pip1d plasma membrane intrinsic protein1 from: Entrez Gene 541886 Chr4 157,200,400 157,203,987 Zm00001d051872 GRMZM2G081843 pip1e plasma membrane intrinsic protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 172,964,877 172,966,249 Zm00001d003006 GRMZM2G178693 pip2a plasma membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 29,275,928 29,278,172 Zm00001d005421 GRMZM2G092125 pip2b plasma membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 173,378,742 173,382,478 Zm00001d051174 GRMZM2G081192 pip2c plasma membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 147,173,978 147,176,860 Zm00001d017288 GRMZM2G154628 pip2d plasma membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 191,817,119 191,819,914 Zm00001d019563 GRMZM2G014914 pip2e plasma membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 42,951,695 42,954,861 Zm00001d019565 GRMZM2G047368 pip2f plasma membrane intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 43,071,903 43,073,370 Zm00001d045208 GRMZM2G440198 pipf1 Ping-Pong family plant transposase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yang et al., 2017 Chr9 16,083,372 16,084,520 Zm00001d021737 GRMZM2G309025 pk3 S-domain class receptor-like kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 161,870,516 161,872,996 Zm00001d043389 GRMZM2G014833 pk4 protein kinase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 198,491,982 198,495,758 Zm00001d028963 GRMZM2G018728 pki1 protein kinase inhibitor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 53,142,425 53,144,911 Zm00001d002246 GRMZM2G091302 pks1 polyketide synthesis homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU967359 Chr2 8,903,282 8,911,060 Zm00001d037118 GRMZM2G701063 pl1 purple plant1 Classical Gene Chr6 112,978,409 112,979,673 Zm00001d028594 GRMZM2G408887 platz1 PLATZ-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,221,978 40,223,031 Zm00001d015868 GRMZM2G323553 platz10 PLATZ-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 127,438,923 127,439,977 Zm00001d017682 GRMZM2G004548 platz11 PLATZ-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,120,837 204,122,561 Zm00001d047025 GRMZM2G093270 platz13 PLATZ-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,708,968 115,711,076 Zm00001d047250 GRMZM2G077495 platz14 PLATZ-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 124,047,961 124,049,024 Zm00001d026047 GRMZM2G086403 platz15 PLATZ-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 136,891,564 136,893,726 Zm00001d046688 platz16 PLATZ-transcription factor 16 Chr9 102,440,771 102,445,873 Zm00001d046958 platz17 PLATZ-transcription factor 17 Chr9 113,035,703 113,040,261 Zm00001d029437 GRMZM2G311656 platz2 PLATZ-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 70,442,356 70,448,204 Zm00001d030032 GRMZM2G094168 platz3 PLATZ-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 101,087,719 101,089,690 Zm00001d031925 GRMZM2G171934 platz4 PLATZ-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 206,932,526 206,934,498 Zm00001d002489 GRMZM2G131280 platz5 PLATZ-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,850,163 13,852,195 Zm00001d051376 GRMZM2G342691 platz6 PLATZ-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 156,414,146 156,415,564 Zm00001d051511 GRMZM2G091044 platz7 PLATZ-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,984,327 160,986,154 Zm00001d015394 GRMZM2G017882 platz8 PLATZ-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 88,146,164 88,150,303 Zm00001d015560 GRMZM2G070295 platz9 PLATZ-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 97,682,870 97,684,322 Zm00001d014903 GRMZM5G889467 plc1 phospholipase C1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 67,438,945 67,442,847 Zm00001d039670 GRMZM2G054559 pld1 phospholipase D1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: D73410 Chr3 11,500,060 11,504,969 Zm00001d006257 GRMZM2G108912 pld10 phospholipase D10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr2 202,910,034 202,917,109 Zm00001d022594 GRMZM2G140811 pld11 phospholipase D11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr7 180,721,223 180,728,877 Zm00001d005484 GRMZM2G145944 pld12 phospholipase D12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr2 175,599,089 175,605,258 Zm00001d037946 GRMZM2G066485 pld13 phospholipase D13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr6 143,056,934 143,084,269 Zm00001d009075 GRMZM2G158008 pld14 phospholipase D14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 34,795,467 34,807,548 Zm00001d027386 GRMZM2G312438 pld15 phospholipase D15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,121,780 4,126,391 Zm00001d009075 GRMZM2G343588 pld16 phospholipase D16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 34,795,467 34,807,548 Zm00001d015033 GRMZM5G865943 pld17 phospholipase D17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 72,855,538 72,858,777 Zm00001d008727 GRMZM2G061969 pld2 phospholipase D2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr8 17,939,385 17,943,956 Zm00001d037643 GRMZM2G438378 pld3 phospholipase D3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr6 132,724,336 132,727,573 Zm00001d037643 GRMZM2G043340 pld4 phospholipase D4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr6 132,724,336 132,727,573 Zm00001d046508 GRMZM2G442551 pld5 phospholipase D5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr9 93,066,048 93,070,157 Zm00001d046508 GRMZM2G019029 pld6 phospholipase D6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr9 93,066,048 93,070,157 Zm00001d029397 GRMZM2G179792 pld7 phospholipase D7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr1 68,934,359 68,938,239 Zm00001d005770 GRMZM2G159125 pld8 phospholipase D8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr2 187,674,233 187,678,098 Zm00001d029684 GRMZM2G133943 pld9 phospholipase D9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chen et al., 2016 Chr1 82,569,590 82,575,849 Zm00001d035859 GRMZM2G071450 ploc1 plastocyanin homolog1 Chr6 56,821,519 56,821,986 GRMZM2G078409 ploc2 plastocyanin2 from sequence EU955234 Chr2 24,166,809 24,167,435 Zm00001d007638 GRMZM2G037104 pls1 phospholipid synthesis1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Z29518 Chr2 236,708,454 236,714,123 Zm00001d048766 GRMZM5G878139 pls2 phospholipid synthesis2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AI622087 Chr4 5,217,092 5,228,295 Zm00001d023343 GRMZM2G101958 plt1 phospholipid transfer protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene (from: J04176) Chr10 3,824,749 3,825,745 Zm00001d044686 GRMZM2G010868 plt2 phospholipid transfer protein homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 234,930,037 234,930,396 Zm00001d043049 GRMZM2G126397 plt3 phospholipid transfer protein homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 187,419,504 187,420,504 Zm00001d028973 GRMZM2G174680 plt4 phospholipid transfer protein homolog4 Chr1 53,309,064 53,309,600 Zm00001d034415 GRMZM2G005991 plt5 phospholipid transfer protein homolog5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,331,208 292,332,482 Zm00001d014758 GRMZM2G116167 plt6 phospholipid transfer protein homolog6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 61,807,671 61,809,017 Zm00001d025588 GRMZM2G125356 pme1 pectin methylesterase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 123,299,914 123,302,351 Zm00001d045048 GRMZM2G046618 pme2 pectin methylesterase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Hawkins et al., 2014 Chr9 11,038,810 11,041,663 Zm00001d012518 GRMZM5G833389 pmg1 phosphoglycerate mutase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 176,004,430 176,009,389 Zm00001d028446 GRMZM2G019260 pmk1 Phosphomevalonate kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 35,242,367 35,253,005 Zm00001d027366 GRMZM2G029824 pmp1 peroxisomal membrane protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (Oct 2013) Chr1 3,805,137 3,807,525 Zm00001d006329 GRMZM2G153369 pmpm2 proteolipid membrane potential regulator2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to sequence in Fu et al (2012), and to accession EU959002 Chr2 204,888,454 204,889,753 Zm00001d045096 GRMZM2G079306 pmpm3 proteolipid membrane potential regulator3 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to cDNA EU962407 and to sequence file [Fu et al 2012) Chr9 12,384,425 12,385,209 Zm00001d028718 GRMZM2G179462 pmpm4 proteolipid membrane potential regulator4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to sequence file in Fu et al 2012, and to EU954642 Chr1 44,179,372 44,180,241 Zm00001d022264 GRMZM2G477325 pmpm5 proteolipid membrane potential regulator5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to sequence in Fu et al (2012), and to sequence accession EU975274 Chr7 173,953,537 173,954,457 Zm00001d008200 GRMZM2G099984 pmpm7 proteolipid membrane potential regulator7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence in Fu et al (2012), and aligment to sequence accession EU955642 Chr8 985,128 985,854 Zm00001d040544 GRMZM2G066870 pmpm8 proteolipid membrane potential regulator8 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence in Fu et al 2012, and to sequence accession EU971491 Chr3 48,922,461 48,923,574 Zm00001d024423 GRMZM2G023422 pol1 DNA polymerase like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Udy et al, 2012 Chr10 70,399,874 70,412,898 Zm00001d027299 GRMZM2G114459 polm1 polymerase II transcription-mediator1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,157,230 2,170,332 Zm00001d048541 GRMZM5G844080 polm2 polymerase II transcription-mediator2 Chr9 158,173,924 158,186,211 Zm00001d045603 GRMZM2G153792 polm3 polymerase II transcription-mediator3 not in current annotation release Chr9 28,436,212 28,457,275 Zm00001d032430 GRMZM2G078154 pop1 putative organelle permease1 Chr1 226,164,158 226,177,345 Zm00001d011242 GRMZM2G155021 por1 porin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X73429 Chr8 144,285,793 144,288,703 Zm00001d026177 GRMZM2G125023 por2 porin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF326503 Chr10 140,377,176 140,378,531 Zm00001d040702 GRMZM2G104394 pox1 guaiacol peroxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v3 alignment sequence AJ401274 Chr3 59,064,582 59,072,226 Zm00001d029274 GRMZM2G040638 pox2 guaiacol peroxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_V3 reference genome alignment to sequence AJ401275.1 (MLS 2015) Chr1 64,514,340 64,515,829 Zm00001d037547 GRMZM2G135108 pox3 guaiacol peroxidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of B73_V3 to sequence AJ401276.1 (MLS 20150) Chr6 128,952,506 128,954,001 Zm00001d018429 GRMZM2G178074 ppck1 phosphoenolpyruvate carboxylase kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 aligment to sequence AY911413 Chr5 220,588,216 220,589,696 Zm00001d051156 GRMZM2G135091 ppck2 phosphoenolpyruvate carboxylase kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to sequence AY911414 Chr4 146,401,256 146,402,641 Zm00001d017270 GRMZM2G096753 ppck3 phosphoenolpyruvate carboxylase kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to AY911415 Chr5 191,243,684 191,245,128 Zm00001d003068 GRMZM2G049541 ppck4 phosphoenolpyruvate carboxylase kinase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_V2 alignment to AY911416 Chr2 31,084,436 31,085,836 Zm00001d030638 GRMZM6G924006 ppd1 photo-system b P domain-containing protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 150,127,232 150,129,938 Zm00001d016660 GRMZM2G326111 ppi1 peptidyl-prolyl isomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT042680 Chr5 171,710,734 171,711,252 Zm00001d000001 GRMZM5G851266 ppo1 polyphenol oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg150 48,820 51,164 Zm00001d018197 GRMZM6G300210 ppp1 pyrophosphate-energized proton pump1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,311,489 216,316,556 Zm00001d047149 GRMZM2G428579 ppr100 pentatricopeptide repeat100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 120,108,014 120,109,480 Zm00001d043529 GRMZM2G012174 ppr102 pentatricopeptide repeat102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 202,956,954 202,962,267 Zm00001d007838 GRMZM2G170896 ppr103 pentatricopeptide repeat-containing protein103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Hammani et al., 2016 Chr2 240,577,564 240,580,182 Zm00001d013081 GRMZM2G099604 ppr13 pentatricopeptide repeat13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 4,445,501 4,447,321 Zm00001d043778 GRMZM2G050697 ppr152 pentatricopeptide repeat protein152 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 Chr3 209,949,057 209,951,249 Zm00001d018693 GRMZM2G341621 ppr2 pentatricopeptide repeat 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to cDNA EU956685 |gi| 195613945 (July 2011) Chr7 2,686,485 2,689,002 Zm00001d045089 AC215198.3_FG002 ppr2263 pentatricopeptide repeat protein2263 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Sosso et al 2012 Chr9 12,194,663 12,197,108 Zm00001d037036 GRMZM2G129783 ppr346 pentatricopeptide repeat protein346 Chr6 109,841,574 109,844,183 Zm00001d049122 GRMZM2G333678 ppr36 pentatricopeptide repeat36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 16,740,511 16,742,220 Zm00001d026654 ppr4 pentatricopeptide repeat 4 no good match in v3; excellent hit in v4 Chr10 149,493,855 149,501,735 Zm00001d052240 GRMZM2G025409 ppr5 pentatricopeptide repeat 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of B73_v2 to cDNA EU037901 | GI:154520280 (July 2011) Chr4 184,369,041 184,371,794 Zm00001d051864 GRMZM2G337701 ppr521 pentatricopeptide repeat521 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wei & Han, 2016 Chr4 172,708,058 172,720,334 Zm00001d034892 GRMZM2G438524 ppr53 pentatricopeptide repeat53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zoschke et al., 2015 Chr1 304,951,395 304,953,545 Zm00001d024248 GRMZM2G005938 ppr*-59040 pentatricopeptide repeat*-59040 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 59,441,463 59,446,450 Zm00001d045550 GRMZM2G093291 ppr6 pentatricopeptide repeat6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 26,527,595 26,531,578 Zm00001d017931 GRMZM2G341479 ppr61 pentatricopeptide repeat61 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 210,262,377 210,263,936 Zm00001d034428 GRMZM2G070381 ppr78 pentatricopeptide repeat78 Chr1 292,776,051 292,778,219 Zm00001d031217 GRMZM2G475897 ppr*-GRMZM2G475897 pentatricopeptide repeat*-GRMZM2G475897 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 182,484,848 182,492,517 Zm00001d015030 GRMZM2G164202 pprsmr4 pentatricopeptide repeat smr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 72,784,523 72,786,344 Zm00001d005542 GRMZM2G047404 ppt1 plastid phosphate/phosphoenolpyruvate translocator1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U66403 Chr2 178,096,528 178,100,358 Zm00001d020004 GRMZM2G103047 ppt2 plastid phosphate/phosphoenolpyruvate translocator2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U66404 Chr7 85,031,197 85,035,323 Zm00001d017077 GRMZM2G025832 pr1 red aleurone1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to GenBank locus HQ699781 Chr5 184,494,219 184,496,209 Zm00001d036319 GRMZM2G120047 prc1 proteasome component1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 84,001,793 84,002,545 Zm00001d013505 GRMZM2G111566 prc2 proteasome component2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from homology to Genbank sequence EU952592 Chr5 12,944,261 12,947,289 Zm00001d027593 GRMZM2G472167 prc3 proteasome component3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from homology to Genbank sequence EU957210 Chr1 8,596,506 8,599,611 Zm00001d015788 GRMZM2G171604 prc4 proteasome component4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from homology to Genbank sequence AY109445 Chr5 119,713,521 119,721,731 Zm00001d024027 GRMZM2G049915 prcw1 proline rich cell wall protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from homology to Genbank sequence EU941682 Chr10 37,879,487 37,880,623 Zm00001d049152 GRMZM2G079452 prda1 pep-related development arrested1 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr4 17,892,779 17,899,598 Zm00001d018145 GRMZM2G072861 prep2 presequence protease2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,496,060 215,504,192 Zm00001d038783 GRMZM2G074361 prf1 profilin homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 164,327,814 164,329,029 Zm00001d010797 GRMZM2G109842 prf2 profilin homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542410 Chr8 128,115,856 128,116,962 Zm00001d012773 GRMZM5G876285 prf3 Profilin homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU960514 Chr8 180,621,908 180,623,041 Zm00001d045323 GRMZM5G877388 prf5 Profilin homolog5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542625 Chr9 18,935,792 18,946,869 Zm00001d051898 GRMZM2G112240 prh1 ser/thr protein phosphatase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 173,925,846 173,928,349 Zm00001d004357 GRMZM2G019819 prh10 protein phosphatase homolog10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr2 105,975,690 105,979,822 Zm00001d025055 GRMZM2G159811 prh11 protein phosphatase homolog11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr10 101,885,723 101,890,901 Zm00001d038846 GRMZM2G177386 prh12 protein phosphatase homolog12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 165,730,468 165,734,191 Zm00001d044301 GRMZM2G134628 prh13 protein phosphatase homolog13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr3 224,583,950 224,589,560 Zm00001d039163 GRMZM2G102255 prh14 protein phosphatase homolog14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr6 171,547,967 171,551,165 Zm00001d009747 GRMZM2G383807 prh15 protein phosphatase homolog15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr8 79,418,294 79,421,379 Zm00001d001988 GRMZM2G056572 prh16 putative protein phosphatase 2C 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,000,536 4,005,122 Zm00001d036031 GRMZM2G164352 prh17 protein phosphatase homolog17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al., 2017 Chr6 67,349,219 67,356,033 Zm00001d011132 GRMZM2G437575 prh18 protein phosphatase homolog18 Chr8 140,008,931 140,009,959 Zm00001d011131 GRMZM2G001243 prh19 protein phosphatase homolog19 Chr8 139,985,928 139,987,215 Zm00001d022202 GRMZM2G140288 prh2 protein phosphatase homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to genbank sequence BT068007 Chr7 172,755,383 172,761,407 Zm00001d011495 GRMZM2G300125 prh20 protein phosphatase homolog20 Chr8 152,339,070 152,343,283 Zm00001d042886 GRMZM2G059453 prh3 protein phosphatase homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr3 182,899,703 182,901,648 Zm00001d012401 GRMZM2G166297 prh4 protein phosphatase homolog4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr8 173,733,501 173,735,518 GRMZM2G010855 prh5 protein phosphatase homolog5 Xiang, YL et al. 2016 Chr1 39,144,013 39,146,119 Zm00001d020100 GRMZM2G308615 prh6 protein phosphatase homolog6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr7 92,004,425 92,005,501 Zm00001d005609 GRMZM2G082487 prh7 protein phosphatase homolog7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr2 180,648,852 180,649,904 Zm00001d044015 GRMZM2G122228 prh8 protein phosphatase homolog8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr3 216,531,011 216,536,924 Zm00001d009626 GRMZM5G818101 prh9 protein phosphatase homolog9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xiang, YL et al. 2016 Chr8 73,804,434 73,806,809 Zm00001d005694 GRMZM2G119906 prin2 plastid redox insensitive2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Williams-Carrier et al. 2014 Chr2 183,651,912 183,653,332 Zm00001d017711 GRMZM2G162529 prk1 phosphoribulokinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (Oct 2013) Chr5 204,910,256 204,912,526 Zm00001d018535 GRMZM2G133919 prl1 protease PrlC candidate1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 222,621,124 222,631,121 Zm00001d040652 GRMZM2G409309 prm5 powdery mildew resistant protein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Olukolu, BA et al. 2016 Chr3 56,429,593 56,438,793 Zm00001d010056 GRMZM2G375504 pro1 proline responding1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Wang et al., 2014 Chr8 97,510,673 97,521,556 Zm00001d002137 GRMZM5G899080 propep1 precursor elicitor peptide1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 model provided by A Huffaker Chr2 6,508,338 6,509,353 Zm00001d002138 GRMZM2G339117 propep3 precursor elicitor peptide3 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 gene model provided by A Huffaker 5/2013 Chr2 6,519,765 6,520,292 Zm00001d024458 GRMZM2G141133 propep4 precursor elicitor peptide4 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 gene model provided by A Huffaker 5/2013 Chr10 71,754,227 71,754,826 Zm00001d024460 GRMZM2G141071 propep5 precursor elicitor peptide5 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 gene model provided by A Huffaker 5/2013 Chr10 71,764,322 71,764,927 Zm00001d009296 AC205274.3_FG001 prp1 pathogenesis-related protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 52,923,857 52,924,360 Zm00001d003379 GRMZM2G102356 prp2 pathogenesis-related protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 42,234,465 42,235,544 Zm00001d048947 GRMZM2G117989 prp3 pathogenesis-related protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X82184 Chr4 10,513,764 10,514,291 Zm00001d018738 GRMZM2G465226 prp4 pathogenesis related protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U82200 Chr7 3,653,618 3,654,109 Zm00001d031158 GRMZM2G402631 prp5 pathogenesis related protein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Christensen et al., 2015 Chr1 179,966,643 179,967,167 Zm00001d028816 GRMZM2G112488 prp6 pathogenesis-related protein6 Chr1 47,445,913 47,446,888 Zm00001d028815 GRMZM2G112524 prp7 pathogenesis-related protein7 Chr1 47,440,048 47,441,026 Zm00001d008203 GRMZM2G039396 prpo1 protoporphyrinogen IX oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AF218052 alignment to B73_V3 Chr8 1,019,559 1,026,656 Zm00001d003214 GRMZM2G364901 prpo2 protoporphyrinogen IX oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AF273767 alignment to B73_V2 Chr2 36,238,478 36,251,590 Zm00001d017787 GRMZM2G320307 prr1 putidaredoxin reductase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,752,152 206,757,266 Zm00001d024119 GRMZM2G033985 prx112 peroxidase112 Chr10 46,971,393 46,973,252 Zm00001d024753 GRMZM2G177792 prx35 peroxidase35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Lopez-Castillo et al., 2015 Chr10 86,312,505 86,313,524 Zm00001d014467 GRMZM2G085967 prx39 peroxidase39 Chr5 49,119,308 49,122,774 Zm00001d017696 GRMZM2G076562 prx64 peroxidase64 Chr5 204,473,993 204,475,006 Zm00001d015651 GRMZM5G849107 ps1 pink scutellum1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 103,229,657 103,231,129 Zm00001d036521 GRMZM2G100976 psa1 photosystemI1 Chr6 91,157,618 91,158,864 Zm00001d031738 GRMZM2G021687 psa2 photosystemI2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Fristedt et al., 2014 Chr1 200,303,755 200,305,654 Zm00001d013295 GRMZM2G051403 psa3 photosystemI3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Shen et al., 2017 Chr5 7,990,163 7,991,833 Zm00001d018797 GRMZM2G012397 psa6 photosystem I reaction center6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene 100286020 Chr7 5,387,875 5,388,613 Zm00001d013039 GRMZM2G024150 psad1 photosystem I subunit d1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF147726 Chr5 3,603,517 3,604,227 Zm00001d038984 GRMZM2G451224 psah1 photosystem I H subunit1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank accession AF052076 Chr6 168,207,284 168,208,191 Zm00001d041819 GRMZM2G080107 psan1 photosystem I N subunit1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to Genbank sequence BT040227 Chr3 139,135,030 139,136,095 Zm00001d023713 GRMZM2G009048 psan2 photosystem I N subunit2 Chr10 16,577,449 16,578,394 Zm00001d036340 GRMZM2G102838 psb1 photosystem II1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr6 84,776,706 84,778,799 Zm00001d021763 GRMZM2G033885 psb29 photosystem II subunit29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene 542478 Chr7 162,636,525 162,637,839 Zm00001d049387 GRMZM2G174984 psb3 photosystem II3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT085953 Chr4 28,605,301 28,606,526 GRMZM5G834496 psbJ (cp) Wei & Han, 2016 ChrPt 63,347 63,469 Zm00001d042697 GRMZM2G077333 psbs1 photosystem II subunit PsbS1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY291061 Chr3 177,338,945 177,341,399 Zm00001d043175 GRMZM2G438551 psei1 cystatin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 190,628,817 190,634,540 Zm00001d012068 GRMZM2G030717 psei10 cystatin10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 167,588,205 167,588,672 Zm00001d012561 GRMZM2G012160 psei2 cystatin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 176,655,420 176,657,307 Zm00001d038558 GRMZM2G440968 psei3 cystatin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,804,909 159,805,962 Zm00001d008268 GRMZM2G013461 psei4 cystatin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 3,546,648 3,549,333 Zm00001d038173 GRMZM2G024264 psei5 cystatin5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 150,515,309 150,517,736 Zm00001d029630 GRMZM2G401328 psei6 cystatin6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 80,665,246 80,665,596 Zm00001d029628 GRMZM2G148925 psei7 cystatin7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 80,600,855 80,601,549 Zm00001d029631 GRMZM2G401374 psei8 cystatin8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 80,672,733 80,673,116 AC196110.4_FG004 psei9 cystatin9 from alignment of cloning primers in van der Linde et al 2012 Chr4 15,343,574 15,344,100 Zm00001d018727 GRMZM2G044194 psk1 phytosulfokine peptide precursor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BK000133 Chr7 3,152,513 3,153,505 GRMZM2G079290 psk2 phytosulfokine2 Chr3 143,262,466 143,263,677 Zm00001d048006 GRMZM2G084859 psk3 phytosulfokine peptide precursor3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BK000135 Chr9 147,801,693 147,802,711 Zm00001d023385 GRMZM2G031261 psk4 phytosulfokine4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BK000136 Chr10 4,347,611 4,348,392 Zm00001d007857 GRMZM2G016677 pspb1 photosystem II oxygen evolving polypeptide1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene 107648855 Chr2 241,015,793 241,017,115 Zm00001d018779 GRMZM2G047954 pspb2 photosystem II oxygen evolving polypeptide2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence AY103732 Chr7 5,051,813 5,053,391 Zm00001d012394 GRMZM2G149317 psy2 phytoene synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 173,522,111 173,525,090 Zm00001d021410 psy3 phytoene synthase3 v4 Chr7 151,481,395 151,484,398 Zm00001d012141 GRMZM2G091419 ptac10 plastid transcriptionally active chromosome 10 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AFW84282 Chr8 168,732,016 168,736,038 Zm00001d043325 GRMZM5G897926 ptac12 plastid transcriptionally active chromosome 12 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT042419 & Williams-Carrier et al. 2014 Chr3 196,559,859 196,566,398 Zm00001d009723 GRMZM5G807767 ptac14 plastid transcriptionally active14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr8 77,904,227 77,909,237 Zm00001d018401 GRMZM2G180418 ptac17 plastid transcriptionally active17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 219,999,576 220,004,268 Zm00001d030153 GRMZM2G306104 ptac18 plastid transcriptionally active18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 109,048,438 109,048,917 Zm00001d022599 GRMZM2G122116 ptac2 plastid transcriptionally active chromosome 2 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DAA64282 Chr7 180,824,817 180,834,362 Zm00001d045046 GRMZM2G024530 ptf1 Pi starvation-induced transcription factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 10,972,295 10,977,439 Zm00001d043779 GRMZM2G050596 pth1 peptidyl-tRNA hydrolase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 209,987,653 209,999,017 Zm00001d037783 GRMZM2G328785 ptk1 protein kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 137,664,274 137,666,727 Zm00001d052376 GRMZM2G099754 ptk2 protein kinase homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100283338 Chr4 188,525,182 188,530,268 Zm00001d031509 GRMZM2G151216 ptk3 receptor-like protein kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to GenBank acsession AF24304 to B73_V2 assembly Chr1 192,301,631 192,304,353 Zm00001d005135 AC217842.3_FG001 ptk4 protein kinase homolog4 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of GenBank accession M62985 to B73_v2 Chr2 160,460,364 160,465,842 Zm00001d008477 GRMZM2G473511 ptk5 receptor-like kinase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF100769 Chr8 9,807,195 9,830,853 Zm00001d033800 GRMZM5G867390 ptr1 peptide transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Tnani et al 2013 Chr1 274,110,065 274,115,179 Zm00001d013672 AC211276.4_FG008 pve1 puncate vascular expression1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Zhang et al 2012 Chr5 17,000,666 17,001,748 Zm00001d014123 GRMZM2G134947 px13 peroxidase 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF037031 and AF037033 Chr5 33,202,990 33,204,555 Zm00001d002897 GRMZM2G108219 px14 peroxidase14 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Y13905 Chr2 26,123,823 26,125,478 Zm00001d022457 GRMZM2G427815 px3 peroxidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 178,107,698 178,109,315 Zm00001d037550 GRMZM2G450233 px5 peroxidase 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 129,101,873 129,103,497 Zm00001d021368 GRMZM5G809292 pyg7 pale yellowgreen7 Chr7 150,079,651 150,084,317 Zm00001d030020 GRMZM2G033526 pyk1 pyruvate kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73 RefGen_v2 (Pouvreau et al 2011) Chr1 99,945,344 99,950,682 Zm00001d023379 GRMZM2G004534 pyk2 pyruvate kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 4,293,119 4,298,209 Zm00001d047054 GRMZM2G144730 pyk3 pyruvate kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Pouvreau et al 2011 Chr9 116,805,364 116,810,796 Zm00001d016105 GRMZM2G063882 pyl10 pyrabactin resistance-like protein10 Chr5 144,804,711 144,808,906 Zm00001d002533 GRMZM2G405064 pyl12 pyrabactin resistance-like protein12 Chr2 14,891,505 14,892,330 Zm00001d016294 GRMZM2G154987 pyl3 pyrabactin resistance-like protein3 Chr5 155,926,763 155,927,329 Zm00001d010445 GRMZM2G165567 pyl8 pyrabactin resistance-like protein8 Chr8 115,433,371 115,435,609 Zm00001d037719 GRMZM2G133631 pyl9 pyrabactin resistance-like protein9 Chr6 135,118,687 135,122,165 Zm00001d027367 GRMZM2G320099 pyrd1 pyrimidine deaminase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Husnain et al 2013 Chr1 3,807,343 3,810,146 Zm00001d016475 GRMZM2G090068 pyrr1 pyrimidine reductase riboflavin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Hasnain et al., 2013 Chr5 163,826,847 163,837,823 Zm00001d025003 GRMZM2G007721 pza00048 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 99,104,436 99,134,098 Zm00001d053548 GRMZM2G121790 pza00067 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 233,637,127 233,642,207 Zm00001d021147 GRMZM2G040634 pza00111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 144,097,014 144,107,041 Zm00001d031921 GRMZM2G314292 pza00131 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 206,850,565 206,850,807 Zm00001d019423 GRMZM2G104258 pza00132 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 33,001,953 33,007,315 Zm00001d046971 GRMZM2G110408 pza00152 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 113,591,821 113,595,110 Zm00001d016274 GRMZM2G012923 pza00270 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 155,133,354 155,138,211 Zm00001d051967 GRMZM2G364068 pza00271 Gene model association inferred from similarity with B73 RefGen_v3 gene models included in LOC103654145 by NCBI Chr4 175,609,307 175,611,318 Zm00001d044971 GRMZM2G142072 pza00285 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 8,641,891 8,655,103 Zm00001d040360 GRMZM2G022088 pza00297 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 39,908,343 39,913,413 Zm00001d044464 GRMZM2G002578 pza00316 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 228,879,986 228,881,480 Zm00001d052561 GRMZM2G011173 pza00332 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 193,202,058 193,205,855 Zm00001d041767 GRMZM2G153087 pza00363 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 136,598,676 136,603,856 Zm00001d032894 GRMZM2G118917 pza00381 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 241,894,333 241,913,759 Zm00001d041603 GRMZM2G122443 pza00413 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 129,427,114 129,430,257 Zm00001d022584 GRMZM2G434696 pza00424 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 180,337,187 180,348,782 Zm00001d037521 GRMZM2G002959 pza00473 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 128,039,738 128,045,204 Zm00001d005539 GRMZM2G047095 pza00495 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 178,058,279 178,065,291 Zm00001d002742 GRMZM2G101181 pza00497 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,198,460 21,202,631 Zm00001d005513 GRMZM2G030312 pza00515 Chr2 176,946,884 176,956,922 Zm00001d043851 GRMZM2G152127 pza00538 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 212,034,975 212,041,814 Zm00001d042395 GRMZM2G164475 pza00667 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 164,412,499 164,415,646 Zm00001d049958 GRMZM2G049525 pza00726 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 55,678,978 55,684,958 Zm00001d029714 GRMZM2G030529 pza00752 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,647,801 83,656,803 Zm00001d042664 GRMZM2G081652 pza00783 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 175,917,267 175,920,386 Zm00001d009495 GRMZM2G101042 pza00793 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 67,221,503 67,222,084 Zm00001d012850 GRMZM2G313481 pza00818 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 1,084,640 1,087,652 Zm00001d042269 GRMZM2G031584 pza00827 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 158,421,207 158,424,170 Zm00001d011956 GRMZM2G054380 pza00838 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 165,140,334 165,155,029 Zm00001d029865 GRMZM2G089121 pza00944 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 90,965,701 90,968,044 Zm00001d034319 GRMZM2G038964 pza00978 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 289,129,916 289,132,811 Zm00001d025433 GRMZM2G072337 pza01089 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 118,612,121 118,615,983 Zm00001d044184 GRMZM2G041015 pza01154 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 221,301,455 221,304,723 Zm00001d045315 GRMZM2G102596 pza01272 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 18,806,523 18,809,336 Zm00001d017043 GRMZM2G089517 pza01304 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 183,518,512 183,521,743 Zm00001d044478 GRMZM2G061681 pza01360 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 229,247,796 229,256,127 Zm00001d042476 GRMZM2G059108 pza01396 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 168,999,383 169,003,373 Zm00001d035933 GRMZM2G103230 pza01527 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 61,046,505 61,053,692 Zm00001d037677 GRMZM2G403007 pza01552 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 133,754,895 133,755,200 Zm00001d008327 GRMZM2G044128 pza01623 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 5,397,381 5,399,132 Zm00001d024418 GRMZM2G112782 pza01677 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 70,186,132 70,189,912 Zm00001d020974 GRMZM2G168364 pza01714 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 138,260,086 138,261,759 Zm00001d005831 GRMZM2G061885 pza01735 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 190,284,721 190,291,227 Zm00001d046364 GRMZM2G305822 pza01791 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 84,217,900 84,227,494 Zm00001d024538 GRMZM2G001530 pza01877 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 77,078,388 77,079,341 Zm00001d033552 GRMZM2G068259 pza01921 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 266,967,929 266,975,303 Zm00001d019629 GRMZM2G054803 pza01936 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 46,898,944 46,905,237 Zm00001d020807 GRMZM2G115304 pza01946 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 133,502,732 133,510,166 Zm00001d016797 GRMZM2G165631 pza02040 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 176,180,755 176,186,882 Zm00001d025286 GRMZM2G023194 pza02128 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 112,660,019 112,662,739 Zm00001d044490 GRMZM2G369931 pza02182 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 229,584,377 229,586,793 Zm00001d007596 GRMZM2G150383 pza02266 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 235,925,333 235,926,658 Zm00001d020052 GRMZM2G088849 pza02291 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 88,709,984 88,712,122 Zm00001d002580 GRMZM2G125494 pza02337 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 15,969,358 15,979,838 Zm00001d045122 GRMZM2G455568 pza02344 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 13,446,264 13,449,337 Zm00001d020748 GRMZM2G467907 pza02365 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 131,101,945 131,106,713 Zm00001d022209 GRMZM2G158021 pza02373 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 172,900,966 172,906,885 Zm00001d021903 GRMZM2G072526 pza02386 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,716,406 165,721,222 Zm00001d042621 GRMZM2G110398 pza02402 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 174,100,666 174,105,367 Zm00001d051387 GRMZM2G098800 pza02411 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 156,767,880 156,770,006 Zm00001d052901 GRMZM2G073199 pza02421 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 204,071,169 204,075,125 Zm00001d044693 GRMZM2G000660 pza02423 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 235,061,755 235,065,086 Zm00001d040034 GRMZM2G054050 pza02427 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 23,839,256 23,843,414 Zm00001d003590 GRMZM2G005346 pza02450 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 49,123,838 49,128,914 Zm00001d049452 GRMZM2G070639 pza02457 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 30,714,265 30,717,256 Zm00001d013251 GRMZM2G072658 pza02462 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,132,169 7,135,357 Zm00001d038292 GRMZM2G106218 pza02472 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,563,038 153,569,387 Zm00001d038007 GRMZM2G141760 pza02478 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 145,000,655 145,009,587 Zm00001d053155 GRMZM2G026442 pza02479 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 216,733,100 216,760,207 Zm00001d018489 GRMZM2G013981 pza02480 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 221,702,963 221,706,664 Zm00001d028098 GRMZM2G119104 pza02487 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 22,960,075 22,971,879 Zm00001d023279 GRMZM2G152007 pza02554 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,032,914 2,036,564 Zm00001d014771 GRMZM2G116434 pza02676 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 62,609,231 62,613,757 Zm00001d007712 GRMZM2G372180 pza02727 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 237,946,938 237,954,326 Zm00001d029375 GRMZM2G410479 pza02791 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 68,088,360 68,098,674 Zm00001d045864 GRMZM2G465169 pza02861 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 44,506,873 44,511,952 Zm00001d005228 GRMZM2G163769 pza02939 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 164,595,462 164,597,890 Zm00001d024425 GRMZM2G106590 pza02941 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 70,492,332 70,495,711 Zm00001d035616 GRMZM2G137930 pza02948 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 37,235,178 37,239,054 Zm00001d034251 GRMZM2G068028 pza02957 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 287,921,614 287,925,375 Zm00001d023706 GRMZM2G181251 pza02961 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,400,383 16,407,915 Zm00001d051320 GRMZM2G100716 pza02992 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 153,916,343 153,921,722 Zm00001d035551 GRMZM2G099186 pza03047 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 32,902,155 32,905,929 Zm00001d015460 GRMZM2G058252 pza03049 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 91,587,913 91,590,987 Zm00001d035629 GRMZM2G037140 pza03063 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 37,509,032 37,510,146 Zm00001d036371 GRMZM2G126361 pza03069 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 86,007,940 86,011,821 Zm00001d040446 GRMZM2G003883 pza03070 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 43,701,925 43,707,461 Zm00001d042582 GRMZM2G080917 pza03073 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 172,730,778 172,735,201 Zm00001d053090 GRMZM2G106424 pza03081 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 213,265,064 213,268,433 Zm00001d013477 GRMZM2G130927 pza03092 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,477,179 12,482,863 Zm00001d003064 GRMZM2G048295 pza03121 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 30,987,718 30,989,878 Zm00001d044107 GRMZM2G143328 pza03146 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,453,611 219,454,543 Zm00001d051269 GRMZM2G111045 pza03152 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 151,309,707 151,312,076 Zm00001d043687 GRMZM2G088783 pza03154 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 207,411,767 207,413,717 Zm00001d018097 GRMZM2G159547 pza03167 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 214,127,646 214,129,053 Zm00001d028930 GRMZM2G070849 pza03168 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 51,839,504 51,841,800 Zm00001d008528 GRMZM2G096358 pza03178 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 11,883,571 11,885,380 Zm00001d011669 GRMZM2G003406 pza03182 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 158,166,587 158,167,961 Zm00001d043131 GRMZM2G139688 pza03191 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 189,941,282 189,945,237 Zm00001d032179 GRMZM2G131937 pza03193 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 215,957,280 215,958,780 Zm00001d025664 GRMZM2G173633 pza03196 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 125,369,798 125,371,471 Zm00001d050400 GRMZM2G111117 pza03203 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 85,967,006 85,968,538 Zm00001d013801 GRMZM2G070523 pza03226 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 20,673,284 20,676,096 Zm00001d029853 GRMZM2G053720 pza03240 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 90,315,517 90,318,180 Zm00001d013801 GRMZM2G070523 pza03274 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 20,673,284 20,676,096 Zm00001d028490 GRMZM2G372398 pza03344 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 36,826,368 36,843,555 Zm00001d044324 GRMZM2G028037 pza03391 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,197,973 225,203,272 Zm00001d050943 GRMZM2G020409 pza03409 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 132,886,764 132,891,622 Zm00001d051043 GRMZM2G407044 pza03459 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 138,316,944 138,322,251 Zm00001d045864 GRMZM2G465169 pza03469 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 44,506,873 44,511,952 Zm00001d024022 GRMZM2G472703 pza03491 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 37,311,469 37,313,771 Zm00001d039469 GRMZM2G077197 pza03527 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 5,145,889 5,150,710 Zm00001d006008 GRMZM2G112165 pza03529 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 195,179,025 195,182,945 Zm00001d031332 GRMZM2G024668 pza03531 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 186,376,331 186,380,883 Zm00001d050655 GRMZM2G156105 pza03536 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 112,405,476 112,406,505 Zm00001d010928 GRMZM2G065599 pza03612 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 133,839,411 133,861,487 Zm00001d019627 GRMZM2G077361 pza03723 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 46,612,501 46,650,526 GRMZM2G048170 pza03728 Chr7 142,818,487 142,819,699 Zm00001d042966 GRMZM2G084465 pza03733 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 185,204,150 185,206,008 Zm00001d042966 GRMZM2G084465 pza03735 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 185,204,150 185,206,008 Zm00001d002184 GRMZM2G164400 pza03747 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 7,537,954 7,546,246 Zm00001d014863 GRMZM2G145041 pzb00232 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 66,024,695 66,027,984 Zm00001d021046 GRMZM2G143955 pzb00752 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 141,160,173 141,163,742 Zm00001d046444 GRMZM2G022558 pzb00761 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 90,216,733 90,219,166 Zm00001d014150 GRMZM2G126988 pzb00869 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 34,229,299 34,244,983 Zm00001d053107 GRMZM2G002652 pzb01021 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 214,129,873 214,132,827 Zm00001d006476 GRMZM2G171707 pzb01103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 209,512,508 209,518,574 Zm00001d045481 GRMZM2G082855 pzb01110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 23,988,206 23,995,123 Zm00001d025997 GRMZM2G016939 pzb01111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 135,684,027 135,687,837 Zm00001d014986 GRMZM2G020366 pzb01112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 71,085,221 71,092,386 Zm00001d023559 GRMZM2G046284 pzb01301 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 10,215,795 10,217,698 Zm00001d046979 GRMZM2G313162 pzb01358 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 113,964,897 113,976,963 Zm00001d032703 GRMZM2G107629 pzb01647 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 235,316,064 235,322,119 Zm00001d028429 GRMZM2G102347 pzb01662 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 34,709,436 34,713,166 Zm00001d028208 GRMZM2G079823 pzb01957 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 26,428,405 26,434,744 Zm00001d010796 GRMZM2G058745 pzb02155 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 128,039,610 128,045,077 Zm00001d042312 GRMZM2G471529 pzb02179 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 160,473,898 160,480,245 Zm00001d013777 GRMZM2G087233 qm1 QM1 homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 19,923,773 19,930,072 Zm00001d038927 GRMZM2G113216 qsox1 thiol oxidoreductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 167,149,767 167,155,236 Zm00001d026147 GRMZM5G822829 r1 colored1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 139,780,968 139,790,276 Zm00001d020430 GRMZM2G003927 ra1 ramosa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 113,572,410 113,572,937 Zm00001d039694 AC233943.1_FG002 ra2 ramosa2 Gene model association inferred from similarity with B73 RefGen_v3 gene models less than 1/3 of gene based on alignment with cDNA BT035538 GI:194692917 and genomic sequence DQ327701.1 (Jul 2011) Chr3 12,158,280 12,159,065 Zm00001d022193 GRMZM2G014729 ra3 ramosa3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 172,484,959 172,489,194 Zm00001d013568 GRMZM2G165901 rab15 responsive to abscisic acid15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 14,451,040 14,451,980 Zm00001d013169 GRMZM2G091535 rab28 abscisic acid-responsive28 Gene model association inferred from similarity with B73 RefGen_v3 gene models chr 5 hit Chr5 5,800,736 5,801,750 Zm00001d027740 GRMZM2G472236 rab30 responsive to abscisic acid30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 12,442,621 12,443,983 Zm00001d038923 GRMZM2G038032 rack1 receptor for activated C kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models receptor for activated C kinase; from: Wang B et al 2014 Chr6 167,106,090 167,108,422 Zm00001d009480 GRMZM2G040477 rack2 receptor for activated C kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models receptor for activated C kinase; chr 8 paralog; from: Wang B et al 2014 Chr8 66,824,808 66,826,892 Zm00001d053917 rad1 RAD1 DNA repair protein homolog Chr4 243,631,001 243,639,724 Zm00001d021898 GRMZM2G121543 rad51a recombination protein51 gene a Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2014 Chr7 165,620,035 165,624,084 Zm00001d041757 GRMZM2G084762 rad51b recombination protein51 gene b Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al., 2014 Chr3 136,133,287 136,136,626 Zm00001d044278 GRMZM2G123089 rad51c recombination protein51 gene c Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al, 2014 Chr3 223,869,824 223,874,157 Zm00001d022332 GRMZM2G055464 rad51d recombination protein51 gene d Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al, 2014 Chr7 175,618,085 175,622,494 Zm00001d010986 AC219006.2_FG007 rad51e recombination protein51 gene e Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al, 2014 Chr8 135,932,034 135,940,852 Zm00001d001812 GRMZM2G457621 raf1 Rubisco Assembly Factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Feiz et al., 2012 Chr2 1,341,011 1,342,402 Zm00001d034715 GRMZM2G139123 raf2 rubisco accumulation factor2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Feiz et al., 2014 Chr1 300,526,733 300,527,389 Zm00001d039685 GRMZM2G150906 rafs1 raffinose synthase1 Chr3 11,843,728 11,847,491 Zm00001d031303 GRMZM2G050273 rafs2 raffinose synthase2 Chr1 185,700,379 185,710,906 Zm00001d003280 rafs3 raffinose synthase3 Chr2 38,636,040 38,640,054 Zm00001d010987 GRMZM2G700665 rap2 rap2.7 orthologue Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 136,009,216 136,012,084 Zm00001d023230 GRMZM2G048067 raptor1 regulatory-associated protein of TOR1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 954,679 966,602 Zm00001d003347 GRMZM2G330430 ras1 ras related protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project Chr2 41,022,707 41,025,532 Zm00001d012954 GRMZM2G144008 ras11B2 ras-related protein11B2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 2,343,012 2,343,815 Zm00001d020102 GRMZM2G124732 ras11C2 ras-related protein11C2 Chr7 92,117,151 92,120,164 Zm00001d039016 GRMZM2G020661 ras11C3 ras-related protein11C3 Chr6 168,723,799 168,725,535 Zm00001d046313 GRMZM2G018619 ras11D1 ras-related protein11D1 Chr9 79,854,295 79,858,733 Zm00001d028002 GRMZM2G164527 ras11E1 ras-related protein11E1 Chr1 19,961,083 19,963,559 Zm00001d005504 GRMZM2G019119 ras11E2 ras-related protein11E2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 176,567,431 176,570,578 Zm00001d014278 GRMZM2G122805 ras11E3 ras-related protein11E3 Chr5 39,066,404 39,076,918 Zm00001d031562 AC197246.3_FG001 ras11G1 ras-related protein11G1 Chr1 194,370,600 194,371,395 Zm00001d002945 GRMZM2G176677 ras18A1 ras-related protein18A1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT087588; nactf120 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr2 27,817,387 27,825,275 Zm00001d048393 AC149818.2_FG001 ras18B1 ras related protein11B1 Chr9 155,557,499 155,563,185 Zm00001d025660 GRMZM2G173878 ras2 Ras-related protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 125,342,471 125,344,978 Zm00001d021551 GRMZM2G075719 ras6A1 ras-related protein6A1 Chr7 155,647,955 155,651,800 Zm00001d008984 GRMZM2G058366 ras7B1 ras-related protein7B1 Chr8 28,569,168 28,585,487 Zm00001d010733 GRMZM5G811797 ras7B2 ras-related protein7B2 Chr8 126,285,347 126,288,165 Zm00001d038380 GRMZM5G878008 ras8A2 ras-related protein8A2 Chr6 155,926,731 155,930,493 Zm00001d007763 GRMZM2G149847 ras8B1 ras related protein8B1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 239,247,946 239,251,806 Zm00001d011704 GRMZM2G316113 rbap1 WD-repeat protein RBAP1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 159,242,817 159,245,870 Zm00001d043682 GRMZM2G137965 rbap2 WD-repeat protein RBAP2 Gene model association inferred from similarity with B73 RefGen_v3 gene models best match to nfc101 sequence AY10048 Chr3 207,218,328 207,225,184 Zm00001d018984 GRMZM2G093815 rbd1 RNA-binding domain1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 11,870,198 11,870,719 Zm00001d042961 GRMZM2G426953 rboh1 respiratory burst oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from DQ855284 Chr3 184,964,596 184,969,233 Zm00001d043543 GRMZM2G138152 rboh2 respiratory burst oxidase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models covers a gap in B73_v2 assembly Chr3 203,425,340 203,444,747 Zm00001d038762 GRMZM2G043435 rboh3 respiratory burst oxidase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models covers a gap in B73_v2 Chr6 164,016,293 164,027,578 Zm00001d052653 GRMZM2G441541 rboh4 respiratory burst oxidase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EF364442 Chr4 196,008,355 196,012,956 Zm00001d048593 GRMZM2G162200 rca1 RUBISCO activase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: W21622 Chr4 921,608 923,738 Zm00001d048593 GRMZM2G162200 rca2 RUBISCO activase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF305876 Chr4 921,608 923,738 Zm00001d048592 GRMZM2G162282 rca3 RUBISCO activase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: JX863889 Chr4 919,276 920,997 Zm00001d042880 GRMZM2G302245 rcc1 regulator of chromosome condensation1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zheng et al., 2016 Chr3 182,654,842 182,662,782 Zm00001d003632 GRMZM2G003565 rcc2 regulator of chromosome condensation2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zheng et al., 2016 Chr2 51,106,489 51,111,751 Zm00001d050380 GRMZM2G135770 rcc3 regulator of chromosome condensation3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zheng et al., 2016 Chr4 84,839,682 84,845,035 Zm00001d036091 GRMZM2G074850 rcp1 root cap protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT056139 Chr6 71,737,372 71,738,505 Zm00001d041984 GRMZM2G097316 rcph1 root-cap periphery1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AB021175 Chr3 146,589,411 146,590,838 Zm00001d052527 GRMZM2G146502 rcph2 root cap periphery gene2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AB021176 Chr4 192,219,140 192,220,628 Zm00001d040988 GRMZM2G145201 rdr6 RNA-dependent RNA polymerase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Petsch et al., 2015 Chr3 88,431,308 88,434,145 Zm00001d038475 GRMZM2G092001 reas1 ribosome export associated1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Qi et al., 2015 Chr6 158,240,771 158,284,439 Zm00001d024523 GRMZM2G042992 rel2 ramosa1 enhancer locus2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 75,993,828 76,002,912 Zm00001d047897 GRMZM2G550865 relk3 rel2-like3 Chr9 144,666,584 144,679,077 Zm00001d028185 GRMZM2G107774 remo1 remorin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Jamann et al., 2016 Chr1 25,738,664 25,741,208 Zm00001d027330 GRMZM2G137352 remo2 remorin2 Chr1 3,051,538 3,052,986 Zm00001d045706 GRMZM2G058675 rf2 restorer of fertility2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 34,496,670 34,509,714 Zm00001d048086 GRMZM2G086934 rfa1 replication factor A homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 149,842,814 149,846,476 Zm00001d037540 GRMZM6G949474 rfz1 rat frizzled homolog1 Chr6 128,726,080 128,728,807 Zm00001d035256 GRMZM2G020187 rgd1 ragged seedling1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 17,759,389 17,765,846 Zm00001d029573 GRMZM5G892991 rgd2 ragged seedling2 v2; from GQ918490 (Schnable & Lyons, 2011); was GRMZM2G365589 in v1; Douglas et al. 2010 Chr1 77,065,338 77,070,098 Zm00001d016836 GRMZM5G849788 rgh3 rough endosperm3 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 fragments gene into GRMZM5G849788 and GRMZM2G128228 (from Mark Settles, 4/2013); assigned by the Grassius project to c3h25, (Yilmaz et al 2009) Chr5 177,823,355 177,829,656 Zm00001d009964 GRMZM2G093186 rgp2 ras-related protein RGP2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 92,639,578 92,640,662 Zm00001d012922 GRMZM2G415491 rh3 RNA helicase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models From Askura et al 2012 Chr5 1,978,763 1,993,142 Zm00001d034721 AC198418.3_FG005 rh4 RNA helicase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 gene model corresponds to B73_v1 GRMZM2G163072 (maizesequence.org); was GRMZM2G163072 in B73_v1, not in B73_v2; from Asakura et al 2012 Chr1 300,730,265 300,737,926 Zm00001d013466 GRMZM2G024690 rhcp1 ring hc protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2017 Chr5 12,264,544 12,273,493 Zm00001d031179 GRMZM2G131254 rhn1 ras-related protein RHN1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 181,314,460 181,317,451 Zm00001d011162 GRMZM2G106960 ric1 ras-related protein RIC1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 141,382,327 141,385,399 Zm00001d019922 GRMZM2G049155 rif1 r-interacting factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 76,564,755 76,573,638 Zm00001d010371 GRMZM2G063536 rip1 ribosome-inactivating protein1 Chr8 111,651,373 111,652,278 Zm00001d022032 GRMZM2G119705 rip2 ribosome-inactivating protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 168,319,347 168,320,506 Zm00001d016134 GRMZM2G162748 ris1 iron-sulfur protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100273354 Chr5 146,042,173 146,043,738 Zm00001d053432 GRMZM2G038365 ris2 iron-sulfur protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: W49887 (chr 4 hit) Chr4 231,193,933 231,195,575 Zm00001d048527 GRMZM2G109987 rld1 rolled leaf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 157,815,873 157,824,341 Zm00001d027317 GRMZM2G042250 rld2 rolled leaf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ286526 Chr1 2,818,955 2,826,611 Zm00001d045207 GRMZM2G099324 rlk1 receptor-like protein kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yang et al., 2017 Chr9 16,080,083 16,082,452 Zm00001d044328 GRMZM2G087628 rlsb1 rbcl rna s1-binding domain protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Bowman et al., 2013 Chr3 225,330,767 225,334,170 Zm00001d038835 GRMZM2G546254 rlsb2 rbcl rna s1-binding domain protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models From sequence in Yerramsetty et al., 2016 Chr6 165,526,277 165,530,828 Zm00001d038113 GRMZM2G154946 rmr1 required to maintain repression1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 148,382,390 148,390,037 Zm00001d002812 GRMZM2G009208 rmr2 required to maintain repression 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Barbour et al., 2012 Chr2 23,397,758 23,400,810 Zm00001d031459 GRMZM2G007681 rmr6 required to maintain repression6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from GenBank FJ426107 Chr1 190,964,811 190,978,369 Zm00001d043146 GRMZM2G035820 rnc1 ribonuclease III domain protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment with cDNA EF650835|gi|149980666 to B73_v2 (Jul 2011) Chr3 190,108,063 190,112,698 Zm00001d022237 GRMZM2G158835 rnp1 RNA binding protein 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 173,379,234 173,381,283 Zm00001d038467 GRMZM2G100639 roa1 replication origin activator1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 157,922,722 157,927,689 Zm00001d018004 GRMZM2G415327 rop1 Rho-related protein from plants 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene 541773 Chr5 211,768,723 211,777,331 Zm00001d053899 GRMZM5G846811 rop2 Rho-related protein from plants2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment on B73_v2 by mRNA seqence AF126053.2 Chr4 243,343,911 243,347,704 Zm00001d037911 GRMZM2G100505 rop3 Rho-related protein from plants 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,752,465 141,755,756 Zm00001d018573 GRMZM2G375002 rop4 Rho-related protein from plants 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 223,568,967 223,577,082 Zm00001d044802 GRMZM2G102946 rop5 Rho-related protein from plants 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 2,773,748 2,789,581 Zm00001d038688 GRMZM2G176217 rop6 Rho-related protein6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene 542017 Chr6 162,602,604 162,605,160 Zm00001d010732 AC209819.3_FG012 rop7 Rho-related protein from plants 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,282,952 126,285,155 Zm00001d052273 GRMZM2G001953 rop8 Rho-related protein from plants 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF376054 Chr4 185,525,524 185,529,258 Zm00001d015036 GRMZM5G803949 rop9 Rho-related protein from plants 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models AY163377, mRNA alignment to B73_v2 (Nov 2011) Chr5 72,869,353 72,873,307 Zm00001d038302 GRMZM2G141792 ros1 repressor of silencing1 Chr6 153,936,300 153,956,392 Zm00001d023317 GRMZM2G069382 rp1 resistance to Puccinia sorghi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,861,471 2,865,816 Zm00001d041362 AC230011.2_FG002 rp3 resistance to Puccinia sorghi3 Gene model association inferred from similarity with B73 RefGen_v3 gene models From homology to genbank accession AF489541 Chr3 114,244,392 114,251,164 Zm00001d053595 GRMZM2G172883 rpd3 RPD3 histone deacetylase homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF035815 Chr4 235,825,666 235,832,657 Zm00001d027841 GRMZM2G026807 rpe1 Ribulose-phosphate 3-epimerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,831,571 14,846,630 Zm00001d009522 GRMZM2G345039 rph1 RNase PH homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez gene 100192964 Chr8 68,814,240 68,819,306 Zm00001d044615 GRMZM2G467086 rpl10 ribosomal protein L10 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 233,458,261 233,460,440 Zm00001d021508 GRMZM2G180724 rpl15b 60S ribosomal protein L15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 154,481,841 154,484,342 Zm00001d010009 GRMZM2G119169 rpl17a ribosomal protein L17a Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene Chr8 94,987,331 94,992,881 Zm00001d049815 GRMZM2G702426 rpl17b ribosomal protein L17b Gene model association inferred from similarity with B73 RefGen_v3 gene models Entrez Gene & Classical Gene & BT060719 Chr4 45,901,761 45,904,117 Zm00001d031611 GRMZM2G148744 rpl17c ribosomal protein L17c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 196,150,569 196,153,475 Zm00001d017449 GRMZM2G171444 rpl19 ribosomal protein L19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 196,103,545 196,106,389 Zm00001d052216 GRMZM2G028216 rpl29 ribosomal protein L29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 183,515,085 183,516,581 Zm00001d008245 GRMZM2G027728 rpl30 ribosomal protein L30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 2,490,496 2,493,628 Zm00001d003493 GRMZM2G145758 rpl32 ribosomal protein L32 homolog32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 46,024,387 46,026,629 Zm00001d016549 GRMZM2G043279 rpl35 60S ribosomal protein L35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 167,009,621 167,011,782 Zm00001d018383 GRMZM2G100467 rpl39 ribosomal protein L39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 219,689,034 219,689,884 Zm00001d008228 GRMZM2G157007 rpl40 50S ribosomal protein L40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 1,976,472 1,977,821 Zm00001d021652 GRMZM2G009412 rpl44 ribosomal protein L44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 159,150,824 159,153,011 Zm00001d042525 GRMZM5G815894 rpl5a 60S ribosomal protein L5-1 homolog a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 170,807,231 170,810,349 Zm00001d012161 GRMZM2G163081 rpl5b 60S ribosomal protein L5-1 homolog b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 169,183,712 169,186,572 Zm00001d004779 GRMZM2G174919 rpl7 ribosomal protein L7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU951421 Chr2 138,647,642 138,657,256 Zm00001d027714 GRMZM2G315806 rplp1 ribosomal large subunit pseudouridine synthase B Gene model association inferred from similarity with B73 RefGen_v3 gene models Missannotation: A putative gene missannotation (split gene) has been identified for this gene model using Compara homology predictions. Chr1 11,881,252 11,887,552 Zm00001d046835 GRMZM2G115564 rpo2 RNA polymerase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF127022 Chr9 107,924,548 107,935,828 Zm00001d022169 GRMZM2G381395 rpot1 RNA polymerase T phage-like 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 171,696,582 171,711,112 Zm00001d019108 GRMZM5G895282 rps1 Ribosomal protein S1-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: CX129574 Chr7 17,216,464 17,235,345 Zm00001d033951 GRMZM2G095511 rps10 ribosomal protein S10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,386,535 279,388,331 Zm00001d026286 GRMZM2G019325 rps11 ribosomal protein S11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr10 142,863,674 142,866,331 Zm00001d019219 GRMZM2G063340 rps12 ribosomal proteinS12 (homolog) Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU962633 Chr7 22,317,838 22,320,320 Zm00001d049666 GRMZM2G158034 rps13 ribosomal protein13 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X62455 Chr4 39,268,830 39,270,978 Zm00001d013648 GRMZM5G869564 rps15 ribosomal proteinS15 Chr5 16,157,006 16,159,967 Zm00001d037886 GRMZM2G093574 rps21a 40S ribosomal protein S21a Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT062080 Chr6 141,049,435 141,052,489 Zm00001d045448 GRMZM2G067303 rps22a ribosomal protein S22 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 22,516,151 22,518,341 Zm00001d016276 GRMZM2G091383 rps24 ribosomal protein S24 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU953725 Chr5 155,336,754 155,338,487 Zm00001d049933 GRMZM2G084868 rps25 ribosomal protein S25 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU957298 Chr4 53,889,726 53,891,170 Zm00001d053239 GRMZM2G066222 rps27 ribosomal protein S27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 221,656,653 221,658,921 Zm00001d016491 GRMZM2G377600 rps27b ribosomal protein S27b Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY106437 Chr5 164,555,551 164,557,626 Zm00001d013282 GRMZM2G132121 rps27c ribosomal protein S27c Gene model association inferred from similarity with B73 RefGen_v3 gene models from: DQ245897 Chr5 7,809,349 7,811,556 Zm00001d047697 GRMZM2G030293 rps28 ribosomal protein S28 Chr9 139,474,060 139,475,702 Zm00001d024511 GRMZM2G099352 rps3 ribosomal protein S3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 74,955,857 74,958,288 Zm00001d012878 GRMZM2G125271 rps4 ribosomal protein S4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF013487 Chr5 1,531,936 1,534,668 Zm00001d008387 GRMZM2G156673 rps5 ribosomal protein S5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY103625 Chr8 6,915,036 6,916,870 Zm00001d022180 GRMZM2G054136 rps6 ribosomal proteinS6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,990,566 172,003,904 Zm00001d053630 GRMZM2G336875 rps8 ribosomal protein S8 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models from: M95064 Chr4 237,401,529 237,403,959 GRMZM5G845244 rps8 (cp) 30S ribosomal protein S8 gene Wei & Han. 2016 ChrPt 78,488 78,898 Zm00001d007407 GRMZM2G003043 rrb1 related to retinoblastoma1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 231,036,635 231,047,416 Zm00001d052666 GRMZM2G153150 rrb2 related to retinoblastoma2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 196,473,381 196,480,603 Zm00001d031678 GRMZM2G033828 rrb3 retinoblastoma family3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU945294 Chr1 198,531,549 198,538,490 Zm00001d028714 GRMZM2G141386 rrm1 RNA recognition motif1 Chr1 44,013,642 44,016,256 Zm00001d016716 GRMZM5G868908 rrph1 RAR1 disease resistance protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from NM_001159033.1 in Wang et al 2014 Chr5 173,615,731 173,631,454 Zm00001d018742 GRMZM2G028041 rs1 rough sheath1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 3,845,026 3,851,209 Zm00001d030737 GRMZM2G403620 rs2 rough sheath2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 156,875,930 156,877,042 Zm00001d048401 AC149818.2_FG009 rtcl1 RTCS-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models based on sequence homology to rtcs1 Chr9 155,625,722 155,626,844 Zm00001d027679 GRMZM2G092542 rtcs1 rootless concerning crown and seminal roots1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Muthreich et al 2013 Chr1 10,992,938 10,994,177 Zm00001d030656 GRMZM2G166159 rte1 rotten ear1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chatterjee et al., 2014 Chr1 151,221,229 151,225,821 Zm00001d041590 GRMZM2G082203 rte2 rotten ear2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 128,629,007 128,633,579 Zm00001d039647 GRMZM2G051753 rte3 rotten ear3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 10,279,429 10,286,500 Zm00001d048447 GRMZM2G374989 rte4 rotten ear4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,595,023 156,602,824 Zm00001d042982 GRMZM2G302559 rte5 rotten ear5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 185,778,201 185,782,970 Zm00001d009789 GRMZM2G454327 rte6 rotten ear6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 81,398,779 81,405,752 Zm00001d033303 GRMZM2G099056 rth1 roothair defective1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 258,164,182 258,177,505 Zm00001d028826 GRMZM2G377215 rth3 roothair defective3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 47,787,874 47,789,877 Zm00001d030121 GRMZM2G436299 rth6 roothairless6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 107,181,209 107,185,354 Zm00001d011708 GRMZM5G832994 rtl1 reversion-to-ethylene sensitivity1 like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001151994 Chr8 159,401,583 159,404,367 Zm00001d043675 GRMZM2G077293 rtl2 reversion-to-ethylene sensitivity1 like2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT036282 Chr3 206,997,386 207,000,397 Zm00001d038852 GRMZM2G121208 rtl3 reversion-to-ethylene sensitivity1 like3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: ACN37097 Chr6 165,889,541 165,893,007 Zm00001d034485 GRMZM2G039592 rtl4 reversion-to-ethylene sensitivity1 like4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: NM_001150599 Chr1 294,247,552 294,249,062 Zm00001d049020 GRMZM2G017557 rtp1 root preferential1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 12,826,628 12,828,071 Zm00001d011588 GRMZM2G163848 rul1 rum1-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 155,128,553 155,133,508 Zm00001d043878 GRMZM2G037368 rum1 rootless with undetectable meristems1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From von Behrens et al 2011; iaa13 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr3 212,687,925 212,691,045 Zm00001d002781 GRMZM2G019919 rws1 RNA recognition water-stress protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF533364 Chr2 22,563,741 22,576,668 Zm00001d035183 GRMZM2G334584 rxo1 reaction to X. oryzae1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 8,514,154 8,561,029 Zm00001d036529 GRMZM2G430152 rz242a Chr6 91,275,079 91,276,099 Zm00001d014587 GRMZM2G168890 rz242b Chr5 54,424,032 54,427,698 Zm00001d040721 GRMZM2G462140 rz244b(dia) Chr3 59,860,481 59,869,531 Zm00001d040448 AC213600.3_FG002 rz382a Chr3 43,804,063 43,808,293 Zm00001d008236 GRMZM2G052875 rz382b Chr8 2,198,415 2,206,591 Zm00001d011081 GRMZM2G028986 rz390a(cyb5) Chr8 138,418,132 138,420,302 Zm00001d041963 GRMZM6G639283 rz390c(cyb5) Chr3 145,908,685 145,910,821 Zm00001d033338 GRMZM2G077214 rz403 Chr1 259,497,730 259,504,323 Zm00001d038392 GRMZM2G115398 rz444d Chr6 156,251,590 156,252,963 Zm00001d018443 GRMZM2G058289 rz446b Chr5 220,931,187 220,935,179 Zm00001d013669 GRMZM2G134980 rz474a(dnaj) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 16,901,324 16,905,867 Zm00001d053576 GRMZM2G320497 rz476a Chr4 235,104,770 235,108,555 Zm00001d016358 GRMZM2G029559 rz476b Chr5 159,037,923 159,041,603 Zm00001d042686 GRMZM2G129428 rz538b Chr3 176,925,627 176,927,183 Zm00001d049060 rz53b Chr4 14,442,996 14,443,265 Zm00001d017793 GRMZM2G147377 rz567a(klc) Chr5 206,964,939 206,969,131 Zm00001d051589 GRMZM2G060947 rz567b(klc) Chr4 163,588,760 163,592,644 Zm00001d052741 GRMZM2G147452 rz596b Chr4 199,478,963 199,481,434 Zm00001d053568 GRMZM2G154505 rz599b Chr4 234,742,154 234,742,759 Zm00001d013296 GRMZM2G051270 rz630f(sat) Chr5 7,994,244 7,998,113 Zm00001d046855 GRMZM2G029856 rz682 Chr9 108,417,554 108,419,212 Zm00001d015520 GRMZM2G060561 rz87(clp) Chr5 95,614,609 95,620,842 Zm00001d045894 GRMZM2G082962 rz953 Chr9 46,154,237 46,159,068 Zm00001d048112 GRMZM2G113295 rzfl1 RING zinc finger protein-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 150,377,793 150,378,578 Zm00001d003822 GRMZM2G056929 s1fa1 S1Fa-like-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 60,917,100 60,919,425 Zm00001d042344 GRMZM5G852502 sacd1 stearoyl-acyl-carrier-protein desaturase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From aa sequence in Du et al., 2016 Chr3 162,243,684 162,248,792 Zm00001d024273 GRMZM2G119305 sacd10 stearoyl-acyl-carrier-protein desaturase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Han et al., 2016 Chr10 60,915,073 60,917,622 Zm00001d025170 AC215690.3_FG002 sacd11 stearoyl-acyl-carrier-protein desaturase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 107,470,951 107,474,926 Zm00001d012033 GRMZM2G180399 sacd2 stearoyl-acyl-carrier-protein desaturase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from DQ192663 (sequence from Du et al., 2016) Chr8 166,838,901 166,842,661 Zm00001d030165 GRMZM2G143625 sacd3 stearoyl-acyl-carrier-protein desaturase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 109,910,640 109,911,650 Zm00001d030328 GRMZM2G003368 sacd4 stearoyl-acyl-carrier-protein desaturase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Han et al., 2016 Chr1 122,695,681 122,697,988 Zm00001d004019 GRMZM2G026793 sacd5 stearoyl-acyl-carrier-protein desaturase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Han et al., 2016 Chr2 76,032,746 76,036,570 Zm00001d050552 GRMZM2G027673 sacd6 stearoyl-acyl-carrier-protein desaturase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Han et al., 2016 Chr4 99,666,954 99,668,828 Zm00001d014498 GRMZM2G073540 sacd7 stearoyl-acyl-carrier-protein desaturase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Han et al., 2016 Chr5 50,401,776 50,403,002 Zm00001d021059 GRMZM5G883417 sacd8 stearoyl-acyl-carrier-protein desaturase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Han et al., 2016 Chr7 141,819,946 141,821,175 Zm00001d012221 GRMZM2G316362 sacd9 stearoyl-acyl-carrier-protein desaturase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Han et al., 2016 Chr8 170,366,926 170,368,457 Zm00001d023892 GRMZM2G014376 sad1 shikimate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100191894 Chr10 26,542,390 26,547,193 Zm00001d028693 GRMZM2G042639 saf1 safener induced1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,343,008 43,345,059 Zm00001d046599 GRMZM2G117935 sal1 supernumerary aleurone1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 98,003,371 98,003,985 Zm00001d023516 GRMZM2G142891 salt1 SalT homolog1 Chr10 8,543,363 8,544,872 Zm00001d025773 GRMZM2G125635 sam1 S-adenosylmethionine decarboxylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 129,108,410 129,115,766 Zm00001d003157 GRMZM2G154397 sam2 S-adenosyl methionine decarboxylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 33,981,493 33,984,783 Zm00001d040752 GRMZM2G038356 sar1 SAR homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 63,579,469 63,581,973 Zm00001d011735 GRMZM2G069203 sat1 serine acetyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF453837 Chr8 160,278,127 160,279,059 Zm00001d028154 GRMZM2G013430 sat2 serine acetyltransferase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF453838 Chr1 24,416,953 24,417,897 Zm00001d038737 GRMZM5G816110 sat3 serine acetyltransferase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF453836 Chr6 163,553,024 163,560,354 Zm00001d036463 GRMZM2G466908 saur1 small auxin up RNA1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 89,312,912 89,313,355 Zm00001d014844 GRMZM2G088753 sbe1 starch branching enzyme1 Classical Gene Chr5 65,186,102 65,197,475 Zm00001d011301 GRMZM2G005298 sbe3 starch branching enzyme3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 146,174,056 146,176,755 Zm00001d048959 GRMZM2G113470 sbip1a small basic membrane intrinsic protein1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 10,754,326 10,760,391 Zm00001d010325 GRMZM2G060922 sbip1b small basic membrane intrinsic protein1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 109,745,230 109,750,097 Zm00001d028951 GRMZM2G175038 sbip2a small basic membrane intrinsic protein2a Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez gene 542646 Chr1 52,645,733 52,648,243 Zm00001d015451 GRMZM2G111136 sbp1 SBP-domain protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ011614 & assigned by the Grassius project to sbp10 (Yilmaz et al 2009) Chr5 91,106,167 91,109,100 Zm00001d010309 GRMZM2G109354 sbp11 SBP-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 109,067,495 109,086,927 Zm00001d015410 GRMZM2G126827 sbp12 SBP-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 89,049,594 89,053,097 Zm00001d006451 GRMZM2G113779 sbp13 SBP-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,544,401 208,546,453 Zm00001d031487 GRMZM2G169270 sbp16 SBP-transcription factor16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 191,766,320 191,771,809 Zm00001d034730 GRMZM2G156756 sbp17 SBP-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 300,925,472 300,932,654 Zm00001d012015 GRMZM2G371033 sbp18 SBP-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,514,041 166,517,345 Zm00001d053775 GRMZM2G163813 sbp19 SBP-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 240,849,637 240,853,547 Zm00001d053756 GRMZM2G168229 sbp2 SBP-domain protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ011615; assigned by the Grassius project to sbp26 (Yilmaz et al 2009) Chr4 240,523,216 240,526,731 Zm00001d053890 GRMZM2G065451 sbp20 SBP-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 243,050,411 243,053,629 Zm00001d026175 GRMZM2G148467 sbp21 SBP-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,333,912 140,336,785 Zm00001d042319 GRMZM5G878561 sbp22 SBP-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 161,006,234 161,009,799 Zm00001d006028 GRMZM2G126018 sbp23 SBP-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,579,800 195,583,642 Zm00001d040571 GRMZM2G133646 sbp24 SBP-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 50,763,985 50,771,779 Zm00001d014698 GRMZM2G414805 sbp25 SBP-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 59,822,722 59,827,354 Zm00001d015233 GRMZM2G097275 sbp27 SBP-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 80,234,208 80,239,340 Zm00001d026491 GRMZM2G058588 sbp28 SBP-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,051,884 147,055,513 Zm00001d021573 GRMZM2G067624 sbp29 SBP-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 156,465,329 156,466,981 Zm00001d036692 GRMZM2G101499 sbp3 SBP-domain protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ011616 & assigned by the Grassius project to sbp14 (Yilmaz et al 2009) Chr6 97,811,384 97,814,731 GRMZM2G156621 sbp31 SBP-transcription factor 31 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 131,224,969 131,228,486 Zm00001d049165 GRMZM2G106798 sbp3 (GRASSIUS) SBP-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 18,638,440 18,650,497 Zm00001d046906 sbp4 SBP-domain protein4 v4 Chr9 109,930,589 109,934,102 Zm00001d019793 GRMZM2G110742 sbp4 (GRASSIUS) SBP-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 62,169,440 62,170,161 Zm00001d006091 GRMZM2G061734 sbp5 SBP-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 197,898,982 197,903,861 Zm00001d012916 GRMZM2G138421 sbp6 SBP-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 1,908,305 1,915,026 Zm00001d052905 GRMZM2G098557 sbp7 SBP-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 204,257,286 204,262,667 Zm00001d008176 GRMZM2G081127 sbp9 SBP-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 327,598 335,271 Zm00001d023684 GRMZM2G437435 sbt1 subtilisin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Lopez et al., 2016 Chr10 15,330,141 15,332,381 Zm00001d006669 GRMZM2G039538 sbt2 subtilisin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Lopez et al., 2016 Chr2 213,900,069 213,902,405 Zm00001d021912 GRMZM2G363552 sbt3 subtilisin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Lopez et al., 2016 Chr7 165,799,213 165,801,564 Zm00001d013015 GRMZM2G332976 sca1 short chain alcohol dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU965612 (Ma et al, 2015) Chr5 3,231,369 3,233,042 Zm00001d011080 GRMZM2G028393 sci1 subtilisin-chymotrypsin inhibitor homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 138,416,663 138,416,884 Zm00001d009646 GRMZM2G023872 scl1 scarecrow-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 74,205,128 74,206,555 Zm00001d035390 GRMZM2G014055 scmv1 resistance to sugarcane mosaic virus1 Chr6 24,034,207 24,035,363 Zm00001d025526 GRMZM2G075676 scp1 serine carboxypeptidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from JF682634 Chr10 121,359,009 121,363,755 Zm00001d052380 GRMZM2G131516 scro1 scarecrow1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AF263457 Chr4 188,747,594 188,751,193 Zm00001d002190 GRMZM2G121074 sda1 severe depolymerization of actin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Leiboff et al., 2015 Chr2 7,649,644 7,654,759 AC233961.1_FG001 sdg101 set domain gene101 Chr7 20,255,014 20,257,584 Zm00001d003679 GRMZM2G147619 sdg102 set domain gene102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 53,861,070 53,867,710 Zm00001d032343 GRMZM2G074094 sdg103 SET domain group 103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 223,237,080 223,240,559 Zm00001d002787 GRMZM2G021044 sdg104 SET domain-containing protein SET104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 22,588,333 22,591,980 Zm00001d010646 GRMZM2G140577 sdg105 set domain gene105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 122,873,951 122,875,909 Zm00001d006324 GRMZM2G409213 sdg106 set domain gene106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 204,611,682 204,615,749 Zm00001d002938 GRMZM2G357972 sdg107 set domain gene107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 27,443,632 27,447,830 Zm00001d049457 GRMZM2G149153 sdg108 set domain gene108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 30,893,684 30,906,303 Zm00001d020038 GRMZM2G130910 sdg110a set domain gene110a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 87,795,585 87,811,711 Zm00001d005563 GRMZM2G033694 sdg110b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 178,602,264 178,619,387 Zm00001d038541 GRMZM2G117458 sdg111 set domain gene111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,603,966 159,608,236 Zm00001d043135 GRMZM2G139710 sdg113 set domain gene113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 189,967,776 189,971,654 GRMZM2G033350 sdg115 set domain gene115 Chr3 213,339,505 213,342,831 Zm00001d006369 GRMZM2G105869 sdg116 set domain gene116 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 205,908,412 205,911,375 Zm00001d051590 GRMZM2G172427 sdg117 set domain gene117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 163,897,302 163,913,636 Zm00001d011956 GRMZM2G054380 sdg118 set domain gene118 Chr8 165,140,334 165,155,029 Zm00001d005650 GRMZM2G300955 sdg119 set domain gene119 Chr2 181,987,311 181,992,325 Zm00001d027838 GRMZM2G091916 sdg122 set domain gene122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,705,335 14,706,969 Zm00001d032990 GRMZM2G080462 sdg123 SET domain protein123 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542096 Chr1 245,857,450 245,866,245 Zm00001d023333 GRMZM2G473138 sdg127 set domain gene127 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 3,606,398 3,621,010 Zm00001d019907 GRMZM2G013794 sdg128 set domain gene128 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 74,613,007 74,659,068 Zm00001d015064 GRMZM2G305124 sdg129 set domain gene129 Chr5 73,927,017 73,928,549 Zm00001d013471 GRMZM2G457881 sdg130 set domain gene130 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,395,190 12,400,984 Zm00001d019520 GRMZM2G034288 sdg136 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 39,546,734 39,550,496 Zm00001d005445 GRMZM2G025924 sdg137 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 174,370,956 174,373,091 Zm00001d002185 GRMZM2G164400 sdg140 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 7,546,109 7,550,392 Zm00001d007657 AC217415.3_FG004 se1 sugary-enhancer1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Haro von Mogel, 2014 Chr2 237,080,087 237,080,608 Zm00001d011174 GRMZM2G081626 see2a senescence enhanced2a Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ131718 Chr8 141,805,331 141,812,617 Zm00001d044495 GRMZM2G093032 see2b senescence enhanced2b Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF082347 Chr3 229,664,664 229,670,336 Zm00001d048856 GRMZM2G169160 ser2 seryl-tRNA synthetase Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Y13053 Chr4 6,442,970 6,454,443 Zm00001d025580 GRMZM5G870959 serk1 somatic embryogenesis receptor-like kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models gene model GRMZM2G043670 on RefGen_v1 corresponds to the gene model GRMZM5G870959 on RefGen_v2. Chr10 122,855,595 122,861,043 Zm00001d016928 GRMZM2G115420 serk2 somatic embryogenesis receptor-like kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 180,247,597 180,253,566 Zm00001d050868 GRMZM2G150024 serk3 somatic embryogenesis receptor-like kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 127,596,451 127,602,837 Zm00001d025339 GRMZM2G147424 sfb1 SF1 binding protein candidate1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU959706 and assigned by the Grassius project, (Yilmaz et al 2009) to s1fa2 Chr10 114,701,647 114,705,196 Zm00001d028162 GRMZM2G159632 sfp1 sulfate permease1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF355602 Chr1 24,771,608 24,778,825 Zm00001d050283 GRMZM2G080178 sfp2 sulfate transporter2 Chr4 78,443,935 78,447,990 Zm00001d028164 GRMZM2G042171 sfp3 sulfate transporter3 Chr1 24,946,609 24,951,403 Zm00001d027749 GRMZM2G154211 sfp4 sulfate transporter4 Chr1 12,546,659 12,552,109 Zm00001d000204 GRMZM2G444801 sfp5 sulfate transporter5 B73V4_ctg129 15,011 19,789 Zm00001d043614 GRMZM2G158013 sfp6 sulfate transporter6 Chr3 205,241,184 205,245,939 Zm00001d005256 GRMZM2G068212 sfp7 sulfate transporter7 Chr2 165,995,200 165,998,280 Zm00001d002156 GRMZM2G106245 sgb101 silencing gene B101 Chr2 6,878,316 6,881,153 Zm00001d033620 GRMZM2G123159 sgb102 silencing gene B 102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,012,384 269,014,829 Zm00001d019148 GRMZM2G074082 sgo1 shugoshin centromeric cohesion1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to cDNA AY964185 | 63099688 Chr7 19,180,261 19,184,573 Zm00001d045042 GRMZM2G089713 sh1 shrunken1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 10,906,934 10,912,944 Zm00001d044129 GRMZM2G429899 sh2 shrunken2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,979,958 219,989,574 Zm00001d002661 GRMZM2G057131 shai1 shohai1 Gene model association inferred from similarity with B73 RefGen_v3 gene models nlp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 18,646,955 18,652,496 Zm00001d042840 GRMZM6G741210 shbp1 sedoheptulose bisphosphatase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: W21734 (v3) Chr3 181,638,640 181,643,200 Zm00001d014792 GRMZM2G399073 shpl1 shepherd-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT055135 Chr5 63,348,326 63,353,481 Zm00001d036425 GRMZM2G139073 si1 silky1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 87,897,599 87,902,270 Zm00001d019664 GRMZM2G462062 si605085g01 Chr7 48,965,520 48,977,670 Zm00001d028401 GRMZM2G149481 si606065d12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 33,647,427 33,651,594 Zm00001d051870 GRMZM2G082007 si683005e02 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 172,950,400 172,953,761 Zm00001d040023 GRMZM2G378452 si946003e12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 23,309,375 23,312,957 Zm00001d019230 GRMZM2G176175 sid1 sister of indeterminate spikelet1 from: FJ686697; ereb121 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr7 23,054,461 23,065,589 Zm00001d028585 GRMZM2G100086 sig1 Sigma70-like-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,036,028 40,038,476 Zm00001d024507 GRMZM2G006736 sig1A sigma factor 1A Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF058708 (chr 10 hit) Chr10 74,832,693 74,836,584 Zm00001d049494 GRMZM2G543629 sig1B sigma factor 1B Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 32,383,217 32,386,961 Zm00001d028585 GRMZM2G164084 sig2 Sigma70-like-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,036,028 40,038,476 Zm00001d049160 GRMZM2G143392 sig2A sigma factor sig2A Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF099110 Chr4 18,466,281 18,470,669 Zm00001d028585 GRMZM2G100086 sig2B sigma-like factor2B Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to cDNA AF099111 Chr1 40,036,028 40,038,476 Zm00001d028585 GRMZM2G003182 sig3 Sigma70-like-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,036,028 40,038,476 Zm00001d049494 GRMZM2G543629 sig5 Sigma70-like-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 32,383,217 32,386,961 Zm00001d012810 GRMZM2G144196 sig6 sigma-like factor6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542484 Chr5 684,894 687,528 Zm00001d039181 GRMZM5G830932 sig7 Sigma70-like-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 172,035,940 172,039,648 Zm00001d039194 GRMZM2G077436 sig8 Sigma70-like-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 172,321,981 172,324,231 Zm00001d024507 GRMZM2G006736 sig9 Sigma70-like-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 74,832,693 74,836,584 Zm00001d047349 GRMZM2G127141 simk1 salt-induced MAP kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of Dq422149 and Ay433815 to B73_v2 Chr9 127,177,134 127,181,687 Zm00001d035776 GRMZM2G319104 sin1 sin homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 48,040,384 48,053,188 Zm00001d008429 GRMZM2G334457 sin2 sin homolog2 Chr8 8,454,946 8,475,384 Zm00001d021901 GRMZM2G374971 sip1 stress-induced protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,699,754 165,700,437 Zm00001d038625 GRMZM2G090338 sir1 sulfite reductase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 161,162,525 161,167,432 Zm00001d047570 GRMZM2G161664 sirk1 sucrose-induced receptor kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Aquino et al., 2017 sequence alignment Chr9 135,941,110 135,946,433 Zm00001d002970 GRMZM2G021786 sk1 silkless ears1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Haywood et al., 2016 Chr2 28,350,907 28,355,040 Zm00001d002603 GRMZM2G106921 slac1 slow anion channel-associated1 Qi et al., 2018 Chr2 16,547,586 16,553,128 Zm00001d037816 GRMZM2G061469 slac2 slow anion channel-associated2 Chr6 138,740,453 138,748,540 Zm00001d041653 GRMZM2G447657 slac3 slow anion channel-associated3 Chr3 131,868,756 131,870,956 Zm00001d039314 GRMZM2G169951 slac4 slow anion channel-associated4 Chr3 1,477,923 1,480,449 Zm00001d017806 GRMZM2G009506 sln1 sister of liguleless narrow1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Moon et al, 2013 Chr5 207,369,388 207,372,376 Zm00001d051824 GRMZM2G140832 sly1 sec1/munc 18-like/SLY1 homolog1 Chr4 171,070,766 171,073,109 Zm00001d037784 GRMZM2G031311 sm1 salmon silks1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Casas et al., 2016 Chr6 137,680,490 137,684,176 Zm00001d006446 GRMZM2G180283 sm2 salmon silk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Casas et al., 2016 Chr2 208,457,127 208,458,693 Zm00001d033935 GRMZM2G418263 smg1 suppressor with morphogenetic defects on genitalia1 Chr1 279,077,286 279,107,944 Zm00001d011252 GRMZM2G136887 smh1 single myb histone1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 144,609,854 144,617,400 Zm00001d011692 smh3 single myb histone3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 158,905,685 158,906,986 Zm00001d043696 GRMZM2G108424 smh4 single myb histone4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 207,623,073 207,630,659 Zm00001d039750 GRMZM2G163291 smh5 single myb histone5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 13,772,095 13,776,752 Zm00001d013694 GRMZM2G095239 smh6 single myb histone6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 17,707,483 17,723,908 Zm00001d007100 GRMZM2G030148 smk1 small kernel1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li, et al., 2014 Chr2 222,255,509 222,256,819 Zm00001d053981 GRMZM2G023528 smk2 small kernel2 Yang et al., 2017 Chr4 244,568,059 244,571,526 Zm00001d047159 GRMZM2G019353 smr4 siamese-related4 Chr9 120,344,747 120,345,127 Zm00001d019139 GRMZM2G122810 smt1 sterol methyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 18,791,758 18,800,979 Zm00001d027548 GRMZM2G075701 smt2 sterol methyl transferase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,046,302 8,047,417 Zm00001d023239 GRMZM2G430745 smu2 suppressors of mec-8 and unc-52 (C.elegans) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 1,236,959 1,248,543 Zm00001d038745 GRMZM2G105401 snrk1a1 SNF1-related kinase alpha1-like1 Chr6 163,755,404 163,785,784 Zm00001d005108 GRMZM2G180704 snrk1a2 SNF1-related kinase alpha1-like2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 158,564,427 158,572,132 Zm00001d028946 GRMZM2G138814 snrk1a3 SNF1-related kinase alpha1-like3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 52,499,430 52,509,398 Zm00001d010662 GRMZM2G025459 snrkb1 SNF1-related protein kinase regulatory subunit beta1 Chr8 123,263,372 123,266,229 Zm00001d047220 GRMZM2G035809 snrkII1 SnRK2 serine threonine protein kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence EU676033 Chr9 122,717,205 122,721,608 Zm00001d013736 GRMZM2G066867 snrkII10 SnRK2 serine threonine kinase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence EU676041 Chr5 18,918,646 18,921,698 Zm00001d038326 GRMZM2G063961 snrkII11 SnRK2 serine threonine protein kinase 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence EU676042 Chr6 154,559,425 154,564,538 Zm00001d022179 GRMZM2G056732 snrkII2 SnRK2 serine threonine protein kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence EU676034 Chr7 171,984,109 171,989,937 Zm00001d029975 GRMZM2G180916 snrkII3 SnRK2 serine threonine protein kinase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence EU676035 Chr1 97,112,730 97,116,269 Zm00001d042695 GRMZM2G110922 snrkII4 SnRK2 serine threonine protein kinase 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence EU676036 Chr3 177,276,266 177,281,835 Zm00001d026690 GRMZM2G110908 snrkII5 SnRK2 serine threonine kinase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence EU676037 Chr10 150,050,330 150,051,860 Zm00001d050723 GRMZM2G130018 snrkII6 SnRK2 serine threonine protein kinase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100216941 Chr4 118,811,903 118,822,922 Zm00001d003659 GRMZM2G155593 snrkII7 SnRK2 serine threonine protein kinase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence EU676039 Chr2 52,839,413 52,844,416 Zm00001d034161 GRMZM2G138861 snrkII8 SnRK2 serine threonine protein kinase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from aligmnent to sequence EU676040 Chr1 285,417,447 285,425,538 Zm00001d033339 GRMZM2G081915 snrkII9 SnRK2 serine threonine protein kinase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence in BAC AC208970.1 (Huai et al., 2008) Chr1 259,579,890 259,583,075 Zm00001d031617 GRMZM2G114739 so1 sulfite oxidase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to FJ436404 and AY104501 Chr1 196,224,574 196,228,047 Zm00001d022505 GRMZM2G025992 sod2 superoxide dismutase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 179,056,206 179,061,245 Zm00001d037859 GRMZM2G059991 sod3 superoxide dismutase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 140,001,946 140,006,130 Zm00001d029170 GRMZM2G169890 sod4 superoxide dismutase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 60,930,751 60,934,311 Zm00001d047479 GRMZM2G058522 sod9 superoxide dismutase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 131,494,599 131,498,207 Zm00001d031727 GRMZM2G175423 sodh1 sorbitol dehydrogenase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU963336 Chr1 199,715,758 199,718,643 Zm00001d044069 GRMZM2G025222 spi1 sparse inflorescence1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 218,287,295 218,289,461 Zm00001d016783 GRMZM2G000278 spk1 stress-induced protein kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT055373 Chr5 175,764,979 175,770,061 Zm00001d013262 GRMZM2G129913 spo1 topoisomerase-like enzyme1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al, 2014 Chr5 7,372,367 7,382,139 Zm00001d049550 GRMZM5G890820 spo2 topoisomerase-like enzyme2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al, 2014 Chr4 34,374,982 34,377,834 Zm00001d028705 GRMZM2G052581 spo3 topoisomerase-like enzyme3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhang et al, 2014 Chr1 43,725,600 43,726,910 Zm00001d010523 GRMZM2G055489 spp1 sucrose-phosphatase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 119,143,166 119,149,436 Zm00001d024821 GRMZM2G097641 spp2 sucrose-phosphatase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr10 89,613,645 89,616,637 Zm00001d027293 GRMZM2G060296 spr1 signal recognition particle receptor homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,026,825 2,034,154 Zm00001d037422 GRMZM2G046576 spr9 signal recognition particle protein subunit 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Y10117 Chr6 125,049,232 125,057,616 Zm00001d012036 GRMZM5G875238 sps1 sucrose phosphate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 166,917,606 166,923,260 Zm00001d042353 GRMZM2G140107 sps2 sucrose phosphate synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T26951 (chr 3 hit) Chr3 162,856,701 162,862,617 Zm00001d013048 GRMZM2G108225 sqs1 squalene synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From: ENTREZ GENE 541614 Chr5 3,760,185 3,771,088 Zm00001d034516 GRMZM2G029396 sqsh1 squalene synthase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 295,472,178 295,480,964 Zm00001d007745 AC217293.3_FG007 srk1 S-receptor kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT060988 Chr2 238,606,921 238,613,493 Zm00001d028307 GRMZM2G122543 sro1 similar to RCD one1 Chr1 29,957,661 29,960,895 Zm00001d030110 GRMZM5G866843 sro2 similar to RCD one2 Chr1 106,378,899 106,383,615 Zm00001d052295 GRMZM2G011469 sro3 similar to RCD one3 Chr4 186,310,057 186,316,348 Zm00001d012821 GRMZM2G072894 sro4 similar to RCD one4 Chr5 898,964 904,115 Zm00001d014423 GRMZM2G145236 sro5 similar to RCD one5 Chr5 46,040,813 46,045,477 Zm00001d047993 GRMZM2G177878 sro6 similar to RCD one6 Chr9 147,425,381 147,428,673 Zm00001d044172 GRMZM2G105019 srph1 SGT1 disease resistance protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from NM_001155651 in Wang et al 2014 Chr3 221,071,103 221,078,032 Zm00001d032040 GRMZM2G042407 srs1 SHI/STY (SRS)-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 210,206,509 210,211,370 Zm00001d006209 GRMZM2G080295 srs2 SHI/STY (SRS)-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 201,896,427 201,897,959 Zm00001d053208 GRMZM2G017606 srs3 SHI/STY (SRS)-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 220,087,908 220,093,065 Zm00001d014762 GRMZM2G097683 srs4 SHI/STY (SRS)-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 61,966,310 61,967,872 Zm00001d036426 GRMZM2G108798 srs5 SHI/STY (SRS)-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 87,953,855 87,955,348 Zm00001d038081 GRMZM2G450459 srs6 SHI/STY (SRS)-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,117,119 147,118,645 Zm00001d021285 GRMZM2G135783 srs7 SHI/STY (SRS)-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 147,853,086 147,854,863 Zm00001d021290 GRMZM2G179021 srs8 SHI/STY (SRS)-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 148,061,214 148,062,014 Zm00001d045261 GRMZM2G129451 ss1 starch synthase I Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 17,401,822 17,412,594 Zm00001d010821 GRMZM2G044744 ss4 starch synthase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 128,734,662 128,743,577 Zm00001d051976 GRMZM2G130043 ss5 starch synthase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Liu et al., 2015 Chr4 175,714,876 175,730,530 Zm00001d053643 GRMZM2G090935 ssp1 seed specific protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT063485 Chr4 238,099,957 238,103,666 Zm00001d052595 GRMZM2G098520 ssu1 ribulose bisphosphate carboxylase small subunit1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 194,257,728 194,258,862 Zm00001d004894 GRMZM2G113033 ssu2 ribulose bisphosphate carboxylase small subunit2 Classical Gene Chr2 147,269,761 147,270,804 Zm00001d009162 GRMZM2G047732 star1 low confidence Chr8 40,272,425 40,272,496 Zm00001d045054 GRMZM2G177098 stc1 sesquiterpene cyclase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of B73_v2 assembly to cDNA sequence accession AF296122 (Aug 2012 M Schaeffer) Chr9 11,188,093 11,192,433 Zm00001d045056 GRMZM2G165433 stk1 serine threonine kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 11,221,592 11,224,808 Zm00001d003377 GRMZM2G179268 stk2 serine-threonine kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: ABF81696 Chr2 42,140,112 42,141,719 Zm00001d052067 GRMZM2G301647 stk3 serine-threonine kinase3 Wang et al., 2017 Chr4 178,304,940 178,308,282 Zm00001d026267 GRMZM2G156013 stk4 serine-threonine kinase4 Chr10 142,376,205 142,380,294 Zm00001d024540 GRMZM2G023073 stm1 stomatin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 77,144,191 77,149,860 Zm00001d009669 GRMZM2G097768 stp1 sugar transport1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 75,146,233 75,152,432 Zm00001d049753 GRMZM2G138060 su1 sugary1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 43,110,569 43,119,167 Zm00001d037234 GRMZM2G348551 su2 sugary2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 117,124,065 117,128,209 Zm00001d038121 GRMZM2G090905 su4 sugary4 Gene model association inferred from similarity with B73 RefGen_v3 gene models From Genbank sequence homology Chr6 148,612,409 148,616,192 Zm00001d018758 GRMZM2G064799 sudh1 succinate dehydrogenase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 4,402,578 4,407,434 Zm00001d013526 GRMZM2G076524 sudh10 succinate dehydrogenase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 13,610,216 13,614,675 GRMZM2G306945 sudh11 succinate dehydrogenase11 Chr1 64,881,015 64,884,264 Zm00001d033554 GRMZM2G146965 sudh12 succinate dehydrogenase12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 267,003,826 267,007,846 Zm00001d049649 GRMZM2G302259 sudh2 succinate dehydrogenase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT037104 (chr 4 hit) Chr4 38,706,344 38,709,739 Zm00001d008855 GRMZM2G056912 sudh3 succinate dehydrogenase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 22,739,651 22,740,658 Zm00001d007966 GRMZM2G079888 sudh4 succinate dehydrogenase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 244,311,542 244,316,936 Zm00001d047501 GRMZM2G109271 sudh5 succinate dehydrogenase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 132,763,532 132,766,871 Zm00001d025385 GRMZM2G398876 sudh6 succinate dehydrogenase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 116,620,582 116,622,211 Zm00001d035136 GRMZM2G134134 sudh7 succinate dehydrogenase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 6,620,118 6,623,924 Zm00001d045148 GRMZM2G023760 sudh8 succinate dehydrogenase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 14,306,889 14,307,320 Zm00001d038502 GRMZM2G160685 sudh9 succinate dehydrogenase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 158,757,903 158,759,244 Zm00001d044138 GRMZM2G105604 sum1 siroheme uroporphyrinogen methyltransferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: D83391 Chr3 220,166,617 220,170,536 Zm00001d012042 GRMZM2G053898 sumo1a small ubiquitin-related modifier1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Augustine et al, 2016 Chr8 167,077,414 167,081,392 Zm00001d012044 GRMZM2G082390 sumo1b small ubiquitin-related modifier1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Augustine et al, 2016 Chr8 167,187,771 167,190,749 Zm00001d021886 GRMZM2G305196 sumo2 small ubiquitin-related modifier2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Augustine et al, 2016 Chr7 165,358,497 165,358,697 Zm00001d011308 GRMZM2G073404 sumov1 small ubiquitin-related modifier-variant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Augustine et al, 2016 Chr8 146,317,656 146,322,089 Zm00001d015450 GRMZM2G109818 sun1 SUN domain protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 90,962,311 90,968,591 Zm00001d040331 GRMZM2G440614 sun2 SUN domain protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment of sequence accession BT055722 (Apr 2011) Chr3 38,375,080 38,380,515 Zm00001d012240 GRMZM2G005483 sun4 SUN domain protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 170,777,809 170,781,884 Zm00001d011277 AC194341.4_FG003 sun5 SUN domain protein5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 145,550,689 145,553,038 Zm00001d047253 GRMZM2G152908 sus1 sucrose synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr9 124,178,172 124,184,872 Zm00001d029091 GRMZM2G318780 sus2 sucrose synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY124703 Chr1 57,485,976 57,493,258 Zm00001d027854 GRMZM2G034302 sut1 sucrose transporter1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73_v2 alignment to cDNA AB008464 Chr1 15,301,583 15,306,925 Zm00001d041192 GRMZM2G307561 sut2 sucrose transporter2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY603492 Chr3 104,338,411 104,343,309 Zm00001d033011 GRMZM2G083248 sut3 sucrose transporter3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr1 246,870,441 246,874,115 Zm00001d018527 GRMZM2G145107 sut4 sucrose transporter4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY581895 Chr5 222,512,491 222,516,983 Zm00001d016938 GRMZM2G081589 sut5 sucrose transporter5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr5 180,472,917 180,476,181 Zm00001d050873 GRMZM2G106741 sut6 sucrose transporter6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr4 127,915,099 127,918,352 Zm00001d048311 GRMZM2G087901 sut7 sucrose transporter7 Gene model association inferred from similarity with B73 RefGen_v3 gene models blast match to AY106212 on 9L " Sucrose transporter" Chr9 154,421,758 154,426,112 Zm00001d031647 GRMZM2G368827 sweet11 sugars will eventually be exported transporter11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr1 197,308,955 197,311,791 Zm00001d029135 GRMZM2G133322 sweet12a sugars will eventually be exported transporter12a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr1 59,948,045 59,951,123 Zm00001d047487 GRMZM2G099609 sweet12b sugars will eventually be exported transporter12b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr9 131,985,732 131,987,306 Zm00001d023677 GRMZM2G173669 sweet13a sugars will eventually be exported transporter13a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr10 15,030,181 15,032,801 Zm00001d023673 GRMZM2G021706 sweet13b sugars will eventually be exported transporter13b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr10 14,795,157 14,798,022 Zm00001d041067 GRMZM2G179349 sweet13c sugars will eventually be exported transporter13c Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr3 94,632,377 94,634,331 Zm00001d007365 GRMZM2G094955 sweet14a sugars will eventually be exported transporter14a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr2 229,754,222 229,756,856 Zm00001d049252 GRMZM2G015976 sweet14b sugars will eventually be exported transporter14b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr4 22,932,092 22,935,601 Zm00001d050577 GRMZM2G168365 sweet15a sugars will eventually be exported transporter15a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr4 101,826,608 101,828,504 Zm00001d016590 GRMZM5G872392 sweet15b sugars will eventually be exported transporter15b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr5 168,752,444 168,755,159 Zm00001d029098 GRMZM2G107597 sweet16 sugars will eventually be exported transporter16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr1 57,988,733 57,991,597 Zm00001d040656 GRMZM2G106462 sweet17a sugars will eventually be exported transporter17a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr3 56,766,328 56,774,152 Zm00001d009071 GRMZM2G111926 sweet17b sugars will eventually be exported transporter17b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr8 34,288,986 34,294,478 Zm00001d000222 GRMZM2G039365 sweet1a sugars will eventually be exported transporter1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 B73V4_ctg26 144,186 147,832 Zm00001d038226 GRMZM2G153358 sweet1b sugars will eventually be exported transporter1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr6 151,988,250 151,991,045 Zm00001d009365 GRMZM2G324903 sweet2 sugars will eventually be exported transporter2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr8 60,083,986 60,086,634 Zm00001d010440 GRMZM2G179679 sweet3a sugars will eventually be exported transporter3a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr8 115,240,665 115,242,366 Zm00001d039347 GRMZM2G060974 sweet3b sugars will eventually be exported transporter3b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr3 2,201,670 2,203,002 Zm00001d015905 GRMZM2G000812 sweet4a sugars will eventually be exported transporter4a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr5 130,027,454 130,030,346 Zm00001d015914 GRMZM2G144581 sweet4b sugars will eventually be exported transporter4b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr5 130,947,371 130,950,710 Zm00001d015912 GRMZM2G137954 sweet4c sugars will eventually be exported transporter4c Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr5 130,787,030 130,789,864 Zm00001d044421 GRMZM2G157675 sweet6a sugars will eventually be exported transporter6a Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr3 227,515,476 227,518,586 Zm00001d011299 GRMZM2G416965 sweet6b sugars will eventually be exported transporter6b Gene model association inferred from similarity with B73 RefGen_v3 gene models Sosso et al., 2015 Chr8 146,128,641 146,131,503 Zm00001d015985 GRMZM2G009785 sxd1 sucrose export defective1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 136,805,708 136,822,194 Zm00001d037346 GRMZM2G467799 syd1 splayed ATPase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 122,234,832 122,284,355 Zm00001d017179 GRMZM2G081955 tab2 translation chloroplast psaB mRNA2 homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Belcher et al., 2015 Chr5 188,141,861 188,144,082 Zm00001d006184 GRMZM2G447987 tac1 tiller angle control1 Chr2 200,972,420 200,977,073 Zm00001d007141 tacs1 terminal acidic SANT 1 Chr2 223,272,401 223,275,423 Zm00001d042879 GRMZM2G002276 taf1 transcription associated factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr3 182,649,721 182,654,210 Zm00001d038060 GRMZM2G039113 tan1 tangled1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 146,619,927 146,621,546 Zm00001d014785 GRMZM2G075844 tap1 translocon-associated protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 63,016,459 63,020,299 Zm00001d037498 GRMZM2G127160 tar1 tryptophan aminotransferase related1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to sequence EU872320 (June 2012 MLS) Chr6 127,318,662 127,321,705 Zm00001d039691 GRMZM2G066345 tar2 tryptophan aminotransferase related2 Chr3 11,918,669 11,922,644 Zm00001d037674 GRMZM2G141810 tar3 tryptophan aminotransferase related3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Bernardi et al 2012 Chr6 133,714,246 133,717,685 Zm00001d007462 GRMZM2G139813 tat1 tyrosine aminotransferase homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 232,247,283 232,255,516 Zm00001d033673 AC233950.1_FG002 tb1 teosinte branched1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 270,553,676 270,554,776 Zm00001d033472 GRMZM2G149238 tbp1 TATA-binding protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: L13301 Chr1 263,622,481 263,627,725 Zm00001d013631 GRMZM2G161418 tbp2 TATA-binding protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 15,866,934 15,871,877 Zm00001d011918 GRMZM2G118515 tcp1 thiamine diphosphate carrier protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Frelin et al 2012 Chr8 164,544,656 164,552,085 Zm00001d042213 GRMZM2G124911 tcp2 thiamine diphosphate carrier protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Frelin et al 2012 Chr3 156,286,694 156,310,438 Zm00001d037221 GRMZM2G142751 tcptf10 TCP-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,436,142 116,437,281 Zm00001d032217 GRMZM2G166687 tcptf11 TCP-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 217,455,034 217,455,756 Zm00001d023565 GRMZM2G093895 tcptf12 TCP-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 10,313,565 10,314,782 Zm00001d048591 GRMZM2G359599 tcptf13 TCP-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 821,353 823,207 Zm00001d025896 GRMZM2G465091 tcptf14 TCP-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 133,245,638 133,246,261 Zm00001d050389 GRMZM2G060319 tcptf15 TCP-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 85,370,757 85,371,581 Zm00001d017350 GRMZM2G178603 tcptf16 TCP-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 193,493,247 193,493,909 Zm00001d025250 GRMZM2G458087 tcptf17 TCP-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 111,056,632 111,058,362 Zm00001d020433 GRMZM2G064628 tcptf18 TCP-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 114,008,489 114,009,250 Zm00001d006165 AC199782.5_FG003 tcptf19 TCP-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 200,270,198 200,271,190 Zm00001d053020 GRMZM2G003944 tcptf2 TCP-transcription factor 2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 209,499,482 209,500,645 Zm00001d011985 GRMZM2G034638 tcptf20 TCP-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 165,936,679 165,937,626 Zm00001d031725 GRMZM2G107031 tcptf21 TCP-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,651,976 199,653,028 Zm00001d051154 GRMZM2G135461 tcptf22 TCP-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 146,257,824 146,259,689 Zm00001d038683 GRMZM2G120151 tcptf23 TCP-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,529,258 162,530,154 Zm00001d008919 GRMZM2G015037 tcptf24 TCP-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 25,254,637 25,255,914 Zm00001d051216 GRMZM2G078077 tcptf25 TCP-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 148,970,275 148,970,931 Zm00001d018045 GRMZM2G077755 tcptf26 TCP-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,792,080 212,793,282 Zm00001d007432 GRMZM2G414114 tcptf27 TCP-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 231,608,233 231,608,635 GRMZM2G062711 tcptf28 TCP-transcription factor 28 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 55,947,182 55,947,871 Zm00001d012725 GRMZM2G148022 tcptf29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 179,214,402 179,228,713 Zm00001d043368 GRMZM2G166946 tcptf30 TCP-transcription factor 30 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 197,856,616 197,857,467 Zm00001d041866 GRMZM2G089638 tcptf31 TCP-transcription factor 31 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 141,608,609 141,609,859 Zm00001d035482 GRMZM2G031905 tcptf32 TCP-transcription factor 32 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 28,896,924 28,897,511 Zm00001d039371 GRMZM2G589470 tcptf33 TCP-transcription factor 33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 2,709,285 2,712,754 Zm00001d002818 AC234521.1_FG006 tcptf34 TCP-transcription factor 34 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,555,296 23,556,423 Zm00001d048674 GRMZM2G055024 tcptf35 TCP-transcription factor 35 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 3,124,349 3,125,476 Zm00001d025295 GRMZM2G424261 tcptf36 TCP-transcription factor 36 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 113,006,222 113,009,023 Zm00001d005763 GRMZM2G088440 tcptf37 TCP-transcription factor 37 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 187,123,029 187,124,514 Zm00001d022256 GRMZM2G180568 tcptf38 TCP-transcription factor 38 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,754,099 173,755,070 Zm00001d049645 GRMZM2G170232 tcptf39 TCP-transcription factor 39 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 38,599,389 38,600,985 Zm00001d018530 GRMZM2G445944 tcptf4 TCP-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 222,531,797 222,532,420 Zm00001d025033 GRMZM2G096610 tcptf40 TCP-transcription factor 40 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 100,593,766 100,594,296 Zm00001d004791 GRMZM2G416524 tcptf41 TCP-transcription factor 41 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 139,598,222 139,598,940 Zm00001d031597 AC213524.3_FG003 tcptf42 TCP-transcription factor 42 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,867,646 195,869,138 Zm00001d007868 GRMZM2G020805 tcptf43 TCP-transcription factor 43 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 241,313,813 241,315,135 Zm00001d013119 GRMZM2G089361 tcptf44 TCP-transcription factor 44 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,078,404 5,079,549 Zm00001d034353 GRMZM2G115516 tcptf5 TCP-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 290,438,168 290,439,328 Zm00001d013467 AC190734.2_FG003 tcptf6 TCP-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 12,293,289 12,294,368 Zm00001d010730 GRMZM2G035944 tcptf7 TCP-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 126,238,922 126,239,749 Zm00001d042305 GRMZM2G092214 tcptf8 TCP-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 160,028,234 160,029,208 Zm00001d044836 GRMZM2G113888 tcptf9 TCP-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 4,608,923 4,609,996 Zm00001d050200 GRMZM2G016145 tcrr1 transfer cell response regulator1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 73,314,108 73,315,352 Zm00001d014954 GRMZM2G075624 tct1 translationally controlled tumor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT068707 Chr5 69,765,432 69,768,123 Zm00001d014793 GRMZM2G300133 td1 thick tassel dwarf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models From sequence in Fig 4 of Bommert et al., 2005 Chr5 63,456,839 63,460,120 Zm00001d040798 GRMZM2G055458 tdpk1 thiamin diphosphokinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guan et al., 2014 Chr3 66,473,780 66,485,780 Zm00001d037916 GRMZM5G864815 tdpk2 thiamin diphosphokinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guan et al., 2014 Chr6 141,931,015 141,933,513 Zm00001d039135 GRMZM2G321778 tdy1 tie-dyed1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from B73_v2 alignment to genomic sequence FJ376984 Chr6 170,789,131 170,789,949 Zm00001d018565 GRMZM5G840560 tdy2 tie-dyed2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Slewinski et al., 2012; homology to sb04g038510 Chr5 223,299,688 223,305,883 Zm00001d042445 GRMZM2G085113 te1 terminal ear1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 167,821,561 167,825,000 Zm00001d017114 GRMZM2G144166 tel2 telomere maintenance2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,786,433 185,793,791 Zm00001d049888 GRMZM2G078283 tena1 thiaminase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guan et al., 2014 Chr4 50,687,439 50,693,090 Zm00001d031854 GRMZM2G148896 tena2 thiaminase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guan et al., 2014 Chr1 204,236,527 204,241,415 Zm00001d047640 GRMZM2G080501 tena3 thiaminase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guan et al, 2014 Chr9 137,872,908 137,874,613 Zm00001d048180 GRMZM2G017831 tfIIB1 transcription initiation factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 151,800,917 151,803,916 Zm00001d049822 GRMZM2G101511 tga1 teosinte glume architecture1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 46,350,597 46,355,118 Zm00001d028653 GRMZM2G044027 tgd1 dTDP-glucose dehydratase homolog csu219 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 41,833,738 41,838,204 Zm00001d025689 GRMZM2G025054 tgz15a transglutaminase15a Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ421525 (chr 10 hit) Chr10 126,291,063 126,294,862 Zm00001d003291 GRMZM2G045005 tgz21 transglutaminase21 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ488103 Chr2 38,955,003 38,958,609 Zm00001d004707 GRMZM2G090086 tha1 thylakoid assembly1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from partial cDNA U71123 Chr2 132,433,054 132,465,319 Zm00001d033317 GRMZM2G472651 tha4 thylakoid assembly4 Gene model association inferred from similarity with B73 RefGen_v3 gene models alignment of cDNA AF145755 | 4877983 (v2 Jul 2011) Chr1 258,850,341 258,853,608 Zm00001d045144 GRMZM2G300408 tha5 thylakoid assembly5 Gene model association inferred from similarity with B73 RefGen_v3 gene models provided by A Barkan (2010) Chr9 14,222,619 14,223,173 Zm00001d008641 AC217965.2_FG012 tha8 thylakoid assembly8 Gene model association inferred from similarity with B73 RefGen_v3 gene models From: AY530730 Chr8 15,544,170 15,545,233 Zm00001d013706 GRMZM2G128454 tha9 thylakoid assembly 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to sequence AF145756 Chr5 18,187,967 18,195,207 Zm00001d011183 GRMZM2G018375 thi1 thiamine biosynthesis1 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence U17350 on B73_v2 reference genome Chr8 142,217,718 142,219,220 Zm00001d044228 GRMZM2G074097 thi2 thiamine biosynthesis2 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to sequence U17351 on ref. genome B73_v2 (MLS Jan 2013) Chr3 222,461,984 222,463,639 Zm00001d041829 GRMZM2G401934 thi3 thiamine synthesis3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence AM167973 alignment to B73_v2 Chr3 139,490,055 139,496,394 Zm00001d033383 GRMZM2G027663 thic1 hydroxymethylpyrimidine phosphate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Guan et al., 2014 Chr1 261,132,562 261,138,355 Zm00001d009264 GRMZM2G094558 thim1 thiamin thiazole kinase M1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Yazdani et al., 2013 Chr8 48,669,883 48,672,784 Zm00001d031212 GRMZM2G085474 thl1 thiolase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 182,379,167 182,384,473 Zm00001d027400 GRMZM2G473389 tho1 THO complex subunit 7B-like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,405,004 4,406,685 Zm00001d043780 GRMZM2G050570 thr1 threonine synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 210,000,302 210,002,017 Zm00001d038994 GRMZM2G157219 thx1 Trihelix-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,356,470 168,357,501 Zm00001d026245 GRMZM2G415229 thx10 Trihelix-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 141,743,929 141,746,414 Zm00001d002801 GRMZM2G016649 thx12 Trihelix-transcription factor 12 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,082,802 23,086,615 Zm00001d015605 GRMZM2G134439 thx13 Trihelix-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 100,769,867 100,773,584 Zm00001d011571 GRMZM2G163157 thx14 Trihelix-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,708,719 154,709,666 Zm00001d003549 GRMZM2G021831 thx15 Trihelix-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 47,683,309 47,684,466 Zm00001d051316 GRMZM2G063203 thx16 Trihelix-transcription factor 16 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 153,362,817 153,366,616 Zm00001d043902 GRMZM2G080583 thx17 Trihelix-transcription factor 17 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 213,345,213 213,346,432 Zm00001d027335 GRMZM2G314660 thx18 Trihelix-transcription factor 18 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 3,172,313 3,176,736 Zm00001d013849 GRMZM2G414159 thx19 Trihelix-transcription factor 19 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 22,609,420 22,613,930 Zm00001d025514 GRMZM2G392168 thx2 Trihelix-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,969,085 120,970,263 Zm00001d017420 GRMZM2G169580 thx20 Trihelix-transcription factor 20 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 195,392,064 195,395,934 Zm00001d054080 GRMZM2G037128 thx21 Trihelix-transcription factor 21 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 246,034,945 246,038,140 Zm00001d014938 GRMZM2G111760 thx22 Trihelix-transcription factor 22 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 69,105,228 69,108,023 Zm00001d002424 GRMZM2G156348 thx23 Trihelix-transcription factor 23 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,400,461 12,403,506 Zm00001d016876 GRMZM2G380094 thx24 Trihelix-transcription factor 24 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 179,111,776 179,112,984 Zm00001d025720 GRMZM2G047370 thx25 Trihelix-transcription factor 25 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 127,515,419 127,518,791 Zm00001d003836 GRMZM2G002978 thx26 Trihelix-transcription factor 26 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 61,532,097 61,537,459 Zm00001d042917 AC209784.3_FG011 thx27 Trihelix-transcription factor 27 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 183,872,097 183,874,894 Zm00001d000045 GRMZM2G428470 thx28 Trihelix-transcription factor 28 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) B73V4_ctg182 953,004 953,960 Zm00001d047589 GRMZM2G326783 thx29 Trihelix-transcription factor 29 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 136,494,931 136,499,410 Zm00001d052798 GRMZM5G850092 thx3 Trihelix-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 201,305,242 201,306,120 Zm00001d029974 GRMZM2G481163 thx4 Trihelix-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 97,104,476 97,105,441 Zm00001d035457 GRMZM2G016637 thx5 Trihelix-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 27,101,237 27,102,244 Zm00001d011730 GRMZM2G339957 thx6 Trihelix-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 160,093,938 160,094,990 Zm00001d030350 GRMZM2G023119 thx7 Trihelix-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 124,513,774 124,516,163 Zm00001d031266 GRMZM2G379179 thx8 Trihelix-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 184,358,938 184,359,897 Zm00001d031391 GRMZM2G037493 thx9 Trihelix-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,647,320 188,650,029 Zm00001d006274 GRMZM2G042712 TIDP2961 Chr2 203,395,420 203,402,757 Zm00001d038330 GRMZM2G110141 TIDP2966 Chr6 154,712,695 154,715,814 Zm00001d025180 GRMZM2G022308 TIDP3000 Chr10 107,999,211 108,003,428 Zm00001d024624 GRMZM2G134756 TIDP3108 Chr10 80,769,666 80,774,901 Zm00001d025274 GRMZM2G149543 TIDP3243 Chr10 112,165,803 112,168,114 Zm00001d026586 GRMZM2G150248 TIDP3366 Chr10 148,397,982 148,402,287 Zm00001d022085 GRMZM2G045287 TIDP3389 Chr7 169,769,393 169,772,957 Zm00001d023582 GRMZM2G014397 TIDP3433 Chr10 10,762,553 10,767,953 Zm00001d023762 GRMZM2G115579 TIDP3522 Chr10 19,189,183 19,193,087 Zm00001d033480 GRMZM2G165747 TIDP3524 Chr1 263,882,342 263,887,652 Zm00001d023984 GRMZM2G700208 TIDP3581 Chr10 34,278,519 34,282,752 Zm00001d024744 GRMZM2G082522 TIDP3651 Chr10 85,872,249 85,877,606 Zm00001d023604 GRMZM2G122053 TIDP3704 Chr10 11,808,463 11,810,324 Zm00001d023933 GRMZM2G420407 TIDP3714 Chr10 29,995,808 29,996,959 Zm00001d045476 TIDP9202 Chr9 23,630,223 23,631,293 Zm00001d021668 GRMZM5G835323 tif1 translation initiation factor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 159,573,273 159,576,103 Zm00001d022042 GRMZM2G144030 tif5A eukaryotic translation initiation factor 5A Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 168,491,796 168,494,907 Zm00001d027652 tip1 tonoplast intrinsic protein1 Chr1 10,150,836 10,152,891 Zm00001d011778 GRMZM2G168439 tip2 tonoplast intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF326500 Chr8 161,412,063 161,413,479 Zm00001d051362 GRMZM2G027098 tip2a tonoplast intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene 541894 Chr4 155,984,860 155,986,408 Zm00001d017485 GRMZM2G056908 tip2b tonoplast intrinsic protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene 541895 Chr5 197,280,407 197,281,892 Zm00001d013956 GRMZM2G305446 tip3a tonoplast intrinsic protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY104541 Chr5 26,132,024 26,133,292 Zm00001d032610 GRMZM2G103983 tip3b tonoplast intrinsic protein3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF342809 Chr1 232,015,864 232,017,318 Zm00001d037779 GRMZM2G103945 tip4a tonoplast intrinsic protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF326505 Chr6 137,396,807 137,399,127 Zm00001d010410 GRMZM2G108273 tip4b tonoplast intrinsic protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF326506 Chr8 113,391,975 113,394,577 Zm00001d039713 GRMZM2G146627 tip4c tonoplast intrinsic protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF326507 Chr3 12,824,022 12,826,924 Zm00001d039293 GRMZM2G093090 tip4d tonoplast intrinsic protein4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AF326508 Chr3 1,167,223 1,168,320 Zm00001d026178 GRMZM2G125023 tip5 tonoplast intrinsic protein5 Gene model association inferred from Enteez Gene 541900 from: AF326509 Chr10 140,378,693 140,379,967 Zm00001d045451 GRMZM2G033208 tk1 transketolase 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU942796 Chr9 22,640,913 22,645,485 Zm00008a009742 tla1 transparent leaf area1 PH207 v1 chr2 214,970,306 214,971,076 Zm00001d034018 GRMZM2G016671 tlk1 tousled-like protein kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 281,251,739 281,283,764 Zm00001d013267 GRMZM2G172132 tlk2 tousled-like protein kinase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 7,487,430 7,504,034 Zm00001d032461 GRMZM2G176209 tls1 tasselless1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Leonard, A et al. 2014 Chr1 227,449,316 227,453,079 Zm00001d037386 GRMZM2G036564 tm20 transmembrane protein20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 124,045,008 124,049,689 Zm00001d053351 GRMZM2G147727 tms5 thermosensitive male-sterile5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence in Li et al., 2017 Chr4 227,178,840 227,181,299 Zm00001d051114 GRMZM2G020081 toc1 timing of cab expression1 Chr4 143,867,613 143,870,730 Zm00001d017241 GRMZM2G148453 toc2 timing of cab expression2 Chr5 190,060,998 190,063,941 Zm00001d047965 GRMZM2G159777 toc34 translocon at outer membrane of chloroplast34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 146,540,635 146,546,312 Zm00001d028373 GRMZM2G157157 toc35 translocon of outer membrane of chloroplast35 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ271049 Chr1 32,472,096 32,478,283 Zm00001d051644 AC185226.4_FG001 tola1 tola protein homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: T15269 (chr hit) Chr4 165,589,428 165,612,542 Zm00001d005001 GRMZM2G141081 tom3 transporter of mugineic acid3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Nozoye et al, 2015 Chr2 153,144,332 153,148,743 Zm00001d037950 GRMZM2G349554 tor1 target of rapamycin1 Chr6 143,301,519 143,339,329 Zm00001d021885 GRMZM2G305211 tpi1 triose phosphate isomerase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: L00371 (chr 7 hit) Chr7 165,356,591 165,357,406 Zm00001d006221 GRMZM2G002807 tpi2 triose phosphate isomerase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 202,188,330 202,192,176 Zm00001d008619 GRMZM2G018177 tpi3 triose phosphate isomerase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU959275 Chr8 14,786,063 14,790,046 Zm00001d039865 GRMZM2G030784 tpi4 triose phosphate isomerase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models From: Entrez Gene 100272481 Chr3 17,163,334 17,167,131 Zm00001d012407 GRMZM2G146206 tpi5 triose phosphate isomerase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models by homology and map location Chr8 173,978,431 173,987,430 Zm00001d040279 GRMZM2G316967 tpl1 topless-related1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr3 35,510,649 35,520,277 Zm00001d028481 GRMZM2G030422 tpl2 topless-related2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr1 36,474,424 36,485,449 Zm00001d002351 GRMZM2G049538 tps1 terpene synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AF529266 Chr2 10,715,684 10,724,692 Zm00001d024486 GRMZM2G179092 tps10 terpene synthase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY928078 Chr10 73,708,902 73,712,703 Zm00001d024210 GRMZM2G127087 tps11 terpene synthase11 From EU716166 and NCBI 103641097 from cDNA alignment EU942943 - there are 2 location on B73 v2 assembly, very close to each other (M Schaeffer Aug 2012) Chr10 56,611,720 56,614,911 Zm00001d004509 GRMZM2G010356 tps17 terpene synthase17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 115,859,005 115,861,839 Zm00001d015053 GRMZM2G046615 tps2 terpene synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY928081 Chr5 73,220,250 73,223,078 Zm00001d047440 GRMZM2G011151 tps21 terpene synthase21 Ding et al., 2017 Chr9 130,209,326 130,210,515 Zm00001d024234 GRMZM2G127336 tps23 terpene synthase23 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to cDAN EU259633 on B73_v2 assembly (Aug 2012, M Schaeffer) Chr10 58,548,375 58,557,438 Zm00001d037092 GRMZM2G030583 tps26 terpene synthase26 Gene model association inferred from similarity with B73 RefGen_v3 gene models aligns to cDNA GenBank accession EF599328 Chr6 111,878,360 111,883,069 Zm00001d015054 GRMZM2G064406 tps3 terpene synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from NM_001112385 Chr5 73,448,283 73,451,482 Zm00001d024478 GRMZM2G117319 tps4 terpene synthase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY518310 Chr10 73,138,059 73,141,408 Zm00001d024481 GRMZM2G074309 tps5 terpene synthase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from GenBank AY518311 match Chr10 73,442,460 73,446,118 Zm00001d024207 GRMZM2G127087 tps6 terpene synthase6 From AY518315 and NCBI 542688 from AY518315 Chr10 56,446,155 56,449,468 Zm00001d032230 AC217050.4_FG007 tps7 terpene synthase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY518316 Chr1 218,044,713 218,047,096 Zm00001d029195 GRMZM2G038153 tps8 terpene synthase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY928080 Chr1 61,777,103 61,783,441 Zm00001d024477 GRMZM2G465812 tps9 terpene synthase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models from AY518317 Chr10 72,975,072 72,977,686 Zm00001d029654 GRMZM2G162690 tre1 trehalase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr1 81,612,748 81,617,458 Zm00001d038653 GRMZM2G424053 trh1 thioredoxin h homolog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 161,892,150 161,896,354 Zm00001d019034 GRMZM2G144653 trh2 thioredoxin h homolog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AJ890021 Chr7 13,647,277 13,649,821 Zm00001d044247 GRMZM2G079089 trh3 thioredoxin h homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT042328 Chr3 223,001,191 223,001,980 Zm00001d037499 GRMZM2G066612 trh4 thioredoxin h homolog4 Chr6 127,482,891 127,494,100 Zm00001d023707 GRMZM2G181258 trm1 thioredoxin M1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,408,714 16,409,698 Zm00001d041804 GRMZM2G358009 trm2 thioredoxin M2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 138,831,576 138,832,497 Zm00001d003667 GRMZM2G131202 trm3 thioredoxin M3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (Oct 2013) Chr2 53,266,869 53,273,843 Zm00001d032298 GRMZM2G347280 trpp1 trehalose-6-phosphate phosphatase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr1 220,971,335 220,973,749 Zm00001d044854 GRMZM2G080354 trpp10 trehalose-6-phosphate phosphatase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr9 5,277,549 5,280,537 Zm00001d047110 GRMZM2G178546 trpp11 trehalose-6-phosphate phosphatase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr9 118,915,807 118,919,998 Zm00001d005658 GRMZM2G140078 trpp2 trehalose-6-phosphate phosphatase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr2 182,513,911 182,516,018 Zm00001d006913 GRMZM2G117564 trpp3 trehalose-6-phosphate phosphatase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr2 219,293,809 219,297,189 Zm00001d052227 GRMZM2G151044 trpp4 trehalose-6-phosphate phosphatase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr4 183,819,885 183,822,900 GRMZM2G059840 trpp5 trehalose-6-phosphate phosphatase5 Zhou et al., 2013 Chr4 183,294,232 183,295,877 Zm00001d017502 GRMZM2G112830 trpp6 trehalose-6-phosphate phosphatase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr5 197,722,483 197,728,745 Zm00001d018082 GRMZM2G055150 trpp7 trehalose-6-phosphate phosphatase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr5 213,921,299 213,923,977 Zm00001d020272 GRMZM2G174396 trpp8 trehalose-6-phosphate phosphatase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr7 103,496,049 103,498,536 Zm00001d022192 GRMZM5G840145 trpp9 trehalose-6-phosphate phosphatase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr7 172,473,928 172,477,009 Zm00001d010755 GRMZM2G068943 trps1 trehalose-6-phosphate synthase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from EU659122 & Zhou et al., 2013 Chr8 126,969,528 126,978,127 Zm00001d052060 GRMZM2G312521 trps10 trehalose-6-phosphate synthase10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr4 178,019,071 178,023,237 Zm00001d018342 GRMZM2G122231 trps11 trehalose-6-phosphate synthase11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr5 218,888,425 218,892,344 Zm00001d038728 GRMZM2G001304 trps12 trehalose-6-phosphate synthase12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr6 163,411,334 163,420,782 Zm00001d020396 GRMZM2G019183 trps13 trehalose-6-phosphate synthase13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr7 111,240,634 111,244,556 Zm00001d008338 GRMZM2G416836 trps14 trehalose-6-phosphate synthase14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr8 5,736,542 5,759,202 Zm00001d012748 GRMZM2G118462 trps15 trehalose-6-phosphate synthase15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr8 179,664,693 179,669,878 Zm00001d028267 GRMZM2G099860 trps2 trehalose-6-phosphate synthase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr1 28,638,545 28,642,886 Zm00001d032118 GRMZM2G079928 trps3 trehalose-6-phosphate synthase3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr1 213,709,256 213,712,753 Zm00001d032311 GRMZM2G008226 trps4 trehalose-6-phosphate synthase4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr1 221,831,552 221,837,239 Zm00001d005687 GRMZM2G527891 trps5 trehalose-6-phosphate synthase5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr2 183,363,790 183,370,827 Zm00001d043468 GRMZM2G304274 trps6 trehalose-6-phosphate synthase6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr3 200,986,071 200,997,407 Zm00001d043469 GRMZM2G123277 trps7 trehalose-6-phosphate synthase7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr3 201,083,349 201,088,576 Zm00001d050069 GRMZM2G007736 trps8 trehalose-6-phosphate synthase8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr4 63,832,557 63,836,587 Zm00001d050293 GRMZM2G366659 trps9 trehalose-6-phosphate synthase9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Zhou et al., 2013 Chr4 79,156,177 79,162,011 Zm00001d022338 GRMZM2G322846 trrap1 transformation/transcription domain-associated protein1 Chr7 175,705,901 175,727,170 Zm00001d042111 GRMZM2G039867 tru1 tassels replace upper ears1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li, W. 2012 Chr3 151,328,862 151,332,856 Zm00001d003533 GRMZM2G104843 ts1 tassel seed1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 47,105,187 47,109,372 Zm00001d028806 GRMZM2G455809 ts2 tassel seed2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 46,955,327 46,956,671 GRMZM5G803935 ts4 tasselseed4 Classical Gene Chr3 144,918,011 144,918,720 Zm00001d034629 GRMZM5G862109 ts6 tasselseed6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 298,422,859 298,427,050 Zm00001d018969 GRMZM5G841619 tsa1 tryptophan synthase alpha subunit1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from alignment to cDNA EU334442 Chr7 11,057,172 11,061,083 Zm00001d034461 GRMZM2G046163 tsah1 tryptophan synthase A homolog1 from alignment with cDNA AF271383 Chr1 293,622,653 293,624,784 Zm00001d039113 GRMZM2G325850 tsh1 tassel sheath1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr6 170,248,013 170,249,485 Zm00001d020941 GRMZM2G307588 tsh4 tassel sheath4 Gene model association inferred from similarity with B73 RefGen_v3 gene models based on sequence for spb6 (Clint Whipple, pers comm) Chr7 137,273,600 137,277,139 Zm00001d017616 GRMZM2G058292 tt1 Transparent testa glabra1-like Chr5 201,801,849 201,802,910 Zm00001d014413 GRMZM2G056403 tti1 tel2-interacting protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Garcia et al., 2017 Chr5 45,128,930 45,149,802 Zm00001d052180 GRMZM2G370777 tu1 tunicate1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from sequence AJ430633 Chr4 181,857,308 181,864,042 Zm00001d033850 GRMZM2G153292 tua1 alpha tubulin1 from sequence EU966592; transcript GRMZM2G153292_T06; T06 transcript corresponds to tua1 identified in sequence X15704, B73_v2 Chr1 275,839,810 275,847,427 Zm00001d033850 GRMZM2G153292 tua2 alpha tubulin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Transcript GRMZM2G153292_T01; gene model includes both tua1, and tua2 Chr1 275,839,810 275,847,427 Zm00001d013159 AC195340.3_FG001 tua3 alpha tubulin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT054944 Chr5 5,560,312 5,563,194 Zm00001d013367 GRMZM2G152466 tua4 alpha tubulin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 9,834,794 9,838,085 Zm00001d006651 GRMZM2G099167 tua5 alpha tubulin5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr2 213,473,849 213,477,743 Zm00001d021891 GRMZM2G083243 tua6 alpha tubulin6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr7 165,505,165 165,508,857 Zm00001d027295 GRMZM2G164696 tub1 beta tubulin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Cell Genomics Project (OCT 2013) Chr1 2,104,761 2,106,624 Zm00001d010275 GRMZM2G334899 tub2 beta tubulin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr8 107,054,058 107,056,775 Zm00001d033457 GRMZM2G108766 tub3 beta tubulin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr1 263,191,017 263,194,942 Zm00001d013612 GRMZM2G066191 tub4 beta tubulin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr5 15,364,275 15,368,222 Zm00001d040509 GRMZM2G133802 tub5 beta tubulin5 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: L10636 Chr3 47,520,802 47,522,705 Zm00001d012556 GRMZM2G172932 tub6 beta tubulin6 Gene model association inferred from similarity with B73 RefGen_v3 gene models from Entrez Gene 100382290 Chr8 176,577,453 176,580,718 Zm00001d046996 tub7 beta tubulin7 Chr9 114,521,702 114,522,844 Zm00001d043158 GRMZM2G071790 tubb6 beta tubulin6b Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 542239 Chr3 190,365,000 190,368,453 Zm00001d009780 GRMZM2G073888 tubg1 gamma-tubulin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 80,730,257 80,736,271 Zm00001d037582 GRMZM2G085970 tubg2 gamma-tubulin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: X78891 Chr6 130,519,107 130,523,459 Zm00001d011578 GRMZM2G068586 tubtf1 TUB-transcription factor 1 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,851,163 154,856,045 Zm00001d038310 GRMZM2G129288 tubtf10 TUB-transcription factor 10 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,166,396 154,172,068 Zm00001d029165 GRMZM2G378907 tubtf11 TUB-transcription factor 11 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr1 60,879,438 60,888,390 GRMZM5G871407 tubtf12 TUB-transcription factor 12 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,438,145 167,440,601 Zm00001d047019 GRMZM2G349376 tubtf13 TUB-transcription factor 13 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,435,278 115,437,104 Zm00001d023523 GRMZM2G001272 tubtf14 TUB-transcription factor 14 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr10 8,711,082 8,725,025 Zm00001d043895 GRMZM2G062154 tubtf15 TUB-transcription factor 15 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 213,249,521 213,254,004 Zm00001d042724 GRMZM5G866954 tubtf2 TUB-transcription factor 2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,236,350 178,240,117 Zm00001d053179 GRMZM2G046816 tubtf3 TUB-transcription factor 3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 218,421,396 218,425,679 Zm00001d002896 GRMZM2G108228 tubtf4 TUB-transcription factor 4 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr2 26,117,809 26,122,010 Zm00001d038691 GRMZM2G435445 tubtf5 TUB-transcription factor 5 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,624,149 162,628,635 Zm00001d051568 GRMZM2G176340 tubtf6 TUB-transcription factor 6 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 162,975,759 162,979,667 Zm00001d052765 GRMZM2G163726 tubtf7 TUB-transcription factor 7 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr4 200,038,358 200,042,350 Zm00001d015485 GRMZM2G472945 tubtf8 TUB-transcription factor 8 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 93,095,266 93,097,731 Zm00001d017773 GRMZM2G115701 tubtf9 TUB-transcription factor 9 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009) Chr5 206,380,933 206,384,191 Zm00001d034856 GRMZM2G022269 tufm1 elongation factor TU mitochondrial1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: Entrez Gene 100273405 Chr1 303,903,433 303,908,535 Zm00001d047747 GRMZM2G015730 txln1 taxilin1 B73_v2 alignment to sequene accessino EU968601 Chr9 140,734,592 140,740,564 Zm00001d038352 GRMZM5G856297 uaz121a Chr6 155,011,567 155,014,793 Zm00001d019718 GRMZM2G048257 uaz187 Chr7 53,421,857 53,422,972 Zm00001d035681 GRMZM2G012806 uaz232b(sci) Chr6 40,865,498 40,868,507 Zm00001d045194 GRMZM2G005080 uaz237a(prc) from homology to Genbank sequence AY107786 Chr9 15,741,242 15,741,994 Zm00001d029394 GRMZM2G051879 uaz248a(his3) v4 Chr1 68,805,980 68,808,399 Zm00001d016908 GRMZM2G176358 uaz248b(his3) Chr5 179,675,631 179,680,148 Zm00001d024631 GRMZM2G070780 uaz24a Chr10 81,313,003 81,315,686 Zm00001d002339 GRMZM2G044800 uaz251b(rpS11) Chr2 10,595,493 10,598,060 Zm00001d003948 AC235541.1_FG002 uaz262 Chr2 71,573,370 71,575,580 Zm00001d036363 GRMZM2G169073 uaz265b(sbe) Chr6 85,772,731 85,773,825 Zm00001d015208 GRMZM2G096972 uaz275 Chr5 79,389,803 79,395,312 Zm00001d031060 uaz276 Chr1 175,163,704 175,169,767 Zm00001d037576 GRMZM2G041065 uaz280c(ppp) Chr6 130,116,712 130,119,868 GRMZM2G024823 uaz282 from: EU961905 & Classical Gene; retained with pop1 in 1L Chr1 99,180,327 99,184,416 Zm00001d041679 GRMZM2G063949 uaz288a(ppi) Chr3 133,009,146 133,013,325 Zm00001d031451 GRMZM2G160917 ub2 unbranched2 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009), also from AJ011618 and Chuck et al, 2014 Chr1 190,382,866 190,386,589 Zm00001d052890 GRMZM2G460544 ub3 unbranched3 Gene model association inferred from similarity with B73 RefGen_v3 gene models assigned by the Grassius project, (Yilmaz et al 2009), from: AJ011620, and Chuck et al., 2014 Chr4 203,611,347 203,615,518 GRMZM2G431821 ubf9 ubiquitin fusion protein9 Chr8 171,156,792 171,157,513 Zm00001d015327 GRMZM2G409726 ubi1 ubiquitin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU734563 Chr5 84,630,842 84,634,232 Zm00001d053838 GRMZM2G419891 ubi2 ubiquitin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Classical Gene Chr4 242,132,524 242,136,885 Zm00001d036717 GRMZM2G014119 ubi3 ubiquitin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Ding et al., 2017 Chr6 98,730,481 98,732,747 Zm00001d038376 GRMZM2G012052 ubi7 ubiquitin-conjugating enzyme7 Chr6 155,902,916 155,911,076 Zm00001d017432 GRMZM2G156575 ubl1 U6 biogenesis like1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Li et al., 2016 Chr5 195,844,968 195,847,238 Zm00001d035844 GRMZM2G017845 ubr1 ubiquitin receptor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from BT085014 Chr6 55,321,293 55,329,245 Zm00001d031205 GRMZM2G007381 uce1 ubiquitin conjugating enzyme1 Chr1 182,002,231 182,006,778 GRMZM2G381709 uce10 ubiquitin conjugating enzyme10 Chr6 164,043,237 164,047,725 GRMZM2G464572 uce11 ubiquitin conjugating enzyme11 Chr9 57,913,128 57,917,754 Zm00001d009552 GRMZM2G015287 uce12 ubiquitin conjugating enzyme12 Chr8 70,006,056 70,009,786 Zm00001d045049 GRMZM2G177276 uce2 ubiquitin conjugating enzyme2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Hawkins et al., 2014 Chr9 11,145,384 11,149,540 Zm00001d027427 GRMZM2G070047 uce3 ubiquitin conjugating enzyme3 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: U49913 Chr1 5,095,291 5,098,140 Zm00001d001913 GRMZM2G102471 uce4 ubiquitin conjugating enzyme4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 2,799,861 2,803,017 Zm00001d033744 GRMZM2G022859 uce5 ubiquitin conjugating enzyme5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 272,666,382 272,672,688 Zm00001d041216 GRMZM2G018447 uce6 ubiquitin conjugating enzyme6 Chr3 105,946,908 105,964,472 Zm00001d032831 GRMZM2G053764 uce7 ubiquitin conjugating enzyme7 Chr1 239,609,852 239,611,554 Zm00001d014108 GRMZM2G146374 uce8 ubiquitin conjugating enzyme8 Chr5 32,771,043 32,774,720 Zm00001d053296 GRMZM2G027378 uce9 ubiquitin conjugating enzyme9 Chr4 224,801,163 224,804,512 Zm00001d035916 GRMZM2G141009 uck1 UMP/CMP kinase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 60,137,069 60,138,570 Zm00001d024951 GRMZM5G852877 ucp1 uncoupling protein1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xu et al., 2017 Chr10 96,577,977 96,581,566 Zm00001d004561 GRMZM2G165629 ucp2 uncoupling protein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Xu et al., 2017 Chr2 118,161,397 118,171,157 Zm00001d048583 GRMZM2G000510 ucp3 uncoupling protein homolog3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 220,381 224,895 Zm00001d001864 GRMZM2G040627 udg1 uracil-DNA glycosylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 2,066,590 2,076,640 Zm00001d033186 GRMZM2G058057 ufg10 chr1 model; previous model was to chr8 replaces chr8 model Chr1 253,268,936 253,272,028 Zm00001d008210 GRMZM2G103512 ufg10a Chr8 1,296,796 1,298,016 Zm00001d047427 GRMZM2G117779 ufg13a Chr9 129,719,179 129,720,331 Zm00001d026273 GRMZM2G137009 ufg15 Chr10 142,618,005 142,622,387 Zm00001d021828 GRMZM2G006942 ufg17 Chr7 163,880,048 163,887,890 Zm00001d013603 GRMZM2G094900 ufg25 Chr5 15,168,335 15,173,013 Zm00001d048604 ufg26 Chr4 1,058,559 1,060,856 Zm00001d013492 GRMZM2G102754 ufg27 Chr5 12,694,666 12,700,930 Zm00001d044939 GRMZM2G150656 ufg41 Chr9 7,775,710 7,778,040 Zm00001d029454 GRMZM2G149224 ufg43 Chr1 71,428,751 71,437,172 Zm00001d031726 GRMZM2G175396 ufg50 Chr1 199,707,996 199,710,074 Zm00001d033189 GRMZM2G172512 ufg53 Chr1 253,284,685 253,287,730 Zm00001d020727 GRMZM2G147191 ufg54 Chr7 130,345,805 130,357,946 Zm00001d022141 GRMZM5G898768 ufg57 Chr7 171,058,765 171,061,553 Zm00001d015029 GRMZM2G466281 ufg60 Chr5 72,778,046 72,784,506 Zm00001d047184 GRMZM2G052654 ufg68 Chr9 121,266,113 121,270,661 Zm00001d036000 ufg69 Chr6 65,226,988 65,229,647 Zm00001d047126 GRMZM2G118022 ufg70 Chr9 119,391,567 119,397,117 Zm00001d045557 GRMZM5G870176 ufg71 Chr9 26,655,928 26,661,244 Zm00001d010994 GRMZM2G024838 ufg74 Chr8 136,140,894 136,141,484 Zm00001d026445 GRMZM2G120136 ufg75b Chr10 145,970,289 145,976,752 Zm00001d029264 GRMZM2G040954 ufg77 Chr1 64,207,240 64,216,522 Zm00001d010946 GRMZM2G034043 ufg80 Chr8 134,633,259 134,637,535 Zm00001d019256 GRMZM2G117878 ufgt2 UDP-flavonol-glycosyltransferase2 Chr7 24,211,071 24,212,860 Zm00001d045254 GRMZM2G063550 ufgt3 UDP-flavone-glycosyltransferase3 Chr9 17,152,491 17,154,297 Zm00001d006309 GRMZM6G729818 ugp1 UDP-glucose pyrophosphorylase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: EU959978 & T14797 (chr 2 hit) to v3 Chr2 204,243,913 204,249,878 Zm00001d021421 GRMZM2G032003 ugp2 UDP-glucose pyrophosphorylase2 Gene model association inferred from similarity with B73 RefGen_v3 gene models From: T14797 (chr 7 hit) Chr7 151,705,669 151,712,216 Zm00001d037383 GRMZM2G162755 ugt1 UDP-glucosyl transferase1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Rius et al., 2016 Chr6 123,804,940 123,806,574 Zm00001d014191 GRMZM2G134903 ugu1 UTP-glucose-P-uridyltransferase homolog Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 35,767,017 35,771,795 Zm00001d014777 GRMZM2G457125 umc1 Chr5 62,832,940 62,833,614 Zm00001d005636 GRMZM2G098076 umc1004 Chr2 181,459,859 181,465,569 Zm00001d012509 GRMZM2G091121 umc1005 low confidence Chr8 175,618,869 175,624,876 Zm00001d005002 GRMZM2G115658 umc1028 Chr2 153,238,644 153,242,689 Zm00001d021949 GRMZM2G023346 umc1029 Chr7 166,838,764 166,841,455 Zm00001d027477 GRMZM2G448701 umc1041 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,237,666 6,238,642 Zm00001d026126 GRMZM2G142832 umc1045 Chr10 139,063,429 139,066,366 Zm00001d006561 GRMZM2G144180 umc1049 Chr2 210,943,810 210,944,832 Zm00001d051977 GRMZM2G130002 umc104a Chr4 175,738,176 175,743,156 Zm00001d018428 GRMZM2G178038 umc104b Chr5 220,579,161 220,583,564 Zm00001d016016 GRMZM2G346133 umc1060 Chr5 139,737,481 139,737,957 Zm00001d033954 GRMZM2G301071 umc106a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,578,119 279,582,280 Zm00001d030579 GRMZM2G152526 umc1076 Chr1 145,820,512 145,824,791 Zm00001d047453 GRMZM2G359566 umc1078 Chr9 130,691,554 130,708,860 Zm00001d013431 GRMZM2G090172 umc107b(croc) Chr5 11,269,815 11,275,443 Zm00001d044806 GRMZM2G136831 umc109 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 2,940,677 2,943,325 Zm00001d053808 GRMZM2G041310 umc1101 Chr4 241,457,479 241,460,882 Zm00001d022143 GRMZM2G414043 umc1103 Chr7 171,094,069 171,102,469 Zm00001d037018 GRMZM2G041258 umc1105 Chr6 109,291,682 109,292,167 Zm00001d046995 GRMZM6G778611 umc1107 Chr9 114,408,410 114,410,512 Zm00001d005897 GRMZM2G123972 umc1108 Chr2 192,117,923 192,119,901 Zm00001d034480 GRMZM2G163912 umc1111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 294,122,557 294,127,795 Zm00001d021592 GRMZM2G139931 umc1112 Chr7 157,525,044 157,533,907 Zm00001d026633 GRMZM2G440259 umc1113 Chr10 149,198,714 149,200,759 Zm00001d037909 GRMZM5G898274 umc1114 Chr6 141,669,423 141,669,944 Zm00001d025726 GRMZM2G167280 umc1115 Chr10 127,609,718 127,611,616 Zm00001d049333 GRMZM2G050982 umc1117 Chr4 26,910,739 26,922,418 Zm00001d034547 GRMZM2G012224 umc1118 Chr1 295,996,848 295,998,888 Zm00001d047236 GRMZM2G136538 umc1120 NCBI: "not annotated on reference assembly" NCBI: "not annotated on reference assembly" Chr9 123,538,205 123,542,793 Zm00001d031853 GRMZM2G016210 umc1122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 204,145,139 204,149,948 Zm00001d031439 GRMZM5G854901 umc1123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 190,215,777 190,218,891 Zm00001d039192 GRMZM2G412937 umc1127 Chr6 172,237,415 172,245,052 Zm00001d032473 GRMZM2G031893 umc1128 Chr1 227,870,996 227,876,186 Zm00001d010724 umc1130 Chr8 125,953,884 125,957,239 Zm00001d052816 GRMZM2G131957 umc1132 Chr4 201,805,607 201,807,418 GRMZM2G105253 umc1134 Chr7 147,615,524 147,620,033 Zm00001d043406 GRMZM2G105863 umc1135 Chr3 198,944,183 198,946,076 Zm00001d048440 GRMZM2G178106 umc1137 Chr9 156,458,781 156,465,887 Zm00001d008256 GRMZM2G007915 umc1139 Chr8 3,193,712 3,222,186 Zm00001d046690 GRMZM2G121621 umc114 Chr9 102,457,600 102,459,803 Zm00001d051044 GRMZM2G030125 umc1142 Chr4 138,472,340 138,473,695 Zm00001d032504 GRMZM2G438386 umc1147 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 228,756,797 228,759,565 Zm00001d011958 GRMZM2G105005 umc1149 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 165,203,502 165,205,430 Zm00001d027851 GRMZM2G162814 umc115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 15,175,214 15,177,892 Zm00001d023395 GRMZM2G050709 umc1152 Chr10 4,672,326 4,673,327 Zm00001d018541 GRMZM2G133764 umc1153 Chr5 222,662,281 222,667,195 Zm00001d017079 GRMZM2G044359 umc1155 Chr5 184,659,751 184,662,560 Zm00001d009591 GRMZM2G058913 umc1157 Chr8 72,047,547 72,074,493 Zm00001d018896 GRMZM2G144726 umc1159 Chr7 8,603,180 8,607,570 Zm00001d045104 GRMZM2G016323 umc1170 Chr9 12,687,973 12,699,001 Zm00001d041553 AC210168.4_FG003 umc1174 Chr3 126,926,038 126,926,802 Zm00001d026452 umc1176 Chr10 146,098,952 146,102,717 Zm00001d027332 GRMZM2G137329 umc1177 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,095,308 3,095,604 Zm00001d053959 GRMZM2G419209 umc1180 see comment see comment Chr4 244,245,985 244,246,434 Zm00001d026367 GRMZM2G324767 umc1196a Chr10 144,422,318 144,422,683 Zm00001d028122 GRMZM2G127635 umc1200 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 23,497,185 23,499,077 Zm00001d009352 GRMZM2G578572 umc120a Chr8 58,140,699 58,156,859 Zm00001d021999 GRMZM2G167932 umc1214 Chr7 167,781,355 167,785,408 Zm00001d034641 GRMZM2G061626 umc1220 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,696,773 298,697,294 Zm00001d027688 GRMZM2G056870 umc1222 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 11,158,115 11,165,247 Zm00001d040660 GRMZM2G072890 umc1223 Chr3 56,947,607 56,948,312 Zm00001d035574 GRMZM2G094581 umc1229 Chr6 34,421,939 34,431,541 Zm00001d024531 GRMZM2G110145 umc1239 Chr10 76,628,321 76,635,128 Zm00001d029747 GRMZM2G085198 umc1243 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 85,172,704 85,174,464 Zm00001d032656 GRMZM2G113781 umc1245 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 233,337,054 233,340,892 Zm00001d024996 GRMZM2G075315 umc1246 Chr10 98,385,298 98,386,222 Zm00001d026460 umc1249 Chr10 146,257,808 146,261,085 Zm00001d008827 GRMZM2G087146 umc124a(chk) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 21,834,900 21,838,661 Zm00001d053853 GRMZM2G111319 umc124b(chk) Chr4 242,214,223 242,216,703 Zm00001d021764 GRMZM2G033493 umc1251 Chr7 162,638,409 162,642,926 Zm00001d007435 GRMZM2G023585 umc1252 Chr2 231,635,751 231,645,139 Zm00001d012822 GRMZM2G084164 umc1253 Chr5 919,123 924,671 Zm00001d031705 GRMZM2G045135 umc1254 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,015,599 199,019,446 Zm00001d036611 GRMZM2G128485 umc1257 Chr6 94,246,544 94,251,230 Zm00001d045470 GRMZM2G396553 umc1258 Chr9 23,397,355 23,399,439 Zm00001d010877 GRMZM2G372200 umc1263 Chr8 131,819,719 131,826,254 Zm00001d016916 GRMZM2G025236 umc1264 Chr5 179,759,648 179,775,305 Zm00001d046786 GRMZM2G010884 umc1267 Chr9 105,955,854 105,957,260 Zm00001d012423 GRMZM2G112912 umc1268 Chr8 174,293,032 174,293,445 Zm00001d017444 umc126a v4 Chr5 196,011,766 196,014,768 Zm00001d046510 GRMZM2G342738 umc1271 Chr9 93,175,886 93,176,939 Zm00001d025665 GRMZM2G173597 umc1272 Chr10 125,373,155 125,379,315 Zm00001d044037 GRMZM2G047298 umc1273 Chr3 217,451,090 217,454,898 Zm00001d032238 GRMZM2G092595 umc1278 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 218,358,529 218,366,044 Zm00001d025777 GRMZM2G098577 umc1280 Chr10 129,239,384 129,245,248 Zm00001d033846 GRMZM2G026780 umc1290 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 275,610,676 275,610,975 Zm00001d027446 GRMZM2G176604 umc1292 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,491,481 5,495,299 Zm00001d023274 GRMZM2G181546 umc1293 provisional Chr10 1,972,478 1,973,202 Zm00001d022130 GRMZM2G080567 umc1295a Chr7 170,933,212 170,933,679 Zm00001d038862 GRMZM2G021406 umc1296 Chr6 166,027,177 166,029,976 Zm00001d030009 GRMZM2G086869 umc1297 Chr1 98,960,515 98,962,408 Zm00001d011091 GRMZM2G060045 umc12a Chr8 138,660,037 138,672,465 Zm00001d023654 GRMZM2G125931 umc130 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 13,703,506 13,706,153 Zm00001d049767 GRMZM2G377165 umc1303 Chr4 43,883,748 43,891,489 GRMZM2G133552 umc1304 Chr8 12,612,247 12,613,539 Zm00001d033665 GRMZM2G153476 umc1306 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,986,885 269,988,368 Zm00001d003974 GRMZM2G024933 umc131 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: AY771215 Chr2 72,986,095 72,986,979 Zm00001d042589 GRMZM2G105184 umc1311 Chr3 172,882,215 172,885,085 Zm00001d037847 GRMZM2G061912 umc1314 Chr6 139,626,653 139,627,309 Zm00001d011204 GRMZM2G116083 umc1316 Chr8 142,921,602 142,927,201 Zm00001d023344 GRMZM5G898755 umc1318 not in v4 annotation not in v4 annotation Chr10 3,840,240 3,855,248 Zm00001d023372 GRMZM2G022318 umc1319 Chr10 4,210,185 4,213,497 Zm00001d044026 GRMZM5G831142 umc1320 Chr3 217,194,735 217,222,112 Zm00001d030990 GRMZM2G100121 umc1323 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 172,352,530 172,357,352 Zm00001d021614 GRMZM2G108874 umc1324 Chr7 158,107,602 158,111,238 Zm00001d012962 GRMZM2G144109 umc1325 Chr5 2,395,497 2,399,273 Zm00001d038824 GRMZM2G014303 umc132a(chk) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 165,288,575 165,294,725 Zm00001d025612 AC225176.2_FG003 umc1330 Chr10 123,896,700 123,897,435 Zm00001d034768 GRMZM5G874478 umc1331 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 301,674,705 301,677,768 Zm00001d031724 GRMZM2G477872 umc1335 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,517,587 199,526,569 Zm00001d024754 GRMZM2G061135 umc1336 Chr10 86,460,332 86,461,525 Zm00001d024319 GRMZM2G073077 umc1345 Chr10 64,272,530 64,275,570 Zm00001d051056 GRMZM2G366392 umc1346 Chr4 139,235,984 139,238,663 Zm00001d016625 GRMZM2G170742 umc1349 Chr5 170,513,382 170,514,256 Zm00001d038999 GRMZM2G038284 umc1350 Chr6 168,511,300 168,514,580 Zm00001d037745 GRMZM2G032896 umc1352a Chr6 136,194,441 136,198,848 Zm00001d014753 GRMZM5G823135 umc1355 Chr5 61,546,176 61,556,400 Zm00001d032008 GRMZM2G112617 umc1356 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 209,290,032 209,291,244 Zm00001d048055 GRMZM5G824920 umc1366 Chr9 149,059,512 149,063,313 Zm00001d023885 GRMZM2G037378 umc1367 Chr10 26,305,370 26,308,988 Zm00001d032010 GRMZM2G119761 umc1374 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 209,338,030 209,341,591 Zm00001d037937 GRMZM2G117439 umc1379 Chr6 142,777,670 142,778,191 Zm00001d023272 GRMZM2G138659 umc1380 Chr10 1,803,506 1,810,618 Zm00001d033132 GRMZM2G414192 umc1383 Chr1 251,722,257 251,723,494 Zm00001d030999 GRMZM2G052650 umc1386b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 172,720,285 172,725,171 Zm00001d038002 GRMZM2G093325 umc1388 Chr6 144,795,979 144,802,557 Zm00001d039974 GRMZM2G395983 umc1392 Chr3 21,321,680 21,322,321 Zm00001d020595 GRMZM2G052667 umc1393 Chr7 124,130,947 124,133,914 Zm00001d039319 GRMZM5G848602 umc1394 Chr3 1,692,001 1,706,793 Zm00001d030894 GRMZM2G329655 umc1395 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,194,776 166,197,012 Zm00001d031534 GRMZM2G005652 umc1396 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 193,343,064 193,348,037 Zm00001d028572 GRMZM2G160506 umc1397 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 39,461,169 39,464,573 Zm00001d043479 GRMZM2G055898 umc1399 Chr3 201,465,990 201,469,783 Zm00001d019120 umc1401 Chr7 17,888,936 17,889,901 Zm00001d025485 GRMZM2G074793 umc1402 Chr10 120,274,148 120,274,636 Zm00001d028398 GRMZM2G108032 umc1403 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 33,451,482 33,454,805 Zm00001d043620 GRMZM2G069061 umc1404 Chr3 205,370,908 205,371,306 Zm00001d033459 GRMZM2G108861 umc140a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,294,917 263,296,681 GRMZM6G799230 umc1411a scaffold_511 279 2,173 Zm00001d037771 GRMZM2G030123 umc1413 Chr6 136,915,169 136,922,617 Zm00001d008305 GRMZM2G020148 umc1414 Chr8 4,713,419 4,715,161 Zm00001d009950 GRMZM2G063676 umc1415 Chr8 91,946,184 91,954,177 Zm00001d034443 GRMZM2G078200 umc1421 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 293,098,082 293,102,502 Zm00001d002500 GRMZM2G031904 umc1422 Chr2 14,128,413 14,128,673 Zm00001d018730 GRMZM2G006071 umc1426 Chr7 3,302,379 3,306,900 Zm00001d019041 GRMZM6G285883 umc1428 Chr7 13,885,254 13,888,500 Zm00001d014888 umc1429 Chr5 67,030,219 67,031,109 Zm00001d033709 GRMZM2G004012 umc1431 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 271,942,636 271,943,635 Zm00001d023434 GRMZM2G113073 umc1432 Chr10 5,439,443 5,444,101 Zm00001d020013 GRMZM2G001114 umc1433 Chr7 85,541,771 85,551,145 Zm00001d035934 GRMZM2G473788 umc1444 Chr6 61,207,143 61,214,618 Zm00001d012932 GRMZM2G121840 umc1445 Chr5 2,183,943 2,186,302 Zm00001d032948 GRMZM2G162508 umc1446 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 244,409,830 244,413,837 Zm00001d014168 GRMZM2G137694 umc1447 Chr5 34,952,246 34,956,390 Zm00001d041330 GRMZM2G061655 umc1449 Chr3 112,431,365 112,432,795 Zm00001d020910 GRMZM2G181371 umc1450 Chr7 136,264,881 136,266,357 Zm00001d028989 GRMZM2G107463 umc1452 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 53,771,917 53,776,759 Zm00001d025482 GRMZM5G857936 umc1453 Chr10 120,131,870 120,132,917 Zm00001d003948 AC235541.1_FG002 umc1454 Chr2 71,573,370 71,575,580 Zm00001d010211 GRMZM5G887068 umc1457 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 104,190,537 104,193,407 Zm00001d039425 GRMZM2G055089 umc1458 Chr3 3,943,651 3,949,813 Zm00001d025586 GRMZM2G125233 umc146 Chr10 123,295,278 123,297,912 Zm00001d030346 AC202185.4_FG004 umc1461 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 124,047,279 124,048,368 Zm00001d038525 GRMZM2G010357 umc1463 Chr6 159,266,842 159,275,183 Zm00001d003310 GRMZM2G447691 umc1465 Chr2 39,700,454 39,702,802 Zm00001d028024 GRMZM2G134367 umc1467 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 20,740,613 20,741,926 Zm00001d030262 GRMZM2G466982 umc1469 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 117,245,700 117,246,281 Zm00001d009910 GRMZM2G145573 umc1470 Chr8 89,031,988 89,036,730 Zm00001d029144 GRMZM2G124576 umc1472 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 60,427,117 60,431,202 Zm00001d052266 umc1476 Chr4 185,249,435 185,254,161 Zm00001d026063 GRMZM2G016477 umc1477 Chr10 137,333,892 137,337,401 Zm00001d028695 GRMZM2G042032 umc1479 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,355,977 43,359,324 Zm00001d016756 GRMZM2G037865 umc1482 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 175,026,874 175,027,977 Zm00001d008433 GRMZM5G872442 umc1483 Chr8 8,627,115 8,631,237 Zm00001d027630 GRMZM2G107532 umc1484 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 9,488,000 9,492,140 Zm00001d032132 GRMZM2G389567 umc1486 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 214,041,360 214,041,602 Zm00001d043613 GRMZM2G077307 umc1489 Chr3 205,192,540 205,198,352 Zm00001d038885 GRMZM2G174741 umc1490 Chr6 166,378,953 166,383,380 Zm00001d012818 GRMZM2G019866 umc1491 Chr5 845,040 846,051 Zm00001d047191 GRMZM2G151387 umc1492 Chr9 121,460,581 121,466,033 GRMZM2G161154 umc1495 Chr3 19,835,198 19,836,420 Zm00001d034360 GRMZM2G069218 umc1500 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 290,672,852 290,677,815 Zm00001d042043 GRMZM6G542104 umc1501 Chr3 148,439,507 148,444,239 Zm00001d040691 GRMZM2G034855 umc1504 Chr3 58,480,096 58,484,905 Zm00001d025946 GRMZM2G057084 umc1506 Chr10 134,457,486 134,477,101 Zm00001d025793 GRMZM2G071518 umc1507 Chr10 129,804,930 129,812,444 Zm00001d048841 GRMZM2G154523 umc1509 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 6,223,611 6,225,506 Zm00001d050368 GRMZM2G004878 umc1511 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 84,247,503 84,248,847 Zm00001d017629 AC185464.3_FG003 umc1524 Not found in NCBI Unigenes v3 low confidence Chr5 202,544,328 202,544,770 Zm00001d034595 GRMZM5G831951 umc1538a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,417,890 297,419,492 Zm00001d042535 GRMZM2G109429 umc1539 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 171,055,517 171,058,160 Zm00001d003328 GRMZM2G124079 umc1541 Chr2 40,259,439 40,260,926 Zm00001d024722 GRMZM2G101926 umc155 Chr10 85,123,160 85,131,753 Zm00001d034410 GRMZM2G371210 umc1553 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,172,345 292,176,235 Zm00001d014141 GRMZM2G133895 umc1557a Chr5 34,046,773 34,051,266 Zm00001d029803 GRMZM2G047187 umc1558 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 87,586,799 87,591,619 Zm00001d006461 GRMZM2G179459 umc1560 Chr2 208,886,176 208,891,521 Zm00001d010840 GRMZM2G059693 umc1562 Chr8 129,739,531 129,743,950 Zm00001d004322 GRMZM5G896902 umc1581 Chr2 103,034,940 103,035,607 Zm00001d045517 GRMZM2G071602 umc1586 Chr9 25,249,729 25,252,528 Zm00001d024926 GRMZM2G401883 umc1589 Chr10 95,315,410 95,315,850 Zm00001d031279 GRMZM2G176962 umc1590 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 184,897,760 184,900,636 Zm00001d015477 GRMZM2G083526 umc1591 Chr5 92,669,605 92,675,745 Zm00001d044685 GRMZM2G107839 umc1594 Chr3 234,864,889 234,867,348 Zm00001d013785 GRMZM2G124791 umc1597 Chr5 20,154,985 20,158,509 Zm00001d052612 GRMZM2G013128 umc15a Chr4 194,612,477 194,615,657 Zm00001d030940 GRMZM2G038855 umc1601 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 168,453,787 168,458,127 Zm00001d006865 GRMZM2G109120 umc1604 Chr2 218,158,310 218,159,847 Zm00001d034865 GRMZM5G821637 umc1605 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,197,047 304,201,731 Zm00001d035208 GRMZM2G301803 umc1606 Chr6 9,905,774 9,910,868 GRMZM2G033330 umc1607 low confidence Chr8 165,739,641 165,744,934 Zm00001d039851 GRMZM5G871336 umc1608 Chr3 16,611,925 16,616,740 Zm00001d014722 GRMZM2G098793 umc1609 Chr5 60,563,835 60,565,313 Zm00001d030698 GRMZM2G132077 umc1611 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 154,144,314 154,144,817 Zm00001d027288 GRMZM2G161560 umc1613 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 1,841,722 1,843,589 Zm00001d034263 GRMZM2G472827 umc161a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 288,275,261 288,289,725 GRMZM5G801886 umc1626 withdrawn by NCBI Chr1 157,148,809 157,149,892 Zm00001d009772 GRMZM2G156857 umc1627 Gene model association inferred from similarity with B73 RefGen_v3 gene models from: BT056224 Chr8 80,442,196 80,442,981 Zm00001d019002 GRMZM2G101024 umc1632 Chr7 12,662,001 12,662,237 Zm00001d007076 GRMZM2G459363 umc1633 Chr2 221,755,305 221,756,948 Zm00001d045468 GRMZM2G121333 umc1634 Chr9 23,320,699 23,323,957 Zm00001d004138 GRMZM2G085086 umc1635 Chr2 85,736,310 85,737,686 Zm00001d044528 GRMZM2G064031 umc1641 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 230,956,846 230,957,973 Zm00001d053585 GRMZM2G121495 umc1650 Chr4 235,371,631 235,376,042 Zm00001d049361 GRMZM5G852329 umc1652 Chr4 27,879,419 27,894,268 Zm00001d039120 GRMZM2G438895 umc1653 Chr6 170,405,737 170,413,431 Zm00001d005297 GRMZM2G083972 umc1658 Chr2 168,256,464 168,265,313 Zm00001d012709 GRMZM2G160444 umc1663 Chr8 179,050,887 179,052,423 Zm00001d031636 GRMZM2G083725 umc1664 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 197,046,358 197,048,201 Zm00001d048731 GRMZM2G037472 umc1669 Chr4 4,464,763 4,469,275 Zm00001d018724 GRMZM2G044060 umc1672 Chr7 3,127,808 3,138,251 Zm00001d012596 GRMZM2G139374 umc1673 Chr8 177,034,496 177,034,942 Zm00001d048203 GRMZM2G004377 umc1675 Chr9 152,377,111 152,382,143 Zm00001d013033 AC210013.4_FG018 umc1679 Chr5 3,492,135 3,493,834 Zm00001d022554 GRMZM2G135341 umc168 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,921,907 179,928,103 GRMZM2G057958 umc1680 Chr5 197,642,033 197,643,571 Zm00001d025576 umc1697 Chr10 122,835,505 122,836,158 Zm00001d045392 GRMZM2G131421 umc1698 Chr9 20,480,509 20,481,751 Zm00001d051139 GRMZM2G125529 umc1702 Chr4 145,546,078 145,549,609 Zm00001d054086 GRMZM2G167149 umc1707 Chr4 246,132,178 246,132,864 Zm00001d022062 GRMZM2G165069 umc1708 Chr7 169,196,761 169,197,781 Zm00001d021739 GRMZM2G008687 umc1710 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 161,896,793 161,900,341 Zm00001d028187 GRMZM2G107815 umc1711 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 25,755,280 25,759,748 Zm00001d020820 AC208031.3_FG002 umc1713 Chr7 133,907,684 133,908,130 Zm00001d032533 GRMZM2G171559 umc1715 Gene model association inferred from similarity with B73 RefGen_v3 gene models LOC100383109 GRMZM2G171559 LOC100276185 -- Chr1 229,829,797 229,830,137 Zm00001d040111 GRMZM2G076029 umc1717a Chr3 27,971,283 27,971,801 Zm00001d029918 GRMZM2G114667 umc1734 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 94,336,239 94,343,520 Zm00001d010193 GRMZM2G164090 umc1735 Chr8 103,471,796 1