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CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

Below is a list of newly reported or newly characterized genes as well as some noteworthy ones (oldies but goodies) with which you may not yet be familiar. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!


GeneFull NameChromosome
or Bin
Recent ReferenceCooperatorDate
ppr5chloroplast pentatricopeptide repeat protein ?Williams-Carrier R. et al. RNA. 2008 Sep;14(9):1930-42.
Beick S. et al. Mol Cell Biol. 2008 Sep;28(17): 5337-47.
Alice BarkanNovember 17, 2008
wtf1functions in chloroplast RNA splicing ?Kroeger TS, Watkins KP, Friso G, van Wijk K, and Barkan A. 2009. Proc. Natl. Acad. Sci., 106: 4537-42. Alice BarkanNovember 17, 2008
ppr10pentatricopeptide repeat protein ?Pfalz J, Bayraktar OA, Prikryl J, and Barkan A. 2009. EMBO J. published online May 7, 2009. Alice BarkanNovember 17, 2008
spi1sparse inflorescence1 ?Gallavotti, A, et al. 2008. Proc Natl Acad Sci, USA. 0:Epub ahead of printLisa HarperOctober 7, 2008
mwp1milkweed pod1 7.02Candela, H et al. 2008. Plant Cell. Epub ahead of printMary SchaefferSeptember 8, 2008
sid1sister of indeterminate spikelet1 ?Chuck, G et al. 2008. Development. Epub ahead of printLisa HarperSeptember 2, 2008
rif1R-interacting factor1 ?Hernandez, M. et al. 2008. Proc Nat Acad Sci U S A 104:17222-17227Edward GrowMarch 28, 2008
acpt1acyl carrier protein11.07Souciet, G and Weil, JH. 1992. Plant Sci 81:215-225Ed CoeJanuary 8, 2008
amy5alpha amylase57.03Wang, S et al. 1997. Plant Physiol 113:403-409Ed CoeJanuary 8, 2008
an2kaurene synthase21.04Harris, LJ, et al. 2005. Plant Mol Biol. 59:881-884Ed CoeJanuary 8, 2008
apx2ascorbate peroxidase22.08Van Breusegem, F. et al. 1995. Plant Physiol 107:649-650Ed CoeJanuary 8, 2008
bzip1bZIP transcription factor13.08Nieva, C, et al. 2005. Plant Mol Biol. 58:899-914Ed CoeJanuary 8, 2008
cad1cinnamyl alcohol dehydrogenase12.02Morrison, TA; Buxton, DR. 1993. Crop Sci 33:1264-1268Ed CoeJanuary 8, 2008
cka1CK2 protein kinase alpha11.10Riera, M et al. 2001. Molecular and Cellular Biochemistry 227:119-127Ed CoeJanuary 8, 2008
cka2CK2 protein kinase alpha21.10Riera, M et al. 2001. Molecular and Cellular Biochemistry 227:119-127Ed CoeJanuary 8, 2008
cka3CK2 protein kinase alpha37.00Riera, M et al. 2001. Plant J 25:365-374Ed CoeJanuary 8, 2008
cka4CK2 protein kinase alpha47.00Riera, M et al. 2001. Plant J 25:365-374Ed CoeJanuary 8, 2008
cko2cytokinin oxidase23.05Massonneau, A; Laloue, M. 2004. J Exp Bot. 55:2549-2557Ed CoeJanuary 8, 2008
eif5eucaryotic translation initiation factor54.10Lopez Ribera, I and Puigdomenech, P. 1999. Gene 240:355-359Ed CoeJanuary 8, 2008
eif7eucaryotic initiation factor75.03Manjunath, S et al. 1999. Plant J 19:21-30Ed CoeJanuary 8, 2008
eng1endo-1,3-1,4-beta-D-glucanase14.05Thomas, B et al. 2000. Int J Biol Macromol 27: 145-149Ed CoeJanuary 8, 2008
ers14enhancer of rough sheath145.02Gallie, DR; Young, T. 2004. Mol Genet Genomics. 271:267-281Ed CoeJanuary 8, 2008
fad7fatty acid desaturase79.06Berberich, T et al. 1998. Plant Mol Biol 36:297-306Ed CoeJanuary 8, 2008
ndk1nucleotide diphosphate kinase17.03Shen, B et al. 1994. Plant Mol Biol 26:1085-1101Ed CoeJanuary 8, 2008
pcna2proliferating cell nuclear antigen24.07Lopez, I et al. 1997. Biochim Biophys Acta 1353:1-6Ed CoeJanuary 8, 2008
serk2somatic embryogenesis receptor-like kinase25.05Baudino, S et al. 2001. Planta 213:1-10Ed CoeJanuary 8, 2008
cyp10cytochrome P450 103.09noneEd CoeJanuary 8, 2008
der2derlin210.03Kirst, M; et al. 2005. Plant Physiol. 138:218-231Ed CoeJanuary 8, 2008
gsh1gamma-glutamylcysteine synthetase16.01Gomez, LD, et al. 2004. Plant Physiol. 134:1662-1671Ed CoeJanuary 8, 2008
lpa1low phytic acid11.02Shukla, S; Vantoai, TT; Pratt, RC. 2004. J Agric Food Chem. 52:4565-4570Ed CoeJanuary 8, 2008
lpa2low phytic acid21.04-1.05Shi, J et al. 2003. Plant Physiol 131:507-515Ed CoeJanuary 8, 2008
lrs1liguleless related sequence18.07Langham, RJ, et al. 2004. Genetics. 166:935-945Ed CoeJanuary 8, 2008
mlo9barley mlo defense gene homolog92.01Devoto, A et al. 2003. J Mol Evol 56: 77-88Ed CoeJanuary 8, 2008
mop1mediator of paramutation12.04Parkinson, S; Gross, S; Hollick, J. 2007. Dev Biol. 308:462-473Ed CoeJanuary 8, 2008
mtl2metallothionein21.05White, CN; Rivin, CJ. 1995. Plant Physiol 108:831-832Ed CoeJanuary 8, 2008
nrx1nucleoredoxin11.04Laughner, BH et al. 1998. Plant Physiol 118:987-996Ed CoeJanuary 8, 2008
pls1phospholipid synthesis14.01-4.02Brown, AP, et al. 1994. Plant Mol Biol 26:211-223Ed CoeJanuary 8, 2008
tacs1terminal acidic SANT 12.08Marian, CO; Bass, HW. 2005. Biochim Biophys Acta. 14:81-86Ed CoeJanuary 8, 2008
ugu1UTP-glucose-P-uridyltransferase homolog5.03noneEd CoeJanuary 8, 2008
ypt2ypt homolog25.06Fabry, S et al. 1992. Gene 118:153-162Ed CoeJanuary 8, 2008
cg1corngrass13.02Chuck, G. et al. 2007. Nature Genetics. 39:544-9George ChuckSept. 25, 2007
ts4tasselseed43.05Chuck, G. et al. 2007. Maize Genetics Conference Abstracts. 49:T32George ChuckSept. 25, 2007
ts6tasselseed61.11Hake, S. et al. 2007. Maize Genetics Conference Abstracts. 49:Plen2George ChuckSept. 25, 2007
der1derlin18.03Kirst, M. et al. 2005. Plant Physiol. 138:218-231Ed CoeMay 1, 2007
drh1DEAD box RNA helicase13.05Gendra, E. et al. 2004. Plant J. 38:875-886Ed CoeMay 1, 2007
lrk1Ser/Thr receptor-like kinase18.00-8.01Royo, J. et al. 2006. Planta 223: 1303-1314Ed CoeMay 1, 2007
opr512-oxo-phytodienoic acid reductase52.04Zhang, J. et al. 2005. Plant Mol Biol. 59:323-343Ed CoeMay 1, 2007
stk2serine-threonine kinase22.04Alleman, M. et al. 2006. Nature. 442:295-298Ed CoeMay 1, 2007
czog2cis-zeatin O-glucosyltransferase2?Veach, C. et al. 2003. Plant Physiol 131: 1374-1380Marty SachsMarch 7, 2007
gl8bbeta-ketoacyl reductase4.05Dietrich, C, et al. 2005. Plant J. 42:844-861Marty SachsMarch 7, 2007
mlo1barley mlo defense gene homolog11.01Devoto, A et al. 2003. J Mol Evol 56: 77-88Marty SachsMarch 7, 2007
mlo2barley mlo defense gene homolog21.05Devoto, A et al. 2003. J Mol Evol 56: 77-88Marty SachsMarch 7, 2007
mlo3barley mlo defense gene homolog32.04Devoto, A et al. 2003. J Mol Evol 56: 77-88Marty SachsMarch 7, 2007
mlo4barley mlo defense gene homolog44.09Devoto, A et al. 2003. J Mol Evol 56: 77-88Marty SachsMarch 7, 2007
mlo5barley mlo defense gene homolog53.06Devoto, A et al. 2003. J Mol Evol 56: 77-88Marty SachsMarch 7, 2007
mlo6barley mlo defense gene homolog65.04-5.05Devoto, A et al. 2003. J Mol Evol 56: 77-88Marty SachsMarch 7, 2007
mlo7barley mlo defense gene homolog79.04Devoto, A et al. 2003. J Mol Evol 56: 77-88Marty SachsMarch 7, 2007
mlo8barley mlo defense gene homolog86.05Devoto, A et al. 2003. J Mol Evol 56: 77-88Marty SachsMarch 7, 2007
orc2origin recognition complex2?Witmer, X et al. 2003. Nucl Acid Res 31:619-628Marty SachsMarch 7, 2007
orc3origin recognition complex3?Witmer, X et al. 2003. Nucl Acid Res 31:619-628Marty SachsMarch 7, 2007
orc4origin recognition complex4?Witmer, X et al. 2003. Nucl Acid Res 31:619-628Marty SachsMarch 7, 2007
orc5origin recognition complex5?Witmer, X et al. 2003. Nucl Acid Res 31:619-628Marty SachsMarch 7, 2007
rab2aRas-related protein Rab-2-A2.04Laughner, BH and Ferl, RJ. 1997. MNL 71:36Marty SachsMarch 7, 2007
sig1Asigma factor 1A?Beardslee, T et al. 2002. Plant J 31:199-209Marty SachsMarch 7, 2007
sig1Bsigma factor 1B?Beardslee, T et al. 2002. Plant J 31:199-209Marty SachsMarch 7, 2007
vp15viviparous15?Suzuki, M et al. 2006. Plant J 45: 264-274Marty SachsMarch 7, 2007
yab9yabby9?Juarez, MT et al. 2004. Development. 131:4533-4544Marty SachsMarch 7, 2007
yab10yabby101.07Juarez, MT et al. 2004. Development. 131:4533-4544Marty SachsMarch 7, 2007
yab14yabby14?Juarez, MT et al. 2004. Development. 131:4533-4544Marty SachsMarch 7, 2007
tak1Triticum aestivum kinase18Feuillet, C. 1999. Proc Natl Acad Sci, USA 96: 8265-8270Ed CoeJanuary 25, 2007
mus3mismatch binding protein Mus37.02Franklin, A; Cande, WZ. 2000. Unpublished submission to GenBankEd CoeJanuary 25, 2007
scro1SCARECROW14.08Lim, J et al. 2000. Plant Cell 12:1307-1318Ed CoeJanuary 25, 2007
sig6sigma-like factor65Beardslee, T et al. 2002. Plant J 31:199-209Ed CoeJanuary 25, 2007
yy1yin-yang15.04Xu, T et al. 2001. Proc Natl Acad Sci, USA 98:2295-2300Ed CoeJanuary 25, 2007
zmk1potassium channel18.05Philippar, K et al. 2006. Plant Mol Biol 61: 757-768Ed CoeJanuary 25, 2007
ckb1CK2 regulatory subunit B12.03Riera, M et al. 2001. Plant J 25:365-374Ed CoeJanuary 25, 2007
sig2Bsigma-like factor2B1.03Beardslee, T et al. 2002. Plant J 31:199-209Ed CoeJanuary 25, 2007
rws1RNA recognition water-stress protein12.03Mu, RL et al. 2002. Unpublished submission to GenBankEd CoeJanuary 25, 2007
vacs1vacuolar sorting receptor homolog19.04Paris, N et al. 1997. Plant Physiol 115:29-39Ed CoeJanuary 25, 2007

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Last updated 10:03 am, Aug 23, 2010.

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