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CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The most recent updates can be found on our curation site or by clicking the Most Recent Data option in the menu below.


         Recommended Genes

Most recent data | Six months | One year | All time

New or updated genes since one year ago. The cutoff date is February 3rd, 2011

Last UpdateGeneFull Name : DescriptionChromosome
or Bin		Gene
Model		Recent ReferenceOrthologsUpdate information
36 days agorgh3 rough endosperm3: Mature rgh3 seeds show a rough, etched, or pitted endosperm surface as well as a reduced seed size
 
    Fouquet, R et al. 2011. Plant Cell 0     Reference: December 27th, 2011
Gene Product: December 29th, 2011
Variation: December 29th, 2011
37 days agoo5 opaque endosperm5: like o1; virescent to yellow or white seedlings
7.02
 GRMZM2G142873
 Myers, AM et al. 2011. Plant Cell 23:2331-2347     Reference: December 28th, 2011
Gene Product: June 17th, 2011
Variation: June 17th, 2011
Gene Model: September 19th, 2011
37 days agoo7 opaque endosperm7: like o1; high lysine content
10.07
 GRMZM2G074759
 Miclaus, M et al. 2011. Genetics 189:1271-1280     Reference: December 28th, 2011
Gene Product: December 20th, 2011
Variation: December 16th, 2011
Gene Model: December 16th, 2011
37 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominance
1.09
    Studer, A; Zhao, Q; Ross-Ibarra, J; Doebley, JF. 2011. Nature Genetics. 43:1160-1163     Reference: December 28th, 2011
Gene Product: January 31st, 2005
Variation: January 20th, 2011
38 days agopgd2 6-phosphogluconate dehydrogenase2: electrophoretic mobility, null allele is known; cytosolic; dimeric; intra/interlocus hybrid bands occur; cDNA probe
3.05
    Averill, RH et al. 1998. Plant J 14:449-457     Reference: December 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
38 days agopgd1 6-phosphogluconate dehydrogenase1: electrophoretic mobility, null alleles occur; cytosolic; dimeric, intra/interlocus hybrid bands occur; cDNA csu262 single copy
6.01
    Averill, RH et al. 1998. Plant J 14:449-457     Reference: December 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
39 days agopebp8 phosphatidylethanolamine-binding protein8:
 
 GRMZM2G179264
 Meng, X et al. 2011. Plant Cell 23:942-960     Reference: December 26th, 2011
Gene Product: May 6th, 2011
Variation: December 15th, 2010
Gene Model: May 6th, 2011
39 days agorp1 resistance to Puccinia sorghi1: dominant Rp1 resistant
10.01
    Chaikam, V et al. 2011. Theor Appl Genet 123:985-997     Reference: December 26th, 2011
Variation: September 1st, 2003
43 days agobm3 brown midrib3: like bm1; has lowered activity of caffeic acid O-methyl transferase; application: modified lignin has improved digestibility in ruminants; silage corn with bm3 is in production. However, bm3 results in weaker stalks, reduced stover and grain yield, and in some cases reduced maturity; these effects appear genotype-specific
4.04
    Fornale, S et al. 2010. Plant J 64:633-644     Reference: December 22nd, 2011
Gene Product: February 16th, 2011
Variation: October 16th, 2007
43 days agomyb31 MYB31 transcription factor: R2R3-MYB factor, regulates lignin genes
 
    Fornale, S et al. 2010. Plant J 64:633-644     Reference: December 22nd, 2011
Gene Product: February 16th, 2011
Variation: February 16th, 2011
43 days agomyb42 myb transcription factor 42:
 
    Fornale, S et al. 2010. Plant J 64:633-644     Reference: December 22nd, 2011
Gene Product: February 16th, 2011
Variation: February 16th, 2011
45 days agona1 nana plant1: short, erect dwarf; no response to gibberellins
3.06 - 3.08
 GRMZM2G449033
 Hartwig, T et al. 2011. Proc Natl Acad Sci, USA 108:19814-19819     Reference: December 20th, 2011
Gene Product: December 20th, 2011
Variation: December 20th, 2011
Gene Model: December 20th, 2011
46 days agofl2 floury2: endosperm opaque, soft; dosage effect; encodes an abnormal 24kDa alpha-zein as deduced from clone
4.03
 GRMZM2G397687
 Pirona, R et al. 2005. Maydica 50:515-530     Reference: June 24th, 2009
Gene Product: September 1st, 2003
Variation: August 24th, 2009
Gene Model: December 19th, 2011
48 days agorrb1 related to retinoblastoma1: nuclear, low copy, ubiquitous expression; phosphorylation dependent role in cell division
2.09
    Gordon-Kamm, W et al. 2002. Proc Natl Acad Sci, USA 99:11975-11980     Reference: December 17th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
49 days agoAY109994  :
10.02
        Variation: December 16th, 2011
51 days agopsy2 phytoene synthase2: single copy cDNA, csu572, similar to tomato phytoene synthase; carotenoid biosynthesis
8.07
    Li, F; Tsfadia, O; Wurtzel, E. 2009. Plant Signaling and Behavior. 4:208-211     Reference: December 14th, 2011
Gene Product: December 14th, 2011
Variation: September 12th, 2005
51 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
 GRMZM2G300348
 Li, F; Tsfadia, O; Wurtzel, E. 2009. Plant Signaling and Behavior. 4:208-211     Reference: December 14th, 2011
Gene Product: December 14th, 2011
Variation: May 28th, 2004
Gene Model: September 22nd, 2011
51 days agopsy3 phytoene synthase3: induced by salt and drought but not ABA; complements bacterial PSY deficiency (Li et al 2008)
7.03
    Li, F; Tsfadia, O; Wurtzel, E. 2009. Plant Signaling and Behavior. 4:208-211     Reference: December 14th, 2011
Gene Product: December 14th, 2011
Variation: August 26th, 2011
52 days agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
    Matusova, R et al. 2005. Plant Physiol 130:920-934     Reference: March 5th, 2010
Gene Product: December 13th, 2011
Variation: September 1st, 2003
52 days agovp9 viviparous9: (was y7, z1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling
7.02
    Khavkin, EE. 1998. Genetic control of plant morphogenesis. Fiziol Rast 45:676-689     Reference: April 3rd, 2008
Gene Product: December 13th, 2011
Variation: October 31st, 2006
52 days agohyd3 hydroxylase3:
 
    Li, Q et al. 2010. Transgenic Research 19:1053-1068     Reference: August 30th, 2011
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
52 days agohyd4 hydroxylase4:
 
    Li, Q et al. 2010. Transgenic Research 19:1053-1068     Reference: August 30th, 2011
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
52 days agohyd5 hydroxylase5: beta-carotene hydroxylase
 
    Vallabhaneni, R, et al. 2009. Plant Physiol. 151:1635-1645     Reference: April 7th, 2010
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
52 days agohyd6 hydroxylase6:
 
    Li, Q et al. 2010. Transgenic Research 19:1053-1068     Reference: August 30th, 2011
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
55 days agozep1 zeaxanthin epoxidase1:
2.04
    Vallabhaneni, R; Wurtzel, E. 2009. Plant Physiol. 150:562-572     Reference: December 10th, 2011
Gene Product: December 10th, 2011
Variation: August 29th, 2011
55 days agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
 GRMZM2G012966
 Yan, Jianbing et al. 2010. Nature Genetics 42:322-327     Reference: May 3rd, 2010
Gene Product: December 10th, 2011
Variation: September 9th, 2008
Gene Model: October 3rd, 2011
55 days agops1 pink scutellum1: (aka vp7, lyc1, lycB) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush
5.04 - 5.04
    Stinard, PS; Jackson, JD. 2009. MNL 83:52     Reference: March 17th, 2011
Gene Product: December 10th, 2011
Variation: December 3rd, 2009
55 days agoy9 pale yellow9: pale endosperm, slightly viviparous; green to pale green seedlings and plants; accumulates 9,15,9'-tri-cis-zeta carotene in dark
10.03 - 10.03
 GRMZM2G011746
 Chen, Y et al. 2010. Plant Physiol 153:66-79     Reference: May 8th, 2010
Gene Product: December 10th, 2011
Variation: October 26th, 2007
Gene Model: September 22nd, 2011
55 days agozep2 zeaxanthin epoxidase2:
 
    Vallabhaneni, R; Wurtzel, E. 2009. Plant Physiol. 150:562-572     Reference: December 10th, 2011
Gene Product: December 10th, 2011
Variation: August 29th, 2011
55 days agodxs3 deoxy xylulose synthase3:
 
 GRMZM2G173641
 Vallabhaneni, R; Wurtzel, E. 2009. Plant Physiol. 150:562-572     Reference: December 10th, 2011
Gene Product: August 17th, 2004
Gene Model: December 9th, 2011
55 days agohds1 hydroxymethylbutenyl diphosphate synthase1:
 
 GRMZM2G137409
 Vallabhaneni, R; Wurtzel, E. 2009. Plant Physiol. 150:562-572     Reference: December 10th, 2011
Gene Product: December 10th, 2011
Gene Model: December 10th, 2011
55 days agohmdr1 hydroxymethylbutenyl diphosphate reductase1:
 
 GRMZM2G027059
 Vallabhaneni, R; Wurtzel, E. 2009. Plant Physiol. 150:562-572     Reference: December 10th, 2011
Gene Product: December 10th, 2011
Gene Model: December 10th, 2011
55 days agodxs1 deoxy xylulose synthase 1: leaf specific; function inferred from Medicago trunculata gene sequence and expression pattern (Walter 2002)
6.05
 GRMZM2G137151
 Vallabhaneni, R; Wurtzel, E. 2009. Plant Physiol. 150:562-572     Reference: December 10th, 2011
Gene Product: August 17th, 2004
Variation: June 24th, 2006
Gene Model: December 9th, 2011
55 days agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
 GRMZM2G493395
 Vallabhaneni, R; Wurtzel, E. 2009. Plant Physiol. 150:562-572     Reference: December 10th, 2011
Gene Product: August 17th, 2004
Gene Model: December 9th, 2011
55 days agodxr1 deoxy xylulose reductoisomerase1: enzyme catalyzes the first committed step of the plastidial pathway to apocarotenoids during mycorrhizal establishment
3.04
 GRMZM2G056975
 Vallabhaneni, R; Wurtzel, E. 2009. Plant Physiol. 150:562-572     Reference: December 10th, 2011
Gene Product: December 10th, 2011
Variation: May 11th, 2005
Gene Model: December 9th, 2011
63 days agovp10 viviparous10: yellow endosperm, colored aleurone, green seedlings, adherent
10.07
    Giulini, A et al. 2011. Plant Growth Regulation 64:99-108     Reference: December 2nd, 2011
Gene Product: February 22nd, 2007
Variation: June 5th, 2007
64 days agoaasr1 abscisic acid stress ripening1: protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044
10.02
 GRMZM2G136910
 Virlouvet, LC, et al. 2011. Plant Physiol. 157:917-936     Reference: November 4th, 2011
Gene Product: December 1st, 2011
Variation: September 1st, 2003
Gene Model: November 1st, 2011
64 days agoaasr2 abscisic acid stress ripening2:
2.05
 GRMZM5G854138
 Virlouvet, LC, et al. 2011. Plant Physiol. 157:917-936     Reference: November 4th, 2011
Gene Product: December 1st, 2011
Variation: September 1st, 2003
Gene Model: November 1st, 2011
64 days agobss1 bundle sheath strands specific1: encodes a photosynthesis-related protein with a deduced amino acid sequence with high homology to tomato Asr1 in the C-terminal region; stress-inducilible;
8.06
 GRMZM2G168552
 Virlouvet, LC, et al. 2011. Plant Physiol. 157:917-936     Reference: November 4th, 2011
Gene Product: December 1st, 2011
Variation: November 1st, 2011
Gene Model: November 1st, 2011
64 days agoaasr3 absicisic acid stress ripening3:
2.04
 GRMZM2G044132
 Virlouvet, LC, et al. 2011. Plant Physiol. 157:917-936     Reference: November 4th, 2011
Gene Product: December 1st, 2011
Gene Model: November 1st, 2011
65 days agoemp4 empty pericarp4: mitochondrion pentatricopeptide repeat (PPR) protein involved in specific expression of mitochondrial transcripts; impaired differentiation of basal endosperm transfer cells
1.10
 GRMZM2G092198
 Dolfini, S et al. 2007. J Exp Bot 58:1197-205   LOC_Os03g51840 (MSU/TIGR)
LOC_Os03g51840 (Gramene) 		Reference: November 30th, 2011
Gene Product: September 16th, 2009
Variation: September 19th, 2011
Gene Model: November 29th, 2011
66 days agoet*-N357C etchedN357C:
9.03 - 9.08
    Neuffer, MG. 1994. Personal communication     Reference: September 1st, 2003
Variation: November 29th, 2011
67 days agopgm1 phosphoglucomutase1: electrophoretic mobility; null allele is known; cytosolic; monomeric
1.09 - 1.10
 GRMZM2G023289
 Hoisington, DA and Coe, EH. 1990. Stadler Genet Symp 19:331-352     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 28th, 2011
67 days agopgm2 phosphoglucomutase2: electrophoretic mobility; null allele is known; cytosolic; monomeric
5.01
 GRMZM2G109383
 Weissinger, HH et al. 1979. Genetics 91:s136     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 28th, 2011
72 days agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
 GRMZM2G085381
 Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: October 14th, 2011
Variation: September 1st, 2003
Gene Model: October 14th, 2011
72 days agopsaB (cp) psaB:
 
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: September 1st, 2003
72 days agoglu2 beta-glucosidase2: cDNA produces higher activity in transgenic tobacco; shares 20 amino acids with an N-terminal sequence reported for membrane-bound beta-glucosidase
2.04
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
72 days agomfs18 male flower specific18: cDNA sequence, associated with tassel glume vascular bundles
3.04
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
72 days agorpl17 ribosomal protein L17: endosperm cDNA 5C05G01, similar to barley ribosomal protein
8.03
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: January 19th, 2006
Variation: September 1st, 2003
72 days agotps6 terpene synthase6:
10.03
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: September 3rd, 2008
Variation: September 3rd, 2008
72 days agoumi8 ustilago maydis induced8:
3.08
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Variation: April 17th, 2008
72 days agoumi11 ustilago maydis induced11:
7.00
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: January 19th, 2006
Variation: March 27th, 2007
72 days agoumi12 ustilago maydis induced12:
1.10
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: January 19th, 2006
Variation: April 17th, 2008
72 days agopco139502b  :
3.08
    Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: April 8th, 2011
Variation: April 17th, 2008
77 days agorul1 rum1-like1:
 
 GRMZM2G163848
 Wang, Yijun et al. 2010. Mol Biol Rep 37:3991-4001     Reference: November 10th, 2011
Variation: November 18th, 2011
Gene Model: November 17th, 2011
79 days agomet2 DNA methyl transferase2:
10.06
 GRMZM2G025592
 Garcia-Aguilar, M; Michaud, C; LeBlanc, O; Grimanelli, D. 2010. Plant Cell. 22:3249-3267     Reference: February 9th, 2011
Gene Product: September 1st, 2006
Variation: January 25th, 2011
Gene Model: November 16th, 2011
85 days agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
    Wang, Yijun et al. 2010. Mol Biol Rep 37:3991-4001     Reference: November 10th, 2011
Gene Product: November 1st, 2011
Variation: November 1st, 2011
86 days agoms27 male sterile27: description pending
 
    Albertsen, MC. 1996. MNL 70:30-31     Reference: September 1st, 2003
Variation: November 9th, 2011
87 days agoabph1 aberrant phyllotaxy1: decussate leaves and ear shoots (opposite at nodes) frequent; variable, recessive
2.03
    Lee, BH, et al. 2009. Plant Physiol. 150:205-16     Reference: January 5th, 2010
Gene Product: April 20th, 2009
Variation: November 8th, 2011
88 days agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
 GRMZM2G081554
 Schmelz, EA et al. 2011. Proc Natl Acad Sci, USA 108:5455-5460     Reference: September 15th, 2011
Gene Product: September 16th, 2011
Variation: September 1st, 2003
Gene Model: November 7th, 2011
91 days agoaasr5 abscisic acid stress ripening5:
10.04
 GRMZM2G052100
 Virlouvet, LC, et al. 2011. Plant Physiol. 157:917-936     Reference: November 4th, 2011
Gene Product: November 4th, 2011
Variation: April 14th, 2007
Gene Model: November 1st, 2011
3 months agopan1 pangloss1: Defines polarization in divisions of subsidiary mother cells at guard cells
 
 GRMZM5G836190
 Humphries, JA, et al. 2011. Plant Cell. 23:2273-84     Reference: October 11th, 2011
Variation: November 6th, 2010
Gene Model: November 2nd, 2011
3 months agorop2 Rho-related protein from plants2: ROP2 protein interacts with PAN1 to polaize asymmetric cell division; SSR umc1699
4.10
 GRMZM5G846811
 Humphries, JA, et al. 2011. Plant Cell. 23:2273-84     Reference: October 11th, 2011
Gene Product: April 1st, 2004
Variation: January 25th, 2011
Gene Model: November 2nd, 2011
3 months agorop9 Rho-related protein from plants 9: ROP9 protein interact with PAN1 to polarize asymmetric cell division
5.03
 GRMZM5G803949
 Humphries, JA, et al. 2011. Plant Cell. 23:2273-84     Reference: October 11th, 2011
Gene Product: April 1st, 2004
Gene Model: November 2nd, 2011
3 months agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
    Xu, XM, et al. 2011. Science. 333:1141-1144     Reference: November 1st, 2011
Variation: September 1st, 2003
3 months agoasr1 absence of seminal roots1: dominant Asr1 seedlings lack seminal roots
4.01 - 4.02
    Miranda, LTde. 1980. MNL 54:18-19     Reference: September 1st, 2003
Variation: November 1st, 2011
3 months agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
 GRMZM2G101511
 Preston, J; Wang, H; Kursel, L; Doebley, JF; Kellogg, EA. 2011. New Phytol. 0:epub     Reference: October 31st, 2011
Variation: September 1st, 2003
Gene Model: October 28th, 2011
3 months agobx7 benzoxazinone synthesis7: cytosolic O-methyl transferase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc2039, INDEL IDP478.
4.03
 GRMZM2G441753
 Frey, M et al. 2003. A 2-oxoglutarate-dependent dioxygenase is integrated in DIMBOA-biosynthesis. Phytochemistry 62:371-376     Reference: October 25th, 2011
Gene Product: October 31st, 2011
Variation: October 26th, 2011
Gene Model: October 19th, 2011
3 months agobx8 benzoxazinone synthesis8: cytosolic glucosyltransferase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
4.01
 GRMZM2G085054
 Osbourn, A. 2010. Plant Physiol. 154:531-5     Reference: October 25th, 2011
Gene Product: October 20th, 2011
Variation: October 31st, 2011
Gene Model: October 20th, 2011
3 months agobx9 benzoxazinone synthesis9: cytosolic glucosyl transferase; redundant with bx8; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
1.06
 GRMZM2G161335
 Sicker, D; Frey, M; Schulz, M; Gierl, A. 2000. Int Rev Cytol. 198:319-46     Reference: October 25th, 2011
Gene Product: October 20th, 2011
Variation: October 27th, 2011
Gene Model: October 20th, 2011
3 months agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
    Osbourn, A. 2010. Plant Physiol. 154:531-5     Reference: October 25th, 2011
Gene Product: October 26th, 2011
Variation: October 19th, 2011
3 months agomop1 mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I
2.04
    McGinnis, K et al. 2006. Genetics 173:1637-1647     Reference: October 25th, 2011
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Recommended by Ed Coe:
January 8th, 2008
3 months agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
 GRMZM2G172491
 Osbourn, A. 2010. Plant Physiol. 154:531-5     Reference: October 25th, 2011
Gene Product: October 24th, 2011
Variation: September 1st, 2003
Gene Model: October 24th, 2011
3 months agob1 colored plant1: dominant B1 plants have anthocyanin in major plant tissues; some alleles affect aleurone and embryo color; regulates flavonoid enzymes; SSR umc1776
2.03
 GRMZM2G172795
 McGinnis, K et al. 2006. Genetics 173:1637-1647     Reference: October 25th, 2011
Gene Product: October 13th, 2010
Variation: September 1st, 2003
Gene Model: September 22nd, 2011
3 months agoglu1 beta glucosidase1: electrophoretic mobility; plastidic; dimeric; intralocus hybrid bands occur
10.03
    Czjzek, M et al. 2000. Proc Natl Acad Sci, USA 97:13555-13560     Reference: October 25th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
    Kubo, Akiko et al. 2010. Plant Physiol 153:956-969     Reference: June 3rd, 2011
Gene Product: October 25th, 2011
Variation: September 1st, 2003
3 months agozpu1 pullulanase-type starch debranching enzyme1: single copy, cDNA clone similar to rice sequence; SSR umc1003The zpu1 gene encodes a pullulanase-type starch debranching enzyme. Analysis of plants homozygous for the zpu1-204 mutation reveal the genes role in starch catabolism. zpu1-204 endosperm accumulate maltooligosaccharides not found in wild type plants. zpu1-204 are also deficient for linear maltooligosaccharides.
2.05
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: October 25th, 2011
Variation: September 1st, 2003
3 months agormr1 required to maintain repression1:
6.07
    McGinnis, K et al. 2006. Genetics 173:1637-1647     Reference: October 25th, 2011
Gene Product: April 30th, 2008
Variation: April 30th, 2008
3 months agormr2 required to maintain repression 2:
 
    McGinnis, K et al. 2006. Genetics 173:1637-1647     Reference: October 25th, 2011
Variation: January 8th, 2010
3 months agobx3 benzoxazinone synthesis3: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1017
4.01
 GRMZM2G167549
 Osbourn, A. 2010. Plant Physiol. 154:531-5     Reference: October 25th, 2011
Gene Product: October 19th, 2011
Variation: September 1st, 2003
Gene Model: October 24th, 2011
3 months agobx5 benzoxazinone synthesis5: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1276.
4.01
 GRMZM2G063756
 Osbourn, A. 2010. Plant Physiol. 154:531-5     Reference: October 25th, 2011
Gene Product: October 24th, 2011
Variation: September 1st, 2003
Gene Model: October 24th, 2011
3 months agobx2 benzoxazinone synthesis2: endoplasmic reticulum P450 monoxygenase; synthesis cyclic hyroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1164, umc1682
4.01
 GRMZM2G085661
 Osbourn, A. 2010. Plant Physiol. 154:531-5     Reference: October 25th, 2011
Gene Product: October 19th, 2011
Variation: June 2nd, 2006
Gene Model: October 24th, 2011
3 months agoiso3 isoamylase-type starch debranching enzyme3:
 
    Dinges, JR; Colleoni, C; James, MG; Myers, AM. 2003. Plant Cell. 15:666-680     Reference: June 3rd, 2011
Gene Product: October 25th, 2011
Variation: October 8th, 2010
3 months agosu4 sugary4: duplicate factor: in combination with su3 gives sugary endosperm phenotype.
6.05
 GRMZM2G090905
 Kubo, Akiko et al. 2010. Plant Physiol 153:956-969     Reference: June 3rd, 2011
Gene Product: October 25th, 2011
Variation: June 3rd, 2011
Gene Model: October 24th, 2011
3 months agobgaf1 beta glucosidase aggregating factor1:
7.02
 GRMZM2G172204
 Yu, H et al. 2009. Biochemistry 48:2924-32     Reference: October 24th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 24th, 2011
3 months agotsa1 tryptophan synthase alpha subunit1: With products of orp1 and orp2 genes, forms tryptophan synthase. Plastidic.
 
 GRMZM5G841619
 Frey, M et al. 2009. Phytochemistry 70:1645-51     Reference: October 24th, 2011
Gene Product: October 21st, 2011
Gene Model: October 14th, 2011
3 months agoigl1 indole-3-glycerol phosphate lyase1: mRNA production induced by volicitin, forms free indole
1.11
 GRMZM2G046163
 DUP. Frey, M et al. 2009. Phytochemistry 70:1645-1651     Reference: October 24th, 2011
Gene Product: October 14th, 2011
Variation: February 17th, 2007
Gene Model: October 14th, 2011
3 months agocenH3 centromeric histone H3:
6.06
 GRMZM2G158526
 Jin, W, et al. 2005. Plant Cell. 17:1412-1423     Reference: May 14th, 2011
Gene Product: June 24th, 2005
Gene Model: October 24th, 2011
3 months agoga2 gametophyte factor2: Ga2 pollen grains are competitively superior to ga2 on Ga2 silks.
5.04
    Kermicle, J; Evans, MMS. 2010. J Hered 101:737-749     Reference: October 17th, 2011
Variation: October 17th, 2011
3 months agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
    Chuck, G, et al. 2011. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1113971108     Reference: October 14th, 2011
Gene Product: October 4th, 2010
Variation: September 1st, 2003
Recommended by George Chuck:
September 25th, 2007
3 months agotsh5 tassel sheath5:
 
    Whipple, C, et al. 2010. Plant Cell. 22:565-578     Reference: June 26th, 2010
Variation: October 11th, 2011
3 months agocps2 chloroplast protein synthesis2: 20-fold reduced RUBISCO, 2-fold reduced thylakoid polypeptides, decreased chloroplast polysomes (aka hcf133)
6.01 - 6.08
 AC215201.3_FG005
 Barkan, A. 2011. 0:1     Reference: October 11th, 2011
Gene Product: October 3rd, 2011
Variation: September 1st, 2003
Gene Model: September 6th, 2011
3 months agopet3 photosynthetic electron transport3: This gene creates a product required for cytochrome b6f accumulation. Mu tagging and cloning finds this loci to be gene model GRMZM2G177145, which has sequence similarity to CCB4 ortholog (heme assembly), Barkan, 2011lacks cytochrome bf polypeptides; likely allelic to hcf6
 
 GRMZM2G177145
 Barkan, A. 2011. 0:1     Reference: October 11th, 2011
Variation: September 1st, 2003
Gene Model: September 6th, 2011
3 months agocps1 chloroplast protein synthesis1: reduced levels of RUBISCO and all thylakoid membrane complexes; unaltered chloroplast mRNA; decreased chloroplast polysomes
1.06 - 1.12
 GRMZM2G156565
 Barkan, A. 2011. 0:1     Reference: October 11th, 2011
Gene Product: October 3rd, 2011
Variation: September 1st, 2003
Gene Model: September 6th, 2011
3 months agosbp2 SBP-domain protein2: cDNA sequence; SSR's umc1573, umc1574, umc1623
4.09
    Cardon, G et al. 1999. Gene 237:91-104     Reference: September 1st, 2003
Gene Product: October 7th, 2011
Variation: October 8th, 2011
3 months agosbp5 SBP-domain protein5:
 
    Cardon, G et al. 1999. Gene 237:91-104     Reference: September 1st, 2003
Gene Product: October 7th, 2011
Variation: October 8th, 2011
3 months agotsh4 tassel sheath4: tsh4 mutant tassels have one to five long tassel branches, instead of ~13 observed in non-mutant W22. In place of tassel branches, long bract leaves were present, clustered at the base of the tassel.
7.03
 GRMZM2G307588
 Chuck, G; Whipple, C; Jackson, D; Hake, S. 2010. Development. 137:1243-50     Reference: October 4th, 2010
Gene Product: October 8th, 2011
Variation: October 6th, 2011
Gene Model: October 6th, 2011
3 months agosbp7 SBP-domain protein7:
 
    Cardon, G et al. 1999. Gene 237:91-104     Reference: September 1st, 2003
Gene Product: October 7th, 2011
Variation: October 8th, 2011
3 months agosbp1 SBP-domain protein1: cDNA sequence, SSR's umc1575, umc1624
5.04
        Gene Product: October 7th, 2011
Variation: October 8th, 2011
3 months agosbp3 SBP-domain protein3: cDNA sequence with SSR's umc1572, umc1595
6.02
    Cardon, G et al. 1999. Gene 237:91-104     Reference: September 1st, 2003
Gene Product: October 7th, 2011
Variation: September 1st, 2003
3 months agosbp4 SBP-domain protein4: cDNA sequence includes SSR's umc1571 and umc1570
9.03
    Cardon, G et al. 1999. Gene 237:91-104     Reference: September 1st, 2003
Gene Product: October 7th, 2011
Variation: September 1st, 2003
4 months agotsh2 tassel sheath2: The mutant was identified in a screen for the presences of bracts subtending tassel long branches and of the spikelet pairs of both the ear and tassel (normally these bracts are repressed and thus not present). However, bracts subtending either the sessile or pedicellate spikelet are absent, as in normal plants. Tassel branching it also reduced. The tsh2 mutant is recessive.
 
    Whipple, C, et al. 2010. Plant Cell. 22:565-578     Reference: June 26th, 2010
Variation: October 6th, 2011
4 months agotsh3 tassel sheath3:
 
    Vollbrecht, E; Schmidt, RJ pp.13-40 in Bennetzen, J; Hake, S. (eds) 2009 (vol1). Springer-Verlag, NY     Reference: August 21st, 2010
Variation: October 6th, 2011
4 months agotsh1 tassel sheath1: leaves develop at base of tassel branches and spikelet pairstsh1 was positionally cloned by Whipple et al, 2010. It was initially mapped between umc2059 and bnlg1740. The position was narrowed using a larger population, synteny with rice provided two candidate genes, one was selected based on sequencing differences from progenitors for three independent EMS alleles.
6.07
    Whipple, C, et al. 2010. Plant Cell. 22:565-578     Reference: June 26th, 2010
Gene Product: April 28th, 2010
Variation: October 6th, 2011
4 months agoij1 iojap striping1: many variable white stripes and margin patterns on leaves (compare cm1); conditions chloroplast defects that are cytoplasmically inherited
7.03
    Han, CD; Derby, RJ; Schnable, PS; Martienssen, RA. 1995. Maydica 40:13-22     Reference: October 5th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
4 months agow1 white seedling1: white seedling (yellow with l1), germinates normally; plastid transcripts variously aberrant
6.05
    Han, CD; Derby, RJ; Schnable, PS; Martienssen, RA. 1995. Maydica 40:13-22     Reference: October 5th, 2011
Variation: September 1st, 2003
4 months agow3 white seedling3: like vp2; w3-8686 pale endosperm, pale green seedling in dim light
2.08 - 2.07
    Han, CD; Derby, RJ; Schnable, PS; Martienssen, RA. 1995. Maydica 40:13-22     Reference: October 5th, 2011
Gene Product: September 1st, 2003
Variation: September 26th, 2008
4 months agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
 GRMZM2G059037
 Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
LOC_Os05g50410 (Gramene) 		Reference: September 28th, 2011
Gene Product: July 30th, 2009
Variation: August 12th, 2011
Gene Model: July 14th, 2011
4 months agoam1 ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle
5.02
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: October 6th, 2009
4 months agoas1 asynaptic1: synaptic failure in male and female
1.05
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: September 1st, 2003
4 months agodsy2 desynaptic2: synapsis and recombination reduced; RAD51 complexes abnormal
5.03 - 5.04
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: May 20th, 2006
4 months agodv1 divergent spindle1: chromosomes unoriented at metaphase I; partial male and female sterility
 
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: May 21st, 2010
4 months agody1 desynaptic1: partial to complete male and female sterility; chromosomes separate after synapsis
 
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: September 1st, 2003
4 months agoel1 elongate1: chromosomes uncoiled during meiotic metaphase and anaphase in male and female; frequent unreduced gametes
8.04 - 8.09
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Gene Product: January 3rd, 2006
Variation: September 1st, 2003
4 months agomei1 meiosis1: male sterile with dominant Mei1, chromatin hyper-condensed, chromosomes sticky in metaphase I and anaphase I
5.00
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: June 29th, 2005
4 months agoms28 male sterile28: anaphase I disturbed, spindle persists
1.00 - 1.05
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: September 1st, 2003
4 months agoms43 male sterile43: anaphase I impaired (aka ms29)
8.05 - 8.09
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: September 1st, 2003
4 months agopam1 plural abnormalities of meiosis1: desynchronized meiotic divisions and premeiotic mitosis; male sterile, incompletely female sterile
1.05
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: September 1st, 2003
4 months agopo1 polymitotic1: (aka ms4, ms6) repeats 2nd meiotic division in male and female
6.01 - 6.01
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: May 20th, 2006
4 months agost1 sticky chromosome1: small plant, striate leaves, pitted kernels resulting from sticky chromosomes; st1-e heightened by high temperature
4.03 - 4.04
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: June 17th, 2008
4 months agova1 variable sterile1: variable male and female fertility; cytokinesis fails in anaphase I
7.03
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: September 1st, 2003
4 months agocop2 coatomer protein2: cDNA
10.07
        Gene Product: September 1st, 2003
Variation: September 28th, 2011
4 months agomac1 multiple archesporial cells1: (was lar*-487) several archesporial cells undergo normal meiosis; plants partially female sterile but completely male sterileBeware: this locus could accidentally be confused with the act1 (actin 1) locus, which also was called MAc1 in past publications!
10.03
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: September 1st, 2003
4 months agosgo1 shugoshin centromeric cohesion1: male and female sterile; meiosis; centromere cohesion; segregation of sister chromatids.
7.02
 GRMZM2G074082
 Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Gene Product: July 29th, 2009
Variation: July 29th, 2004
Gene Model: July 14th, 2011
4 months agophs1 poor homologous synapsis1: affects homology search
9.00
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Gene Product: September 5th, 2006
Variation: May 28th, 2011
4 months agoseg2 segregation2: exhibits abnormal homologous synapsis
 
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Variation: August 11th, 2011
4 months agorad51b recombination protein51 gene b: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
3.05
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Gene Product: June 30th, 2005
Variation: February 24th, 2007
4 months agorad51a recombination protein51 gene a: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
7.04
    Cande, WZ; Freeling, M. 2011. Genetics. 188:491-8     Reference: September 28th, 2011
Gene Product: June 30th, 2005
Variation: May 21st, 2005
4 months agoP plant color component at R1: anthocyanin pigmentation in seedling leaf tip, coleoptile, anthers
 
 GRMZM5G822829
 Robbins, TP et al. 1991. Genetics 129:271-283     Reference: December 3rd, 2009
Gene Product: October 13th, 2010
Variation: December 3rd, 2009
Gene Model: September 23rd, 2011
4 months agopr1 red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
5.05
 GRMZM2G025832
 Sharma, M, et al. 2011. Genetics. 188:69-79     Reference: June 10th, 2011
Gene Product: June 3rd, 2011
Variation: September 1st, 2003
Gene Model: September 22nd, 2011
4 months agocpx2 coproporphyrinogen III oxidase2: duplicate to cpx1
10.06
 GRMZM2G032282
 Williams, P; Hardeman, K; Fowler, J; Rivin, C. 2006. Plant J. 45:727-739     Reference: September 22nd, 2011
Gene Product: September 1st, 2003
Variation: June 29th, 2005
Gene Model: September 22nd, 2011
4 months agocpx1 coproporphyrinogen III oxidase1: (was dks8) duplicate to cpx2; recessive eliminates development of the shoot pole during embryogenesis
2.02
    Williams, P; Hardeman, K; Fowler, J; Rivin, C. 2006. Plant J. 45:727-739     Reference: September 22nd, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
4 months agoemp3 empty pericarp3: small, extremely collapsed, defective, poorly viable kernel
8.08 - 8.08
    England, DJ and Neuffer, MG. 1987. MNL 61:51     Reference: October 26th, 2004
Variation: September 19th, 2011
4 months agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
 GRMZM2G044481
 Schmelz, EA et al. 2011. Proc Natl Acad Sci, USA 108:5455-5460     Reference: September 15th, 2011
Gene Product: September 16th, 2011
Variation: September 15th, 2011
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
4 months agoptac12 plastid transcriptionally active chromosome 12 homolog: chloroplast transcription; mutants are pale green seedling lethals
 
 GRMZM2G005938
 Williams-Carrier, R, et al. 2010. Plant J. 63:167-177   LOC_Os08g09270 (MSU/TIGR)
LOC_Os08g09270 (Gramene) 		Reference: September 13th, 2011
Variation: April 21st, 2011
Gene Model: April 12th, 2011
4 months agopet2 photosynthetic electron transport2: lacks cytochrome bf polypeptides
 
 GRMZM2G087063
 Williams-Carrier, R, et al. 2010. Plant J. 63:167-177   At5g52110 (TAIR)
LOC_Os10g37840 (MSU/TIGR)
LOC_Os10g37840 (Gramene) 		Reference: September 13th, 2011
Gene Product: April 19th, 2011
Variation: April 19th, 2011
Gene Model: April 19th, 2011
4 months agotha5 thylakoid assembly5:
 
 GRMZM2G300408
 Williams-Carrier, R, et al. 2010. Plant J. 63:167-177   AT4G14870 (TAIR)
LOC_Os08g30830 (MSU/TIGR)
LOC_Os08g30830 (Gramene) 		Reference: September 13th, 2011
Gene Product: April 21st, 2011
Variation: August 26th, 2010
Gene Model: April 12th, 2011
4 months agocrp4 chloroplast RNA processing4: chloroplast RNA processing and turnover; INDEL probe TIDP3337.
 
 GRMZM2G377761
 Williams-Carrier, R, et al. 2010. Plant J. 63:167-177   AT3G03710 (TAIR)
LOC_Os07g07310 (MSU/TIGR)
LOC_Os07g07310 (Gramene) 		Reference: September 13th, 2011
Gene Product: April 12th, 2011
Variation: April 21st, 2011
Gene Model: April 12th, 2011
4 months agoa1 anthocyaninless1: colorless aleurone, green or brown plant; brown pericarp with P1-rr
3.09
    McClintock, B. 1968. Carnegie Inst Wash Yearbook 66:20-28     Reference: September 8th, 2011
Gene Product: October 13th, 2010
Variation: September 1st, 2003
5 months agonced5 nine-cis-epoxycarotenoid dioxygenase5:
 
    Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: February 22nd, 2007
Variation: September 1st, 2011
5 months agoabh1 abscisic acid 8'-hydroxylase1:
 
    Li, F et al. 2008. Plant Physiol 146:1333-1345     Reference: August 25th, 2011
Gene Product: September 1st, 2011
Variation: September 1st, 2011
5 months agoabh2 abscisic acid 8'-hydroxylase2:
 
    Li, F et al. 2008. Plant Physiol 146:1333-1345     Reference: August 25th, 2011
Gene Product: September 1st, 2011
Variation: September 1st, 2011
5 months agovp14 viviparous14: viviparous; yellow endosperm; SSR umc1218
1.08
 GRMZM2G014392
 Li, F et al. 2008. Plant Physiol 146:1333-1345     Reference: August 25th, 2011
Gene Product: February 22nd, 2007
Variation: June 25th, 2007
Gene Model: May 13th, 2011
5 months agoal1 albescent plant1: variably cross-banded to white leaves, pale yellow endosperm, some alleles viviparous; y3 is allelic
2.01
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Variation: April 11th, 2011
5 months agof1 fine stripe1: virescent seedling, fine white stripes on base and margin of older leaves
1.07
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Variation: September 1st, 2003
5 months agog2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Gene Product: September 5th, 2006
Variation: September 1st, 2003
5 months agov12 virescent12: like v3
5.05 - 5.06
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Variation: September 1st, 2003
5 months agov13 virescent13: first leaf with green tip; greens slowly
5.00 - 5.04
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Variation: September 1st, 2003
5 months agov16 virescent16: like v2; deficiency of chloroplastic 16S and 23S rRNA
8.06
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Variation: September 1st, 2003
5 months agov17 virescent17: like v1, but greening from base to tip
4.04 - 4.05
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Variation: September 1st, 2003
5 months agov18 virescent18: like v1
10.06 - 10.07
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Variation: September 1st, 2003
5 months agoyg2 yellow-green2: like yg1; complements pyd1 but not wd1
9.00
    Phipps, IF. 1929. Cornell Univ Agric Exp Stn Memoir 125:1-63     Reference: August 23rd, 2011
Variation: December 17th, 2010
5 months agoprp5 pathogenesis related protein5:
1.06
    Chintamanani, S; Hulbert, S; Johal, GS; Balint-Kurti, P. 2010. Genetics. 184:813-825     Reference: August 5th, 2011
Variation: August 20th, 2011
5 months agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialism
1.04
    Whipple, C, Kebrom TH, Weber AL, Yang F, Hall D, Meeley R, Schmidt R, Doebley J, Brutnell TP, Jackson DP 2011. Proc Natl Acad Sci, USA 108:doi: 10.1073/pnas.1102819108     Reference: August 18th, 2011
Variation: August 18th, 2011
5 months agocrs2 chloroplast RNA splicing2: albino to very pale green seedling lethals; chloroplastic group II intron splicing
8.02
 GRMZM2G132021
 Ostheimer, G; Hadjivassiliou, H; Kloer, DP; Barkan, A; Matthews, B. 2005. J Mol Biol. 345:51-69   AT5G16140 (TAIR)
LOC_Os01g04130 (MSU/TIGR)
LOC_Os01g04130 (Gramene) 		Reference: March 6th, 2010
Gene Product: June 21st, 2005
Variation: August 16th, 2011
Gene Model: July 15th, 2011
5 months agoba1 barren stalk1: ear shoots and most tassel branches and spikelets absent
3.06
    Gallavotti, A et al. 2011. Plant Cell 23:1756-1771     Reference: August 15th, 2011
Gene Product: July 28th, 2005
Variation: September 1st, 2003
5 months agobaf1 barren stalk fastigiate1: ear shoots often absent, or distorted and fused to culm at base; tassel branches erect, bundled, fused to culm at base
9.02
    Gallavotti, A et al. 2011. Plant Cell 23:1756-1771     Reference: August 15th, 2011
Variation: September 1st, 2003
5 months agotdy1 tie-dyed1: Leaf blades develop variegated chlorotic and green regions; chlorotic regions hyperaccumulate carbohydrates.(Braun 2008)
6.07
 GRMZM2G321778
 Ma, Y et al. 2009. Plant Physiol 149:181-194     Reference: May 20th, 2011
Variation: August 13th, 2011
Gene Model: July 14th, 2011
5 months agowhy1 whirly1: albino to pale green seedling lethal, plastid ribosome deficient
6.01
 GRMZM2G155662
 Melonek, J et al. 2010. Planta 232:471-481   AT1G14410 (TAIR)
LOC_Os0605350 (MSU/TIGR)
LOC_Os0605350 (Gramene) 		Reference: May 20th, 2011
Gene Product: July 22nd, 2009
Variation: August 12th, 2011
Gene Model: July 14th, 2011
5 months agocaf2 crs2 associated factor2: ivory colored leaf, seedling lethal; RNA splicing
3.04
 AC199526.5_FG003
 Barkan, A. 2009. maize gene review DOI-caf2:unassigned   AT1G23400 (TAIR)
LOC_Os01g21990 (MSU/TIGR)
LOC_Os01g21990 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 23rd, 2009
Variation: August 12th, 2011
Gene Model: July 14th, 2011
5 months agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
 GRMZM2G144744
 Camus-Kulandaivelu, L, et al. 2008. Genetics. 180:1107-1121     Reference: August 11th, 2011
Gene Product: February 12th, 2007
Variation: August 30th, 2007
Gene Model: May 11th, 2011
6 months agoppr5 pentatricopeptide repeat 5: stabilizes the chloroplast unspliced trnG precursor
4.08
 GRMZM2G155662
 Barkan, A. 2009. maize gene review DOI-ppr5:unassigned   AT4G39620 (TAIR)
LOC_Os02g51480 (MSU/TIGR)
LOC_Os02g51480 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 22nd, 2009
Variation: August 5th, 2011
Gene Model: July 14th, 2011
Recommended by Alice Barkan:
November 11th, 2008
6 months agohm2 Helminthosporium carbonum susceptibility2: dominant Hm2 plants resistant to Cochliobolus carbonum; like Hm1, masked by Hm1
9.03 - 9.04
    Chintamanani, S; Multani, DS; Ruess, H; Johal, G. 2008. Mol Plant-Microbe Interact. 21:79-86     Reference: August 5th, 2011
Variation: September 1st, 2003
6 months agoprp1 pathogenesis-related protein1: cDNA clone, single copy, deduced protein product is basic (vs. acidic), normally accumulates during germination,induced by fungal elicitors but not wounding
8.03
    Chintamanani, S; Hulbert, S; Johal, GS; Balint-Kurti, P. 2010. Genetics. 184:813-825     Reference: August 5th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
6 months agowip1 wound induced protein1: wounding-induced transcript, cDNA clone (601bp) sequenced; homologous to Bowman-Birk proteinase inhibitors
8.01
    Chintamanani, S; Hulbert, S; Johal, GS; Balint-Kurti, P. 2010. Genetics. 184:813-825     Reference: August 5th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
6 months agoprp4 pathogenesis related protein4:
7.00
    Chintamanani, S; Hulbert, S; Johal, GS; Balint-Kurti, P. 2010. Genetics. 184:813-825     Reference: August 5th, 2011
Variation: August 4th, 2008
6 months agogbss1b granule-bound starch synthase1b:
 
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Variation: August 4th, 2011
6 months agotub6b beta tubulin6b: cDNA sequence, gene specific probe
3.06
    Villemur, R; Haas, NA; Joyce, CM; Snustad, DP; Silflow, CD. 1994. Plant Mol Biol 24:295-315     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 4th, 2011
6 months agosbe3 starch branching enzyme3:
8.06
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: June 6th, 2011
Variation: August 3rd, 2011
6 months agona3 nana3: short plant with erect stiff leaves, like na1
4.05
    Neuffer, MG and England, DJ. 1995. MNL 69:43-46     Reference: September 1st, 2003
Variation: August 2nd, 2011
6 months agokin1 knotted1 induced1:
7.06
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Variation: August 1st, 2011
6 months agosee2a senescence enhanced2a:
 
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Variation: August 1st, 2011
6 months agosee2b senescence enhanced2b:
 
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Variation: August 1st, 2011
6 months agomir3 maize insect resistance3:
 
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Variation: August 1st, 2011
6 months agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
    Yi, GH et al. 2011. Plant Physiol 0: doi: 10.1104/pp.111.177725     Reference: July 28th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
6 months agocaf1 crs2 associated factor1: ivory to very pale yellow leaf, seedling lethal, chloroplast intron II splicing
7.02
 GRMZM2G083950
 Barkan, A. 2009. maize gene review DOI-caf1:unassigned   AT2G20020 (TAIR)
LOC_Os01g31110 (MSU/TIGR)
LOC_Os01g31110 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 23rd, 2009
Variation: July 23rd, 2011
Gene Model: July 14th, 2011
6 months agoscm1 self-colored marbled1: colored aleurone component of R1-mb
10.06
    Panavas, T et al. 1999. Genetics 153:979-991     Reference: July 16th, 2011
Variation: September 1st, 2003
6 months agolcm1 Lc similarity at Marbled1: component of R1-mb - sequence similar to Lc1 or P components, but without their plant color effects
10.06
    Panavas, T et al. 1999. Genetics 153:979-991     Reference: July 16th, 2011
Variation: September 1st, 2003
6 months agolcm2 Lc similarity at Marbled2: component of R1-mb - sequence similar to Lc1 or P components, but without their plant color effects
10.06
    Panavas, T et al. 1999. Genetics 153:979-991     Reference: July 16th, 2011
Variation: September 1st, 2003
6 months agowtf1 what's this factor1: chloroplast group II intron splicing
8.03
 GRMZM2G403797
 Barkan, A. 2009. maize gene review DOI-wtf1:unassigned   AT4G01037 (TAIR)
LOC_Os05g49610 (MSU/TIGR)
LOC_Os05g49610 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 21st, 2009
Variation: May 9th, 2009
Gene Model: July 15th, 2011
Recommended by Alice Barkan:
November 11th, 2008
6 months agocrs4 chloroplast RNA splicing4: pale yellow green seedling lethal; splicing of ndhA and ndhB transcprits
 
 GRMZM2G481231
 Barkan, A. 2009. maize gene review DOI-crs4:unassigned     Reference: November 17th, 2009
Gene Product: July 24th, 2009
Variation: July 24th, 2009
Gene Model: July 15th, 2011
6 months agotha8 thylakoid assembly8:
2.06
 AC217965.2_FG012
     Variation: July 22nd, 2009
Gene Model: July 15th, 2011
6 months agoppr10 pentatricopeptide repeat10: pale yellow green, non-photosynthesizing seedling lethal; atpH and psaJ mRNA stabilization
6.02
 GRMZM2G177169
 Barkan, A. 2009. maize gene review DOI-ppr10:unassigned   AT2G18940 (TAIR)
LOC_Os05g19380 (MSU/TIGR)
LOC_Os05g19380 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 22nd, 2009
Variation: July 23rd, 2009
Gene Model: July 14th, 2011
Recommended by Alice Barkan:
November 11th, 2008
6 months agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
 GRMZM5G862109
 Chuck, G. 2009. maize gene review DOI:unassigned     Reference: November 17th, 2009
Gene Product: July 24th, 2009
Variation: February 7th, 2009
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
6 months agocrs1 chloroplast RNA splicing1: pale green seedling lethal; chloroplast ATP synthase null; promotes atpF intron splicing
1.07
 GRMZM2G078412
 Barkan, A. 2009. maize gene review DOI-crs1:unassigned   AT5G16180 (TAIR)
LOC_Os08g27150 (MSU/TIGR)
LOC_Os08g27150 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 22nd, 2009
Variation: July 22nd, 2009
Gene Model: July 14th, 2011
6 months agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
 GRMZM2G307119
 Chuck, G; Whipple, C; Jackson, D; Hake, S. 2010. Development. 137:1243-50   At5g18560 (TAIR)
LOC_Os07g47330 (MSU/TIGR)
LOC_Os01g21820 (Gramene) 		Reference: October 4th, 2010
Gene Product: July 27th, 2009
Variation: September 1st, 2003
Gene Model: July 14th, 2011
6 months agora2 ramosa2: tassel many-branched, upright, not conical like ra1; irregular kernel placement
3.03 - 3.03
 AC233943.1_FG002
 Gallavotti, A, et al. 2010. Development. 137:2849-56   AT5G63090 (TAIR)
LOC_Os01g07480 (MSU/TIGR)
LOC_Os01g07480 (Gramene) 		Reference: August 20th, 2010
Gene Product: July 27th, 2009
Variation: July 27th, 2009
Gene Model: July 14th, 2011
6 months agoppr2 pentatricopeptide repeat 2: albino seedling lethal; chloroplast translation
7.00
 GRMZM2G341621
 Barkan, A. 2009. maize gene review DOI-ppr2:unassigned   AT3G06430 (TAIR)
LOC_Os03g19650 (MSU/TIGR)
LOC_Os03g19650 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 23rd, 2009
Variation: February 18th, 2004
Gene Model: July 14th, 2011
6 months agotha4 thylakoid assembly4: pale green seedling lethal; thlakoid protein targeting: tat pathway
1.08
 GRMZM2G472651
 Barkan, A. 2009. maize gene review DOI:unassigned   AT5G28750 (TAIR)
LOC_Os03g43430 (MSU/TIGR)
LOC_Os03g43430 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 22nd, 2009
Variation: July 22nd, 2009
Gene Model: July 14th, 2011
6 months agornc1 ribonuclease III domain protein1: albino to pale green seedling lethal; RNA splicing
3.06
 GRMZM2G035820
 Barkan, A. 2009. maize gene review DOI-rnc1:unassigned   AT4G37510 (TAIR)
LOC_Os01g5951 (MSU/TIGR)
LOC_Os01g5951 (Gramene) 		Reference: November 17th, 2009
Gene Product: July 22nd, 2009
Variation: March 31st, 2005
Gene Model: July 14th, 2011
6 months agome1 NADP malic enzyme1: coleoptilar, electrophoretic mobility; null allele is known; tetrameric
3.04 - 3.07
    Goodman, MM et al. 1980. Genetics 96:697-710     Reference: September 1st, 2003
Gene Product: July 12th, 2011
6 months agome3 NADP malic enzyme3: chloroplast C4-photosynthesis, delivers CO2 to ribulose bisphosphate carboylase
3.02
    Keith, CS et al. 1993. Plant Physiol 101:329-332     Reference: September 1st, 2003
Gene Product: July 12th, 2011
Variation: October 15th, 2010
6 months agome4 NADP malic enzyme4: Embryo and root specific
 
    Detarsio, E et al. 2008. Plant Mol Biol 68:355-367     Reference: July 12th, 2011
Gene Product: July 12th, 2011
Variation: October 15th, 2010
7 months agoknox3 knotted related homeobox3: shoot meristem and developing stem specific, very similar in sequence and expression pattern to rs1, kn1, knox4 and knox8
1.10
    Evans, M. 2007. Plant Cell. 19:46-62     Reference: October 1st, 2010
Gene Product: September 1st, 2003
Variation: July 2nd, 2011
7 months agowhp1 white pollen1: duplicate factor with c2 for pollen color and for anthocyanins
2.08
    Mo, YY et al. 1992. Proc Natl Acad Sci, USA 89:7213-7217     Reference: June 22nd, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
7 months agodhn3 dehydrin3:
4.06
        Variation: June 17th, 2011
7 months agowri2 WRI1 transcription factor2:
4.08
 GRMZM2G174834
 Rogowsky, P. 2011. Plant Physiol. 2011:doi: 10.1104/pp.111.173641     Reference: June 14th, 2011
Variation: April 11th, 2011
Gene Model: April 7th, 2011
7 months agonec7 necrotic7: lighter green seedling becoming necrotic in crossbands
5.04 - 5.09
    Neuffer, MG and England, DJ. 1995. MNL 69:43-46     Reference: September 1st, 2003
Variation: June 14th, 2011
7 months agoet2 etched2: endosperm etched; seedlings off-white albino, with occasional greening of leaf tips
2.02 - 2.03
    Stinard, PS and Schnable, PS. 1994. MNL 68:107-108     Reference: September 1st, 2003
Variation: June 14th, 2011
7 months agopyk1 pyruvate kinase1:
1.05
    Rogowsky, P. 2011. Plant Physiol. 2011:doi: 10.1104/pp.111.173641     Reference: June 14th, 2011
Gene Product: April 8th, 2011
7 months agowri1 WRI1 transcription factor1:
 
 GRMZM2G124524
 Rogowsky, P. 2011. Plant Physiol. 2011:doi: 10.1104/pp.111.173641     Reference: June 14th, 2011
Variation: April 11th, 2011
Gene Model: April 8th, 2011
7 months agobm5 brown midrib5:
 
    Chen, Y; et al. 2011. Maize Genetics Conference Abstracts. 53:P166     Reference: March 25th, 2011
Variation: June 14th, 2011
7 months agogl15 glossy15: glossy leaf surface expressed after 3rd leaf (aka gl4)
9.03
    Evans, MMS; Poethig, RS. 1991. MNL 65:91-92     Reference: June 13th, 2011
Variation: September 1st, 2003
7 months agoa2 anthocyaninless2: like a1, but red pericarp with P1-rr
5.03
    Sharma, M, et al. 2011. Genetics. 188:69-79     Reference: June 10th, 2011
Gene Product: September 1st, 2003
Variation: May 19th, 2006
7 months agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017
9.02
    Sharma, M, et al. 2011. Genetics. 188:69-79     Reference: June 10th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
7 months agobz2 bronze2: like bz1; anthers not fluorescent; an1-6923 mutation includes deletion for Bz2; encodes a glutathione S-transferase conjugating anthocyanins into the vacuole
1.08
    Sharma, M, et al. 2011. Genetics. 188:69-79     Reference: June 10th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
7 months agoc2 colorless2: colorless aleurone, reduced plant and cob color; C2-Idf dominant inhibitor; duplicate factor with whp1 for pollen color and for anthocyanins
4.08
    Sharma, M, et al. 2011. Genetics. 188:69-79     Reference: June 10th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
7 months agochi1 chalcone flavanone isomerase1: genomic sequence, gene-specific probe, transcript defined by S1-nuclease protection analysis
1.11
    Sharma, M, et al. 2011. Genetics. 188:69-79     Reference: June 10th, 2011
Gene Product: October 13th, 2010
Variation: September 1st, 2003
7 months agocms-S cytoplasmic male sterility: female-transmitted male sterility, S type; restored by Rf3
 
    Josephson, LM. 1955. Empire J Exp Agric 23(89):1-10     Reference: June 9th, 2011
Variation: June 8th, 2011
7 months agocms-T cytoplasmic male sterility: female-transmitted male sterility, Texas type; restored by Rf1 Rf2
 
    Josephson, LM. 1955. Empire J Exp Agric 23(89):1-10     Reference: June 9th, 2011
Variation: September 1st, 2003
8 months agomas1 malate synthase1: cDNA isolated by antibody screen
2.04
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agoccp2 cysteine protease2: mRNA differentially enhanced in late- vs. early-senescing lines; similarity to rice oryzain gamma (cysteine protease) and castor bean vacuolar processing enzyme
7.02
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agopld1 phospholipase D1: cDNA clone, amino acid sequence 90% similar to rice PLD
3.03
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: June 6th, 2011
Variation: June 21st, 2006
8 months agochn2 chitinase2: acidic chitinase I, based on cDNA sequence similarity; Southern blots suggest multiple copies
6.01
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agoexg1 exoglucanase1: genomic and cDNA clones; role in cell wall expansion
1.10
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Gene Product: September 1st, 2003
Variation: June 6th, 2011
8 months agotub6 beta tubulin6:
8.08
    Yandeau-Nelson, M et al. 2011. Plant Physiol 156:479-490     Reference: June 6th, 2011
Variation: April 2nd, 2007
8 months agoago104 argonaute104:
6.07
 GRMZM2G141818
 Singh, M, et al. 2011. Plant Cell. 23:443-458     Reference: June 3rd, 2011
Gene Product: September 2nd, 2010
Variation: September 11th, 2007
Gene Model: March 31st, 2011
8 months agozyp1 synaptonemal complex protein ZYP1:
 
    Golubovskaya, I et al. 2011. J Exp Bot 62:1533-1544     Reference: May 26th, 2011
Gene Product: March 2nd, 2011
Variation: March 2nd, 2011
8 months agorgd1 ragged seedling1: (aka lbl1) seedling leaves narrow, thread-like, have difficulty in emerging; low temperature enhances expression
6.01 - 6.01
    Douglas, R, et al. 2010. Plant Cell. 22:1441-1451     Reference: September 2nd, 2010
Gene Product: May 20th, 2008
Variation: May 25th, 2011
8 months agop1 pericarp color1: dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob) and in tassel glumes and husks; tissue-specific allele variations; SSR phi095
1.03
    Rhee, Y et al. 2010. Genetics 186:843-855     Reference: May 20th, 2011
Gene Product: October 13th, 2010
Variation: April 18th, 2005
8 months agoufo1 unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded
10.03
    Rhee, Y et al. 2010. Genetics 186:843-855     Reference: May 20th, 2011
Variation: September 1st, 2003
8 months agoms26 male sterile26: tapetal cells abnormal, die early; microspores vacuolate early and abort after the tetrad stage
1.02 - 1.02
    Albertsen, MC et al. 2006. Patent 7,098,388 B2     Reference: May 18th, 2011
Variation: May 19th, 2006
8 months agoadh1 alcohol dehydrogenase1: electrophoretic mobility; null alleles are known; dimeric; intra/interlocus hybrid bands occur); SSR umc1726
1.10
    Birchler, JA. 1981. Genetics 97:625-637     Reference: May 14th, 2011
Gene Product: July 8th, 2009
Variation: September 1st, 2003
8 months agoadh2 alcohol dehydrogenase2: electrophoretic mobility, null alleles are known; dimeric, intra/interlocus hybrid bands occur; SSRs nc004, phi021
4.03
    Guo, M; Birchler, JA. 1994. Science 266:1999-2002     Reference: May 14th, 2011
Gene Product: July 8th, 2009
Variation: September 1st, 2003
8 months agoc1 colored aleurone1: C1 colored; C1-I dominant colorless; c1 colorless, includes c1-p (pigment inducible by light at germination), c1-n (not inducible)
9.01
    Auger, DL, et al. 2005. Genetics. 169:389-397     Reference: May 14th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agoglb1 globulin1: (was prot1) electrophoretic mobility, null allele is known; embryo protein; SSRs phi011, 055, 094
1.09
    Guo, M; Birchler, JA. 1994. Science 266:1999-2002     Reference: May 14th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agor1 colored1: regulates anthocyanin pathway; dominant R1 (S element) confers function in aleurone; dominants represented by R1-r or r1-r (P element) confer function in anthers, leaf tip, brace roots, etc.
10.06
    Auger, DL, et al. 2005. Genetics. 169:389-397     Reference: May 14th, 2011
Gene Product: October 13th, 2010
Variation: March 15th, 2010
8 months agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
    Guo, M; Birchler, JA. 1994. Science 266:1999-2002     Reference: May 14th, 2011
Gene Product: October 25th, 2006
Variation: September 1st, 2003
8 months agowc1 white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns
9.07
    Tan, BC et al. 2006. Maize Genetics Conference Abstracts 48:P252     Reference: May 14th, 2011
Gene Product: May 13th, 2011
Variation: April 23rd, 2008
8 months agosus1 sucrose synthase1: (was sus2, css1) sucrose synthase-1 (SUS1) of embryo and other tissues, compare sh1; SSRs phi016, 032, 042
9.04
    Guo, M; Birchler, JA. 1994. Science 266:1999-2002     Reference: May 14th, 2011
Gene Product: October 25th, 2006
Variation: September 1st, 2003
8 months agomrpa4 multidrug resistance-associated protein 4:
1.01
    Pilu, R et al. 2003. Theor Appl Genet 107:980-987     Reference: May 11th, 2011
Variation: May 14th, 2011
8 months agomrpa7 multidrug resistance associated protein7:
 
    Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Variation: May 14th, 2011
8 months agomyb39 myb transcription factor39:
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: February 16th, 2011
Variation: February 16th, 2011
8 months agolpa1 low phytic acid1: decreased phytic acid in grain with corresponding increases in inorganic phosphate
1.02
    Pilu, R et al. 2003. Theor Appl Genet 107:980-987     Reference: May 11th, 2011
Gene Product: September 1st, 2003
Variation: April 30th, 2011
Recommended by Ed Coe:
January 8th, 2008
9 months agodcl101 dicer-like 101:
1.01
        Variation: May 6th, 2011
9 months agolpa3 low phytic acid3:
 
    Shi, JR et al. 2005. Plant J 42:708-719     Reference: May 1st, 2011
Variation: May 1st, 2011
9 months agovt2 vanishing tassel2: inflorescence development; TRP-depenedent auxin synthesis
 
    Phillips, K, et al. 2011. Plant Cell. 0:doi: 10.1105/tpc.110.075267     Reference: March 31st, 2011
Gene Product: April 30th, 2011
Variation: April 1st, 2011
9 months agolpa2 low phytic acid2: low phytic acid
1.05
    Shi, J et al. 2003. The maize low-phytic acid mutant 1pa2 is caused by mutation in an inositol phosphate kinase gene. Plant Physiol 131:507-515     Reference: April 28th, 2011
Variation: June 29th, 2005
Recommended by Ed Coe:
January 8th, 2008
9 months agoes4 embryo sac4: one of 4-5 copy gene family; pre-zygotic, embryo sac specific; required for pollen tube growth arrest and burst
 
 GRMZM2G128301
 Amien, S, et al. 2010. PLoS Biol. 8:e1000388. doi:10.1371/journal.pbio.1000388     Reference: April 22nd, 2011
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
9 months agoes1 embryo sac1: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
 GRMZM2G012012
 Amien, S, et al. 2010. PLoS Biol. 8:e1000388. doi:10.1371/journal.pbio.1000388     Reference: April 22nd, 2011
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
9 months agoptf1 Pi starvation-induced transcription factor1: single copy, may be involved in regulating carbohydrate metabolism
9.01 - 9.02
 GRMZM2G024530
 Li, Z; Gao, Q; Liu, Y; He, C; Zhang, X; Zhang, JR. 2011. Planta Feb:epub ahead of print   LOC_Os02g35660 (MSU/TIGR)
LOC_Os02g35660 (Gramene) 		Reference: April 21st, 2011
Gene Product: April 19th, 2011
Variation: April 23rd, 2011
Gene Model: April 19th, 2011
Recommended by Maria Katherine Mejia-Guerra :
April 18th, 2011
9 months agoes2 embryo sac2: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
 GRMZM2G128301
 Amien, S, et al. 2010. PLoS Biol. 8:e1000388. doi:10.1371/journal.pbio.1000388     Reference: April 22nd, 2011
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
9 months agoes3 embryo sac3: one of 4-5 copy gene family; pre-zygotic embyro sac specific; required for pollen tube growth arrest and burst
 
 GRMZM2G128301
 Amien, S, et al. 2010. PLoS Biol. 8:e1000388. doi:10.1371/journal.pbio.1000388     Reference: April 22nd, 2011
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
9 months agokch4 potassium channel4:
3.02
 GRMZM2G093313
 Buchsenschutz , K, et al. 2005. Planta. 222:968-976     Reference: July 13th, 2006
Gene Product: February 20th, 2008
Variation: February 19th, 2008
Gene Model: April 22nd, 2011
9 months agokch3 potassium channel3: single copy (Southern blot), function confirmed by expression in Xenopus oocytes (Philippar 2003; Su 2005)
2.06
 GRMZM2G081666
 Amien, S, et al. 2010. PLoS Biol. 8:e1000388. doi:10.1371/journal.pbio.1000388     Reference: April 22nd, 2011
Gene Product: February 20th, 2008
Variation: February 20th, 2008
Gene Model: April 22nd, 2011
9 months agomph1 modifier of phototropism1: coleoptiles have minimal phototropism when recessive for Strawberry popcorn and Argentine popcorn alleles
 
    Baskin, TI et al. 1999. Maydica 44:119-125     Reference: September 1st, 2003
Variation: April 21st, 2011
9 months agovp*-5111 viviparous*-5111: A white endosperm, albino seedling viviparous. Like vp5 or vp9
 
        Variation: April 21st, 2011
9 months agosun1 SUN domain protein1: canonical C-terminal SUN-domain (CCSD) type nuclear envelope protein
 
 GRMZM2G109818
 Murphy, S et al. 2010. BMC Plant Biology 20:269     Reference: April 20th, 2011
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agosun2 SUN domain protein2:
 
 GRMZM2G440614
     Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agosun3 SUN domain protein3: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein
 
    Murphy, S et al. 2010. BMC Plant Biology 20:269     Reference: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agosun4 SUN domain protein4:
 
    Murphy, S et al. 2010. BMC Plant Biology 20:269     Reference: April 20th, 2011
Variation: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agosun5 SUN domain protein5: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein; may be pollen specific
 
 AC194341.4_FG003
 Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agodmt103b DNA methyl transferase:
1.01
    Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: September 1st, 2006
Variation: April 14th, 2011
9 months agolty1 light yellow endosperm1: reduced color; heterozygote advantage; induced by mutagens in Oh43
 
    Dollinger, EJ. 1985. Crop Sci 25:819-821     Reference: September 1st, 2003
Variation: April 11th, 2011
9 months agostt1 stunter1: developmentally delayed miniature kernels
 
    Phillips, AR; Evans, M. 2011. Genetics 187:1085-1097     Reference: April 11th, 2011
Variation: April 11th, 2011
10 months agorpl5a 60S ribosomal protein L5-1 homolog a: endosperm cDNA 5C05D11 (uaz189), similar to ribosomal protein
3.05
    Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: April 9th, 2011
10 months agorpl5b 60S ribosomal protein L5-1 homolog b:
 
        Variation: April 9th, 2011
10 months agopyk2 pyruvate kinase2:
10.01
        Gene Product: April 8th, 2011
Variation: April 6th, 2007
10 months agolec1 LEC1 transcription factor1:
5.06
 GRMZM2G490094
 Shen, B; Allen, WB; Zheng, P; Li, C; Glassman, K; Ranch, J; Nuber, D; Tarczynski, MC. 2010. Plant Physiol. 153:893-894     Reference: April 8th, 2011
Gene Product: April 8th, 2011
Gene Model: April 8th, 2011
10 months agomyo2 myosin2:
 
    Liu, L et al. 2001. Cell Motil Cytoskeleton 48:130-148     Reference: April 8th, 2011
Gene Product: September 1st, 2003
Variation: February 21st, 2008
10 months agoidd7 indeterminate1 domain7:
7.03
    Colasanti, JJ et al. 2006. BMC Genomics 7:158     Reference: April 2nd, 2010
Variation: April 6th, 2011
10 months agogo1 glycolate oxidase1: seedling lethal necrotic unless supplied high CO2; photorespiration.
 
    Zelitch, I; Schultes, N; Peterson, RB; Brown, P; Brutnell, TP. 2009. Plant Physiol. 149:195-204     Reference: April 4th, 2011
Gene Product: June 26th, 2009
Variation: April 4th, 2011
10 months agozmm7 Zea mays MADS7: identified by Northern analysis; expression female-specific, late onset
7.03
    Lid, SE; Meeley, R; Min, Z; Nichols, S; Olsen, OA. 2004. Plant Sci. 167:575-582     Reference: October 4th, 2004
Gene Product: April 1st, 2011
Variation: August 8th, 2008
10 months agozmm6 Zea mays MADS6: single copy; identified by cDNA hybridization in situ; early expression in male and female inflorescences, differentially in one member of a spikelet-primordium pair
1.06
    Lid, SE; Meeley, R; Min, Z; Nichols, S; Olsen, OA. 2004. Plant Sci. 167:575-582     Reference: October 4th, 2004
Gene Product: April 1st, 2011
Variation: August 8th, 2008
10 months agoagpsl1 ADP glucose pyrophosphorylase small subunit leaf1: leaf-specific
1.07
    Slewinski, TL et al. 2008. J Hered 99:661-666     Reference: April 1st, 2011
Gene Product: September 1st, 2003
Variation: November 22nd, 2005
10 months agozmm8 Zea mays MADS8:
9.06
    Lid, SE; Meeley, R; Min, Z; Nichols, S; Olsen, OA. 2004. Plant Sci. 167:575-582     Reference: October 4th, 2004
Gene Product: April 1st, 2011
Variation: April 4th, 2007
10 months agozmm16 Zea mays MADS16: single copy; orthologous to rice GLO-like gene, OSMADS2; strongly expressed in developing male and female inflorescences but wealky expressed indeveloping kernels.
3.06
    Muenster, T et al. 2001. Gene 262:1-13     Reference: February 4th, 2011
Gene Product: April 1st, 2011
10 months agobde1 bearded-ear1: floral development MADS box transcription factor; recessive mutant has silky-polytypic-like ear
5.06
    Thompson, BE, et al. 2009. Plant Cell. 21:2578-90     Reference: January 5th, 2010
Gene Product: April 1st, 2011
Variation: October 7th, 2009
10 months agozag5 zea agamous5: MADS box, gene specific cDNA probe, expressed in carpels not stamens; SNP pzd00018
4.06 - 4.06
    Reinheimer, R; Kellogg, EA. 2009. Plant Cell. 0:epub ahead of print     Reference: October 15th, 2009
Gene Product: April 1st, 2011
Variation: October 7th, 2009
10 months agozag2 Zea AGAMOUS homolog2: amino acid sequence, deduced from cDNA sequence, has 49% identity to Arabidopsis, floral homeotic gene product; expression restricted to female inflorescence; near ts4
3.05 - 3.05
    Heuer, S et al. 2000. Sex Plant Reprod 13:21-27     Reference: April 3rd, 2008
Gene Product: April 1st, 2011
Variation: September 1st, 2003
10 months agospi1 sparse inflorescence1:
3.08
    Phillips, K, et al. 2011. Plant Cell. 0:doi: 10.1105/tpc.110.075267     Reference: March 31st, 2011
Gene Product: April 1st, 2009
Variation: April 2nd, 2009
Recommended by Lisa Harper:
October 7th, 2008
10 months agobif2 barren inflorescence2: recessive few-branched tassel, normally no pollen shed; variable expression on ear with 0-2 spikelets produced at each floral node
1.05
    Phillips, K, et al. 2011. Plant Cell. 0:doi: 10.1105/tpc.110.075267     Reference: March 31st, 2011
Variation: June 29th, 2005
10 months agonrp1 no-apical-meristem-related protein1:
 
    Guo, M; Rupe, M; Danilevskaya, O; Yang, X; Hut, ZH. 2003. Plant J. 36:30-44     Reference: November 12th, 2010
Variation: March 31st, 2011
10 months agocah1 carbonic anhydrase1: leaf cDNA csu125 sequence similar to pea carbonic anhydrase
 
    Rixmann, C et al. 1992. in Heller, SR et al. 1992. Abstracts, Plant Genome I, San Diego, CA     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: March 30th, 2011
10 months agobm6 brown midrib6: not allelic to bm1 - bm5, novel bm locus (Paul Scott and Thomas Lubberstedt, pers comm)
 
    Chen, Y; et al. 2011. Maize Genetics Conference Abstracts. 53:P166     Reference: March 25th, 2011
Variation: May 4th, 2010
10 months agoapo1 accumulation of photosystem one1: plastid splicing in Arabidopsis ortholog, apo1
 
    Watkins, K; Rojas, M; Frisco, G; van Wijk, KJ; Meurer, J; Barkan, A. 2011. Plant Cell pp.Mar epub ahead of print     Reference: March 24th, 2011
Variation: March 24th, 2011
10 months agovpp4 vacuolar proton pump4: coleoptile tip cDNA sequences similar to other plant homologs
10.02
    Viereck, R et al. 1996. FEBS Lett 384:285-288     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: March 18th, 2011
10 months agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
    Hayes, KR et al. 2010. PLoS One 5:e12887     Reference: November 12th, 2010
Variation: March 18th, 2011
10 months agocca1 circadian clock associated1: myb transcription factor - clock gene
 
    Hayes, KR et al. 2010. PLoS One 5:e12887     Reference: November 12th, 2010
Variation: March 18th, 2011
10 months agoog1 old gold stripe1: dominant Og1 plants have variable bright yellow stripes on leaf blade
10.03 - 10.03
    Stinard, PS. 2009. MNL 83:52     Reference: March 17th, 2011
Variation: September 1st, 2003
10 months agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
    Stinard, PS. 2009. MNL 83:52     Reference: March 17th, 2011
Gene Product: June 8th, 2007
Variation: September 1st, 2003
10 months agoenr1 enhancement of r1:
 
    Stinard, PS. 2009. MNL 83:50-51     Reference: March 17th, 2011
Variation: February 23rd, 2009
10 months agoenr2 enhancement of r2:
 
    Stinard, PS. 2009. MNL 83:50-51     Reference: March 17th, 2011
Variation: February 23rd, 2009
10 months agogpa1 glyceraldehyde-3-phosphate dehydrogenase1: chloroplastic, A subunit; cDNA subclone GAPA1S (aka umc188) probes one site on 8 (correction from previous maps); two pseudogenes have been identified, and leaf cDNA csu140 hybridizes to 2 other bands
8.03
    Kersanach, R et al. 1994. Nature 367:387-389     Reference: March 15th, 2011
Gene Product: September 1st, 2003
Variation: June 8th, 2010
10 months agogpc1 glyceraldehyde-3-phosphate dehydrogenase1: cytosolic, C subunit, type 3 gene; coding region has sequence homology to gpc2, unique 3' untranslated region, constitutive expression; SSRs phi026, 079
4.05
    Kersanach, R et al. 1994. Nature 367:387-389     Reference: March 15th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
10 months agolg1 liguleless1: ligule and auricle missing; leaves upright, enveloping
2.01
    Tian, F et al. 2011. Nature Genetics 43:159-162     Reference: March 15th, 2011
Gene Product: September 1st, 2003
Variation: May 19th, 2006
10 months agolg2 liguleless2: like lg1, less extreme
3.06
    Tian, F et al. 2011. Nature Genetics 43:159-162     Reference: March 15th, 2011
Gene Product: September 1st, 2003
Variation: May 19th, 2006
10 months agogpc4 glyceraldehyde-3-phosphate dehydrogenase4: C subunit, electrophoretic mobility, coding sequence homology to gpc3, unique 3' untranslated region
5.05
    Kersanach, R et al. 1994. Nature 367:387-389     Reference: March 15th, 2011
Gene Product: September 1st, 2003
Variation: August 9th, 2006
11 months agobm7 brown midrib7:
 
        Variation: March 7th, 2011
11 months agopropep1 precursor elicitor peptide1:
 
    Huffaker, A; Dafoe, NJ; Schmelz, EA. 2011. Plant Physiol. 155:1325-1338     Reference: March 4th, 2011
Variation: March 4th, 2011
11 months agosdh2-rps14 succinate dehydrogenase-rps14: chimeric protein, succinate dehydrogenase iron-sulfur protein and ribosomal protein S14, mitochondrial
4.05
    Figueroa, P et al. 2000. Biochem Biophys Res Commun 271:380-385     Reference: September 1st, 2003
Variation: February 18th, 2011
11 months agomyb40 myb transcription factor40:
3.04
    Dias, A et al. 2003. Recently duplicated maize R2R3 Myb genes provide evidence for distinct mechanisms of evolutionary divergence after duplication. Plant Physiol 131:610-620     Reference: February 17th, 2011
Variation: September 25th, 2007
11 months agomyb95 myb transcription factor95:
 
    Dias, A et al. 2003. Recently duplicated maize R2R3 Myb genes provide evidence for distinct mechanisms of evolutionary divergence after duplication. Plant Physiol 131:610-620     Reference: February 17th, 2011
Variation: February 17th, 2011
11 months agomyb9 MYB transcription factor9:
 
    Fornale, Silvia et al. 2006. Plant Mol Biol 62:809-23     Reference: February 8th, 2011
Gene Product: February 16th, 2011
Variation: February 16th, 2011
11 months agomyb8 myb transcription factor8:
 
    Fornale, Silvia et al. 2006. Plant Mol Biol 62:809-23     Reference: February 8th, 2011
Gene Product: February 16th, 2011
Variation: February 16th, 2011
11 months agothi2 thiamine biosynthesis2: cDNA closely similar to sequence of thi1, which complements yeast thi4thiamine auxotroph; progressive elimination of leaf blade, successive younger leaves most affected; generally tasselless
3.09
    Woodward, J, et al. 2010. Plant Cell. 22:3305-3317     Reference: January 3rd, 2011
Gene Product: February 14th, 2011
Variation: February 11th, 2011
11 months agothi1 thiamine biosynthesis1: low copy, thiazole biosynthesis, cDNA complements yeast thi4
8.05
    Belanger, FC et al. 1995. Plant Mol Biol 29:809-821     Reference: September 1st, 2003
Gene Product: February 14th, 2011
Variation: September 1st, 2003
11 months agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061
9.03
    Anderson, L, et al. 2004. Genetics. 166:1923-1933     Reference: February 12th, 2011
Gene Product: June 4th, 2008
Variation: October 16th, 2007
11 months agopck2 phosphoenolpyruvate carboxykinase homolog2: leaf cDNA csu145, low copy, similar to yeast phosphoenolpyruvate carboxykinase
9.06
    Anderson, L, et al. 2004. Genetics. 166:1923-1933     Reference: February 12th, 2011
Variation: March 31st, 2005
11 months agomet3 DNA methyl transferase3:
9.07
    Garcia-Aguilar, M; Michaud, C; LeBlanc, O; Grimanelli, D. 2010. Plant Cell. 22:3249-3267     Reference: February 9th, 2011
Gene Product: September 1st, 2006
Variation: February 10th, 2010
12 months agozmm15 Zea mays MADS-box 15:
 
    Muenster, T et al. 2002. Maydica 47:287-301     Reference: February 4th, 2011
Variation: February 1st, 2011
12 months agotu1 tunicate1: dominant Tu1 ears develop long glumes enclosing individual kernels; tassels develop large, coarse glumes and sex reversal; both inflorescences become grossly vegetative and sterile in homozygotes
4.08 - 4.08
    Muenster, T et al. 2002. Maydica 47:287-301     Reference: February 4th, 2011
Variation: September 1st, 2003
12 months agozmm18 Zea mays MADS18: single copy gene that co-segregates and shares 97% sequence identity with zmm29; probably an ortholog of rice GLOBOSA-like gene, OSMADS4; expressed in male and female inflorescences and developing kernels.
8.03
    Muenster, T et al. 2001. Gene 262:1-13     Reference: February 4th, 2011
Gene Product: September 1st, 2003
12 months agozmm29 Zea mays MADS29: single copy gene that co-segregates and shares 97% nt sequence identity with zmm18; probably an ortholog of rice GLOBOSA-like gene, OSMADS4; strongly expressed in male and female inflorescences and developing kernels.
8.03
    Muenster, T et al. 2001. Gene 262:1-13     Reference: February 4th, 2011
Gene Product: September 1st, 2003
12 months agozmm31 Zea mays MADS31:
5.01
    Muenster, T et al. 2002. Maize MADS-box genes galore. Maydica 47:287-301     Reference: February 4th, 2011
Variation: August 7th, 2008
12 months agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
    Muenster, T et al. 2002. Maize MADS-box genes galore. Maydica 47:287-301     Reference: February 4th, 2011
Gene Product: September 1st, 2003
Variation: April 15th, 2008
12 months agozmm24 Zea mays MADS24:
1.10
    Muenster, T et al. 2002. Maize MADS-box genes galore. Maydica 47:287-301     Reference: February 4th, 2011
Variation: August 7th, 2008
12 months agopht7 phosphate transporter protein7:
 
    Nagy, R et al. 2006. Plant Biol (Stuttg) 8:186-197     Reference: February 1st, 2011
Variation: February 4th, 2011
12 months agozmm27 Zea mays MADS27: AGL2 MADS box family
2.07
    Muenster, T et al. 2002. Maize MADS-box genes galore. Maydica 47:287-301     Reference: February 4th, 2011
Variation: June 16th, 2005
12 months agoxth1 xyloglucan endo-transglycosylase/hydrolase1:
10.03
    Genovesi, V et al. 2008. J Exp Bot 59:875-889     Reference: February 4th, 2011
Variation: February 4th, 2011

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